RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 ABCA3Q99758 1704 aa32.94■■■□□ 2.86
SSBP4-205ENST00000598159 ROCK2O75116 1388 aaKnown RBP32.93■■■□□ 2.86
SSBP4-205ENST00000598159 VPS72Q15906 364 aa32.91■■■□□ 2.86
SSBP4-205ENST00000598159 CABP2Q9NPB3 220 aa32.91■■■□□ 2.86
SSBP4-205ENST00000598159 TOPAZ1Q8N9V7 1692 aa32.9■■■□□ 2.86
SSBP4-205ENST00000598159 NWD2Q9ULI1 1742 aa32.89■■■□□ 2.86
SSBP4-205ENST00000598159 QRICH2Q9H0J4 1663 aa32.88■■■□□ 2.85
SSBP4-205ENST00000598159 ATAD2Q6PL18 1390 aa32.88■■■□□ 2.85
SSBP4-205ENST00000598159 RALGAPBQ86X10 1494 aa32.87■■■□□ 2.85
SSBP4-205ENST00000598159 EVC2Q86UK5 1308 aa32.86■■■□□ 2.85
SSBP4-205ENST00000598159 PPIP5K1Q6PFW1 1433 aa32.85■■■□□ 2.85
SSBP4-205ENST00000598159 PLCH1Q4KWH8 1693 aa32.85■■■□□ 2.85
SSBP4-205ENST00000598159 CCDC9Q9Y3X0 531 aaKnown RBP32.84■■■□□ 2.85
SSBP4-205ENST00000598159 BTG4Q9NY30 223 aa32.83■■■□□ 2.85
SSBP4-205ENST00000598159 GLI3P10071 1580 aa32.83■■■□□ 2.85
SSBP4-205ENST00000598159 TONSLQ96HA7 1378 aa32.83■■■□□ 2.85
SSBP4-205ENST00000598159 ONECUT3O60422 494 aaPredicted RBP32.81■■■□□ 2.84
SSBP4-205ENST00000598159 ABTB2Q8N961 1025 aa32.81■■■□□ 2.84
SSBP4-205ENST00000598159 CABP1Q9NZU7 370 aa32.81■■■□□ 2.84
SSBP4-205ENST00000598159 COL14A1Q05707 1796 aaKnown RBP32.8■■■□□ 2.84
SSBP4-205ENST00000598159 NUTM2GQ5VZR2 741 aa32.79■■■□□ 2.84
SSBP4-205ENST00000598159 PRDM11Q9NQV5 511 aa32.79■■■□□ 2.84
SSBP4-205ENST00000598159 BRD4O60885 1362 aaPredicted RBP32.79■■■□□ 2.84
SSBP4-205ENST00000598159 CRYBG1Q9Y4K1 1723 aa32.79■■■□□ 2.84
SSBP4-205ENST00000598159 CCDC125Q86Z20 511 aa32.76■■■□□ 2.83
SSBP4-205ENST00000598159 SEPT12Q8IYM1 358 aa32.76■■■□□ 2.83
SSBP4-205ENST00000598159 CARD11Q9BXL7 1154 aa32.76■■■□□ 2.83
SSBP4-205ENST00000598159 NLRP13Q86W25 1043 aa32.75■■■□□ 2.83
SSBP4-205ENST00000598159 KIAA0232Q92628 1395 aa32.72■■■□□ 2.83
SSBP4-205ENST00000598159 ZC3H6P61129 1189 aaKnown RBP32.72■■■□□ 2.83
SSBP4-205ENST00000598159 NRAPQ86VF7 1730 aa32.71■■■□□ 2.83
SSBP4-205ENST00000598159 ZNF692Q9BU19 519 aaPredicted RBP32.71■■■□□ 2.83
SSBP4-205ENST00000598159 CHRNA2Q15822 529 aa32.69■■■□□ 2.82
SSBP4-205ENST00000598159 PHRF1Q9P1Y6 1649 aaKnown RBP32.69■■■□□ 2.82
SSBP4-205ENST00000598159 USP6P35125 1406 aa32.68■■■□□ 2.82
SSBP4-205ENST00000598159 USP19O94966 1318 aa32.67■■■□□ 2.82
SSBP4-205ENST00000598159 SPATA31A5Q5VU36 1347 aa32.67■■■□□ 2.82
SSBP4-205ENST00000598159 SPATA31A7Q8IWB4 1347 aa32.67■■■□□ 2.82
SSBP4-205ENST00000598159 BRWD3Q6RI45 1802 aa32.67■■■□□ 2.82
SSBP4-205ENST00000598159 GCP02774 474 aa32.66■■■□□ 2.82
SSBP4-205ENST00000598159 SBNO2Q9Y2G9 1366 aa32.66■■■□□ 2.82
SSBP4-205ENST00000598159 FAM98CQ17RN3 349 aaKnown RBP32.65■■■□□ 2.82
SSBP4-205ENST00000598159 KRT27Q7Z3Y8 459 aa32.65■■■□□ 2.82
SSBP4-205ENST00000598159 NLRP6P59044 892 aa32.64■■■□□ 2.82
SSBP4-205ENST00000598159 A0A0G2JS52 829 aa32.63■■■□□ 2.81
SSBP4-205ENST00000598159 MYT1Q01538 1121 aa32.63■■■□□ 2.81
SSBP4-205ENST00000598159 CPDO75976 1380 aa32.62■■■□□ 2.81
SSBP4-205ENST00000598159 EVA1CP58658 441 aa32.62■■■□□ 2.81
SSBP4-205ENST00000598159 SSH2Q76I76 1423 aa32.61■■■□□ 2.81
SSBP4-205ENST00000598159 STRN4Q9NRL3 753 aa32.6■■■□□ 2.81
SSBP4-205ENST00000598159 SPATA31A1Q5TZJ5 1347 aa32.58■■■□□ 2.81
SSBP4-205ENST00000598159 NRKQ7Z2Y5 1582 aa32.58■■■□□ 2.81
SSBP4-205ENST00000598159 TTC21BQ7Z4L5 1316 aa32.56■■■□□ 2.8
SSBP4-205ENST00000598159 BLMP54132 1417 aaPredicted RBP32.55■■■□□ 2.8
SSBP4-205ENST00000598159 TTC21AQ8NDW8 1320 aa32.54■■■□□ 2.8
SSBP4-205ENST00000598159 CPSF1Q10570 1443 aaKnown RBP32.54■■■□□ 2.8
SSBP4-205ENST00000598159 PUS7Q96PZ0 661 aaKnown RBP32.54■■■□□ 2.8
SSBP4-205ENST00000598159 AKAP12Q02952 1782 aa32.53■■■□□ 2.8
SSBP4-205ENST00000598159 SF3B2Q13435 895 aaKnown RBP32.53■■■□□ 2.8
SSBP4-205ENST00000598159 EP400Q96L91 3159 aa32.52■■■□□ 2.8
SSBP4-205ENST00000598159 SLC24A1O60721 1099 aa32.52■■■□□ 2.8
SSBP4-205ENST00000598159 KTN1Q86UP2 1357 aaKnown RBP32.52■■■□□ 2.8
SSBP4-205ENST00000598159 CAMTA1Q9Y6Y1 1673 aa32.52■■■□□ 2.8
SSBP4-205ENST00000598159 KCNH5Q8NCM2 988 aa32.49■■■□□ 2.79
SSBP4-205ENST00000598159 SLIT3O75094 1523 aa32.48■■■□□ 2.79
SSBP4-205ENST00000598159 LMO7Q8WWI1 1683 aa32.48■■■□□ 2.79
SSBP4-205ENST00000598159 LARP1Q6PKG0 1096 aaKnown RBP32.48■■■□□ 2.79
SSBP4-205ENST00000598159 BARGINQ6ZT62 677 aa32.48■■■□□ 2.79
SSBP4-205ENST00000598159 TMC1Q8TDI8 760 aa32.48■■■□□ 2.79
SSBP4-205ENST00000598159 PIK3C2AO00443 1686 aa32.47■■■□□ 2.79
SSBP4-205ENST00000598159 ST20-MTHFSA0A0A6YYL1 179 aa32.47■■■□□ 2.79
SSBP4-205ENST00000598159 USP35Q9P2H5 1018 aa32.47■■■□□ 2.79
SSBP4-205ENST00000598159 AATKQ6ZMQ8 1374 aa32.46■■■□□ 2.79
SSBP4-205ENST00000598159 TIMELESSQ9UNS1 1208 aa32.46■■■□□ 2.79
SSBP4-205ENST00000598159 ZBTB7CA1YPR0 619 aa32.45■■■□□ 2.79
SSBP4-205ENST00000598159 HDGFL2Q7Z4V5 671 aaPredicted RBP32.45■■■□□ 2.79
SSBP4-205ENST00000598159 SLC12A5Q9H2X9 1139 aa32.45■■■□□ 2.79
SSBP4-205ENST00000598159 THRAP3Q9Y2W1 955 aaKnown RBP32.45■■■□□ 2.79
SSBP4-205ENST00000598159 THSD7AQ9UPZ6 1657 aa32.45■■■□□ 2.79
SSBP4-205ENST00000598159 TCP11L2Q8N4U5 519 aa32.44■■■□□ 2.78
SSBP4-205ENST00000598159 TESK2Q96S53 571 aa32.44■■■□□ 2.78
SSBP4-205ENST00000598159 ZRANB1Q9UGI0 708 aa32.44■■■□□ 2.78
SSBP4-205ENST00000598159 CLSPNQ9HAW4 1339 aa32.43■■■□□ 2.78
SSBP4-205ENST00000598159 PCGF6Q9BYE7 350 aa32.42■■■□□ 2.78
SSBP4-205ENST00000598159 ARHGEF25Q86VW2 580 aa32.41■■■□□ 2.78
SSBP4-205ENST00000598159 TERF2IPQ9NYB0 399 aa32.41■■■□□ 2.78
SSBP4-205ENST00000598159 DEFB132Q7Z7B7 95 aa32.4■■■□□ 2.78
SSBP4-205ENST00000598159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.4■■■□□ 2.78
SSBP4-205ENST00000598159 COL5A2P05997 1499 aaPredicted RBP32.4■■■□□ 2.78
SSBP4-205ENST00000598159 FAM182BQ5T319 152 aa32.39■■■□□ 2.78
SSBP4-205ENST00000598159 MON2Q7Z3U7 1717 aa32.39■■■□□ 2.78
SSBP4-205ENST00000598159 CD163L1Q9NR16 1453 aa32.38■■■□□ 2.77
SSBP4-205ENST00000598159 FAM196AQ6ZSG2 479 aa32.37■■■□□ 2.77
SSBP4-205ENST00000598159 USP31Q70CQ4 1352 aa32.36■■■□□ 2.77
SSBP4-205ENST00000598159 BAG6P46379 1132 aa32.36■■■□□ 2.77
SSBP4-205ENST00000598159 PDE3BQ13370 1112 aa32.36■■■□□ 2.77
SSBP4-205ENST00000598159 AXIN2Q9Y2T1 843 aa32.36■■■□□ 2.77
SSBP4-205ENST00000598159 CRB1P82279 1406 aa32.35■■■□□ 2.77
SSBP4-205ENST00000598159 SOX12O15370 315 aa32.35■■■□□ 2.77
SSBP4-205ENST00000598159 COL18A1P39060 1754 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms