RNA–Protein interactions for RNA: ENST00000597493.5

C19orf48-208, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 971 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-208ENST00000597493 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
C19orf48-208ENST00000597493 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
C19orf48-208ENST00000597493 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
C19orf48-208ENST00000597493 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
C19orf48-208ENST00000597493 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
C19orf48-208ENST00000597493 FAM83GA6ND36 823 aa17.52■□□□□ 0.4
C19orf48-208ENST00000597493 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.4
C19orf48-208ENST00000597493 CCER1Q8TC90 406 aaPredicted RBP17.52■□□□□ 0.4
C19orf48-208ENST00000597493 SLIT2O94813 1529 aa17.51■□□□□ 0.39
C19orf48-208ENST00000597493 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
C19orf48-208ENST00000597493 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
C19orf48-208ENST00000597493 HAP1P54257 671 aaPredicted RBP17.5■□□□□ 0.39
C19orf48-208ENST00000597493 ATRNO75882 1429 aa17.49■□□□□ 0.39
C19orf48-208ENST00000597493 NLRP13Q86W25 1043 aa17.49■□□□□ 0.39
C19orf48-208ENST00000597493 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
C19orf48-208ENST00000597493 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
C19orf48-208ENST00000597493 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
C19orf48-208ENST00000597493 CPSF1Q10570 1443 aaKnown RBP17.48■□□□□ 0.39
C19orf48-208ENST00000597493 ITSN1Q15811 1721 aa17.48■□□□□ 0.39
C19orf48-208ENST00000597493 GJD4Q96KN9 370 aaPredicted RBP17.48■□□□□ 0.39
C19orf48-208ENST00000597493 USP6P35125 1406 aa17.47■□□□□ 0.39
C19orf48-208ENST00000597493 ALS2Q96Q42 1657 aa17.47■□□□□ 0.39
C19orf48-208ENST00000597493 USP19O94966 1318 aa17.47■□□□□ 0.39
C19orf48-208ENST00000597493 ONECUT3O60422 494 aaPredicted RBP17.46■□□□□ 0.39
C19orf48-208ENST00000597493 VPS72Q15906 364 aa17.46■□□□□ 0.39
C19orf48-208ENST00000597493 GCP02774 474 aa17.44■□□□□ 0.38
C19orf48-208ENST00000597493 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
C19orf48-208ENST00000597493 TTC21AQ8NDW8 1320 aa17.44■□□□□ 0.38
C19orf48-208ENST00000597493 SLC12A5Q9H2X9 1139 aa17.43■□□□□ 0.38
C19orf48-208ENST00000597493 CPDO75976 1380 aa17.42■□□□□ 0.38
C19orf48-208ENST00000597493 USP47Q96K76 1375 aa17.42■□□□□ 0.38
C19orf48-208ENST00000597493 NLRP6P59044 892 aa17.42■□□□□ 0.38
C19orf48-208ENST00000597493 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
C19orf48-208ENST00000597493 TMF1P82094 1093 aa17.41■□□□□ 0.38
C19orf48-208ENST00000597493 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
C19orf48-208ENST00000597493 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
C19orf48-208ENST00000597493 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
C19orf48-208ENST00000597493 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
C19orf48-208ENST00000597493 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
C19orf48-208ENST00000597493 MARF1Q9Y4F3 1742 aaKnown RBP17.4■□□□□ 0.38
C19orf48-208ENST00000597493 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
C19orf48-208ENST00000597493 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
C19orf48-208ENST00000597493 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
C19orf48-208ENST00000597493 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
C19orf48-208ENST00000597493 CD163L1Q9NR16 1453 aa17.38■□□□□ 0.37
C19orf48-208ENST00000597493 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
C19orf48-208ENST00000597493 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
C19orf48-208ENST00000597493 USP31Q70CQ4 1352 aa17.38■□□□□ 0.37
C19orf48-208ENST00000597493 RGS12O14924 1447 aa17.38■□□□□ 0.37
C19orf48-208ENST00000597493 KCNH5Q8NCM2 988 aa17.37■□□□□ 0.37
C19orf48-208ENST00000597493 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37not detected■■■■■ 40.1
C19orf48-208ENST00000597493 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
C19orf48-208ENST00000597493 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
C19orf48-208ENST00000597493 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
C19orf48-208ENST00000597493 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 NWD2Q9ULI1 1742 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 CRYBG1Q9Y4K1 1723 aa17.34■□□□□ 0.37
C19orf48-208ENST00000597493 EDC4Q6P2E9 1401 aaKnown RBP17.33■□□□□ 0.36
C19orf48-208ENST00000597493 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
C19orf48-208ENST00000597493 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
C19orf48-208ENST00000597493 SEPT12Q8IYM1 358 aa17.32■□□□□ 0.36
C19orf48-208ENST00000597493 SLIT3O75094 1523 aa17.31■□□□□ 0.36
C19orf48-208ENST00000597493 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
C19orf48-208ENST00000597493 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
C19orf48-208ENST00000597493 EVA1CP58658 441 aa17.3■□□□□ 0.36
C19orf48-208ENST00000597493 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
C19orf48-208ENST00000597493 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
C19orf48-208ENST00000597493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
C19orf48-208ENST00000597493 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
C19orf48-208ENST00000597493 GLI3P10071 1580 aa17.3■□□□□ 0.36
C19orf48-208ENST00000597493 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
C19orf48-208ENST00000597493 NME9Q86XW9 330 aa17.29■□□□□ 0.36
C19orf48-208ENST00000597493 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
C19orf48-208ENST00000597493 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
C19orf48-208ENST00000597493 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
C19orf48-208ENST00000597493 CAMTA1Q9Y6Y1 1673 aa17.28■□□□□ 0.36
C19orf48-208ENST00000597493 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
C19orf48-208ENST00000597493 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
C19orf48-208ENST00000597493 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
C19orf48-208ENST00000597493 PHRF1Q9P1Y6 1649 aaKnown RBP17.27■□□□□ 0.36
C19orf48-208ENST00000597493 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
C19orf48-208ENST00000597493 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
C19orf48-208ENST00000597493 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
C19orf48-208ENST00000597493 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
C19orf48-208ENST00000597493 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
C19orf48-208ENST00000597493 FYB1O15117 783 aa17.25■□□□□ 0.35
C19orf48-208ENST00000597493 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
C19orf48-208ENST00000597493 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
C19orf48-208ENST00000597493 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
C19orf48-208ENST00000597493 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
C19orf48-208ENST00000597493 NRAPQ86VF7 1730 aa17.24■□□□□ 0.35
C19orf48-208ENST00000597493 LMO7Q8WWI1 1683 aa17.23■□□□□ 0.35
C19orf48-208ENST00000597493 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
C19orf48-208ENST00000597493 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
C19orf48-208ENST00000597493 COG3Q96JB2 828 aa17.22■□□□□ 0.35
C19orf48-208ENST00000597493 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
C19orf48-208ENST00000597493 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms