RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 NUDT16Q96DE0 195 aaKnown RBP23.22■■□□□ 1.31
LINC02560-201ENST00000596379 A0A0G2JS52 829 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 MYT1Q01538 1121 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 SF3B2Q13435 895 aaKnown RBP23.21■■□□□ 1.31
LINC02560-201ENST00000596379 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
LINC02560-201ENST00000596379 COL14A1Q05707 1796 aaKnown RBP23.2■■□□□ 1.3
LINC02560-201ENST00000596379 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
LINC02560-201ENST00000596379 CDK19Q9BWU1 502 aa23.19■■□□□ 1.3
LINC02560-201ENST00000596379 ATP7BP35670 1465 aa23.17■■□□□ 1.3
LINC02560-201ENST00000596379 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
LINC02560-201ENST00000596379 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
LINC02560-201ENST00000596379 PRDM11Q9NQV5 511 aa23.15■■□□□ 1.3
LINC02560-201ENST00000596379 SPATA31A5Q5VU36 1347 aa23.14■■□□□ 1.3
LINC02560-201ENST00000596379 SPATA31A7Q8IWB4 1347 aa23.14■■□□□ 1.3
LINC02560-201ENST00000596379 SRCAPQ6ZRS2 3230 aa23.14■■□□□ 1.29
LINC02560-201ENST00000596379 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
LINC02560-201ENST00000596379 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 KIAA1210Q9ULL0 1709 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
LINC02560-201ENST00000596379 ACEP12821 1306 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
LINC02560-201ENST00000596379 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
LINC02560-201ENST00000596379 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
LINC02560-201ENST00000596379 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
LINC02560-201ENST00000596379 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
LINC02560-201ENST00000596379 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
LINC02560-201ENST00000596379 BAG6P46379 1132 aa23.08■■□□□ 1.29
LINC02560-201ENST00000596379 TOPAZ1Q8N9V7 1692 aa23.07■■□□□ 1.28
LINC02560-201ENST00000596379 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
LINC02560-201ENST00000596379 PHRF1Q9P1Y6 1649 aaKnown RBP23.06■■□□□ 1.28
LINC02560-201ENST00000596379 SPATA31A1Q5TZJ5 1347 aa23.06■■□□□ 1.28
LINC02560-201ENST00000596379 ABTB2Q8N961 1025 aa23.05■■□□□ 1.28
LINC02560-201ENST00000596379 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
LINC02560-201ENST00000596379 THSD7AQ9UPZ6 1657 aa23.03■■□□□ 1.28
LINC02560-201ENST00000596379 EVA1CP58658 441 aa23.02■■□□□ 1.28
LINC02560-201ENST00000596379 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
LINC02560-201ENST00000596379 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
LINC02560-201ENST00000596379 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
LINC02560-201ENST00000596379 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
LINC02560-201ENST00000596379 RGPD1P0DJD0 1748 aa23.01■■□□□ 1.27
LINC02560-201ENST00000596379 PSDA5PKW4 1024 aaPredicted RBP23■■□□□ 1.27
LINC02560-201ENST00000596379 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
LINC02560-201ENST00000596379 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
LINC02560-201ENST00000596379 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 USP19O94966 1318 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
LINC02560-201ENST00000596379 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
LINC02560-201ENST00000596379 FAM196AQ6ZSG2 479 aa22.96■■□□□ 1.27
LINC02560-201ENST00000596379 SSH2Q76I76 1423 aa22.96■■□□□ 1.27
LINC02560-201ENST00000596379 CPDO75976 1380 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 GCP02774 474 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 BARGINQ6ZT62 677 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
LINC02560-201ENST00000596379 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
LINC02560-201ENST00000596379 TRIM37O94972 964 aa22.94■■□□□ 1.26
LINC02560-201ENST00000596379 EZH2Q15910 746 aaKnown RBP22.93■■□□□ 1.26
LINC02560-201ENST00000596379 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
LINC02560-201ENST00000596379 TNS1Q9HBL0 1735 aaKnown RBP22.93■■□□□ 1.26
LINC02560-201ENST00000596379 DISP2A7MBM2 1401 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 PDE3BQ13370 1112 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
LINC02560-201ENST00000596379 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
LINC02560-201ENST00000596379 LMO7Q8WWI1 1683 aa22.91■■□□□ 1.26
LINC02560-201ENST00000596379 LRP5O75197 1615 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 NLRP6P59044 892 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
LINC02560-201ENST00000596379 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
LINC02560-201ENST00000596379 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
LINC02560-201ENST00000596379 APBA3O96018 575 aa22.89■■□□□ 1.25
LINC02560-201ENST00000596379 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
LINC02560-201ENST00000596379 USP6P35125 1406 aa22.88■■□□□ 1.25
LINC02560-201ENST00000596379 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
LINC02560-201ENST00000596379 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
LINC02560-201ENST00000596379 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
LINC02560-201ENST00000596379 COL5A2P05997 1499 aaPredicted RBP22.85■■□□□ 1.25
LINC02560-201ENST00000596379 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
LINC02560-201ENST00000596379 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 SLIT3O75094 1523 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 CRB1P82279 1406 aa22.82■■□□□ 1.24
LINC02560-201ENST00000596379 PARD3Q8TEW0 1356 aa22.81■■□□□ 1.24
LINC02560-201ENST00000596379 ZNF692Q9BU19 519 aaPredicted RBP22.81■■□□□ 1.24
LINC02560-201ENST00000596379 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
LINC02560-201ENST00000596379 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
LINC02560-201ENST00000596379 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
LINC02560-201ENST00000596379 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
LINC02560-201ENST00000596379 AXIN2Q9Y2T1 843 aa22.78■■□□□ 1.24
LINC02560-201ENST00000596379 COL18A1P39060 1754 aa22.78■■□□□ 1.24
LINC02560-201ENST00000596379 AKAP12Q02952 1782 aa22.76■■□□□ 1.23
LINC02560-201ENST00000596379 RREB1Q92766 1687 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 C11orf95C9JLR9 678 aaPredicted RBP22.75■■□□□ 1.23
LINC02560-201ENST00000596379 SOX12O15370 315 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 NBPF14Q5TI25 921 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 KCNH5Q8NCM2 988 aa22.75■■□□□ 1.23
LINC02560-201ENST00000596379 DDB1Q16531 1140 aa22.74■■□□□ 1.23
LINC02560-201ENST00000596379 WDR17Q8IZU2 1322 aa22.73■■□□□ 1.23
LINC02560-201ENST00000596379 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
LINC02560-201ENST00000596379 NUP188Q5SRE5 1749 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms