RNA–Protein interactions for RNA: ENST00000595936.1

LRMDA-211, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-211ENST00000595936 SPATA31A5Q5VU36 1347 aa17.27■□□□□ 0.36
LRMDA-211ENST00000595936 SPATA31A7Q8IWB4 1347 aa17.27■□□□□ 0.36
LRMDA-211ENST00000595936 COL14A1Q05707 1796 aaKnown RBP17.27■□□□□ 0.35
LRMDA-211ENST00000595936 NRAPQ86VF7 1730 aa17.27■□□□□ 0.35
LRMDA-211ENST00000595936 EN1Q05925 392 aaPredicted RBP17.26■□□□□ 0.35
LRMDA-211ENST00000595936 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
LRMDA-211ENST00000595936 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
LRMDA-211ENST00000595936 PRDM11Q9NQV5 511 aa17.23■□□□□ 0.35
LRMDA-211ENST00000595936 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
LRMDA-211ENST00000595936 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
LRMDA-211ENST00000595936 FAM196AQ6ZSG2 479 aa17.22■□□□□ 0.35
LRMDA-211ENST00000595936 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
LRMDA-211ENST00000595936 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
LRMDA-211ENST00000595936 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
LRMDA-211ENST00000595936 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
LRMDA-211ENST00000595936 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
LRMDA-211ENST00000595936 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
LRMDA-211ENST00000595936 THSD7AQ9UPZ6 1657 aa17.2■□□□□ 0.34
LRMDA-211ENST00000595936 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
LRMDA-211ENST00000595936 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
LRMDA-211ENST00000595936 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
LRMDA-211ENST00000595936 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
LRMDA-211ENST00000595936 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
LRMDA-211ENST00000595936 PRR36Q9H6K5 1346 aa17.19■□□□□ 0.34
LRMDA-211ENST00000595936 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
LRMDA-211ENST00000595936 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
LRMDA-211ENST00000595936 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
LRMDA-211ENST00000595936 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
LRMDA-211ENST00000595936 ATP7BP35670 1465 aa17.16■□□□□ 0.34
LRMDA-211ENST00000595936 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
LRMDA-211ENST00000595936 BARGINQ6ZT62 677 aa17.15■□□□□ 0.34
LRMDA-211ENST00000595936 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
LRMDA-211ENST00000595936 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
LRMDA-211ENST00000595936 TRIM37O94972 964 aa17.14■□□□□ 0.33
LRMDA-211ENST00000595936 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
LRMDA-211ENST00000595936 APBA3O96018 575 aa17.13■□□□□ 0.33
LRMDA-211ENST00000595936 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
LRMDA-211ENST00000595936 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
LRMDA-211ENST00000595936 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
LRMDA-211ENST00000595936 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
LRMDA-211ENST00000595936 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
LRMDA-211ENST00000595936 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
LRMDA-211ENST00000595936 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
LRMDA-211ENST00000595936 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
LRMDA-211ENST00000595936 EVA1CP58658 441 aa17.11■□□□□ 0.33
LRMDA-211ENST00000595936 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
LRMDA-211ENST00000595936 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
LRMDA-211ENST00000595936 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
LRMDA-211ENST00000595936 DCAF8L1A6NGE4 600 aa17.09■□□□□ 0.33
LRMDA-211ENST00000595936 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
LRMDA-211ENST00000595936 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
LRMDA-211ENST00000595936 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
LRMDA-211ENST00000595936 THRAP3Q9Y2W1 955 aaKnown RBP17.09■□□□□ 0.33
LRMDA-211ENST00000595936 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
LRMDA-211ENST00000595936 CPDO75976 1380 aa17.08■□□□□ 0.32
LRMDA-211ENST00000595936 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
LRMDA-211ENST00000595936 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.32
LRMDA-211ENST00000595936 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
LRMDA-211ENST00000595936 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
LRMDA-211ENST00000595936 ACEP12821 1306 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 YY1P25490 414 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 SPON1Q9HCB6 807 aa17.05■□□□□ 0.32
LRMDA-211ENST00000595936 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
LRMDA-211ENST00000595936 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
LRMDA-211ENST00000595936 RREB1Q92766 1687 aa17.04■□□□□ 0.32
LRMDA-211ENST00000595936 USP19O94966 1318 aa17.03■□□□□ 0.32
LRMDA-211ENST00000595936 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
LRMDA-211ENST00000595936 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
LRMDA-211ENST00000595936 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
LRMDA-211ENST00000595936 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
LRMDA-211ENST00000595936 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.32
LRMDA-211ENST00000595936 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.32
LRMDA-211ENST00000595936 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
LRMDA-211ENST00000595936 KCNQ2O43526 872 aa17.01■□□□□ 0.31
LRMDA-211ENST00000595936 GCP02774 474 aa17■□□□□ 0.31
LRMDA-211ENST00000595936 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
LRMDA-211ENST00000595936 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
LRMDA-211ENST00000595936 OVOS2A0A0J9YW53 1432 aa16.99■□□□□ 0.31
LRMDA-211ENST00000595936 OVOS2Q6IE36 1432 aa16.99■□□□□ 0.31
LRMDA-211ENST00000595936 TOPAZ1Q8N9V7 1692 aa16.99■□□□□ 0.31
LRMDA-211ENST00000595936 LMO7Q8WWI1 1683 aa16.99■□□□□ 0.31
LRMDA-211ENST00000595936 CRB1P82279 1406 aa16.98■□□□□ 0.31
LRMDA-211ENST00000595936 PLSCR1O15162 318 aa16.98■□□□□ 0.31
LRMDA-211ENST00000595936 COL5A2P05997 1499 aaPredicted RBP16.98■□□□□ 0.31
LRMDA-211ENST00000595936 PARP4Q9UKK3 1724 aaKnown RBP16.97■□□□□ 0.31
LRMDA-211ENST00000595936 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
LRMDA-211ENST00000595936 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
LRMDA-211ENST00000595936 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
LRMDA-211ENST00000595936 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
LRMDA-211ENST00000595936 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
LRMDA-211ENST00000595936 DDB1Q16531 1140 aa16.94■□□□□ 0.3
LRMDA-211ENST00000595936 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
LRMDA-211ENST00000595936 BCL11BQ9C0K0 894 aaPredicted RBP16.94■□□□□ 0.3
LRMDA-211ENST00000595936 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
LRMDA-211ENST00000595936 BCL9O00512 1426 aa16.93■□□□□ 0.3
LRMDA-211ENST00000595936 NLRP6P59044 892 aa16.91■□□□□ 0.3
LRMDA-211ENST00000595936 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms