RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 COL16A1Q07092 1604 aaPredicted RBP29.16■■■□□ 2.26
SCN1B-203ENST00000595652 NSD3Q9BZ95 1437 aa29.15■■■□□ 2.26
SCN1B-203ENST00000595652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.15■■■□□ 2.26
SCN1B-203ENST00000595652 EDC4Q6P2E9 1401 aaKnown RBP29.13■■■□□ 2.25
SCN1B-203ENST00000595652 HSPA1LP34931 641 aa29.13■■■□□ 2.25
SCN1B-203ENST00000595652 LMOD2Q6P5Q4 547 aa29.13■■■□□ 2.25
SCN1B-203ENST00000595652 TTC21BQ7Z4L5 1316 aa29.13■■■□□ 2.25
SCN1B-203ENST00000595652 SSH2Q76I76 1423 aa29.11■■■□□ 2.25
SCN1B-203ENST00000595652 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
SCN1B-203ENST00000595652 ALS2Q96Q42 1657 aa29.1■■■□□ 2.25
SCN1B-203ENST00000595652 TNS3Q68CZ2 1445 aa29.1■■■□□ 2.25
SCN1B-203ENST00000595652 KIF20BQ96Q89 1820 aa29.09■■■□□ 2.25
SCN1B-203ENST00000595652 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
SCN1B-203ENST00000595652 NUTM2GQ5VZR2 741 aa29.08■■■□□ 2.25
SCN1B-203ENST00000595652 SPATA31A3Q5VYP0 1347 aa29.08■■■□□ 2.25
SCN1B-203ENST00000595652 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
SCN1B-203ENST00000595652 PIK3C2AO00443 1686 aa29.08■■■□□ 2.25
SCN1B-203ENST00000595652 LRRC59Q96AG4 307 aaKnown RBP29.07■■■□□ 2.24
SCN1B-203ENST00000595652 TTC21AQ8NDW8 1320 aa29.06■■■□□ 2.24
SCN1B-203ENST00000595652 NME9Q86XW9 330 aa29.06■■■□□ 2.24
SCN1B-203ENST00000595652 KNSTRNQ9Y448 316 aa29.06■■■□□ 2.24
SCN1B-203ENST00000595652 ABTB2Q8N961 1025 aa29.05■■■□□ 2.24
SCN1B-203ENST00000595652 ZRANB1Q9UGI0 708 aa29.04■■■□□ 2.24
SCN1B-203ENST00000595652 CNGB1Q14028 1251 aaPredicted RBP29.02■■■□□ 2.24
SCN1B-203ENST00000595652 PER1O15534 1290 aaPredicted RBP29.01■■■□□ 2.23
SCN1B-203ENST00000595652 ARHGEF10O15013 1369 aa29.01■■■□□ 2.23
SCN1B-203ENST00000595652 CGNL1Q0VF96 1302 aa29■■■□□ 2.23
SCN1B-203ENST00000595652 GGNBP2Q9H3C7 697 aa29■■■□□ 2.23
SCN1B-203ENST00000595652 FYB1O15117 783 aa28.99■■■□□ 2.23
SCN1B-203ENST00000595652 NLRP6P59044 892 aa28.99■■■□□ 2.23
SCN1B-203ENST00000595652 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
SCN1B-203ENST00000595652 MARF1Q9Y4F3 1742 aaKnown RBP28.98■■■□□ 2.23
SCN1B-203ENST00000595652 SHPRHQ149N8 1683 aa28.98■■■□□ 2.23
SCN1B-203ENST00000595652 ANKRD26Q9UPS8 1709 aa28.96■■■□□ 2.23
SCN1B-203ENST00000595652 JCADQ9P266 1359 aa28.96■■■□□ 2.23
SCN1B-203ENST00000595652 COL22A1Q8NFW1 1626 aaPredicted RBP28.95■■■□□ 2.23
SCN1B-203ENST00000595652 CC2D1BQ5T0F9 858 aaKnown RBP28.95■■■□□ 2.22
SCN1B-203ENST00000595652 NLRP13Q86W25 1043 aa28.95■■■□□ 2.22
SCN1B-203ENST00000595652 CABLES1Q8TDN4 633 aa28.95■■■□□ 2.22
SCN1B-203ENST00000595652 USP54Q70EL1 1684 aa28.94■■■□□ 2.22
SCN1B-203ENST00000595652 AMER1Q5JTC6 1135 aaPredicted RBP28.94■■■□□ 2.22
SCN1B-203ENST00000595652 MED1Q15648 1581 aaPredicted RBP28.93■■■□□ 2.22
SCN1B-203ENST00000595652 USP31Q70CQ4 1352 aa28.93■■■□□ 2.22
SCN1B-203ENST00000595652 COG3Q96JB2 828 aa28.93■■■□□ 2.22
SCN1B-203ENST00000595652 ABCA3Q99758 1704 aa28.93■■■□□ 2.22
SCN1B-203ENST00000595652 CRYBG1Q9Y4K1 1723 aa28.93■■■□□ 2.22
SCN1B-203ENST00000595652 PHRF1Q9P1Y6 1649 aaKnown RBP28.92■■■□□ 2.22
SCN1B-203ENST00000595652 OVOS2A0A0J9YW53 1432 aa28.92■■■□□ 2.22
SCN1B-203ENST00000595652 OVOS2Q6IE36 1432 aa28.92■■■□□ 2.22
SCN1B-203ENST00000595652 SOX12O15370 315 aa28.91■■■□□ 2.22
SCN1B-203ENST00000595652 NSD2O96028 1365 aa28.89■■■□□ 2.22
SCN1B-203ENST00000595652 HAP1P54257 671 aaPredicted RBP28.89■■■□□ 2.22
SCN1B-203ENST00000595652 NUTM2BA6NNL0 878 aaPredicted RBP28.88■■■□□ 2.21
SCN1B-203ENST00000595652 NUTM2EB1AL46 878 aaPredicted RBP28.88■■■□□ 2.21
SCN1B-203ENST00000595652 ILDR1Q86SU0 546 aaPredicted RBP28.88■■■□□ 2.21
SCN1B-203ENST00000595652 NUTM2AQ8IVF1 878 aaPredicted RBP28.88■■■□□ 2.21
SCN1B-203ENST00000595652 USP19O94966 1318 aa28.88■■■□□ 2.21
SCN1B-203ENST00000595652 SLIT3O75094 1523 aa28.87■■■□□ 2.21
SCN1B-203ENST00000595652 MORC1Q86VD1 984 aa28.86■■■□□ 2.21
SCN1B-203ENST00000595652 TNNT2P45379 298 aaPredicted RBP28.85■■■□□ 2.21
SCN1B-203ENST00000595652 NPC1L1Q9UHC9 1359 aa28.85■■■□□ 2.21
SCN1B-203ENST00000595652 GCP02774 474 aa28.83■■■□□ 2.21
SCN1B-203ENST00000595652 FBLN1P23142 703 aa28.82■■■□□ 2.2
SCN1B-203ENST00000595652 SPATA31A6Q5VVP1 1343 aa28.81■■■□□ 2.2
SCN1B-203ENST00000595652 ZBTB7CA1YPR0 619 aa28.81■■■□□ 2.2
SCN1B-203ENST00000595652 NFAT5O94916 1531 aa28.8■■■□□ 2.2
SCN1B-203ENST00000595652 ZC3H6P61129 1189 aaKnown RBP28.8■■■□□ 2.2
SCN1B-203ENST00000595652 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
SCN1B-203ENST00000595652 LTN1O94822 1766 aa28.78■■■□□ 2.2
SCN1B-203ENST00000595652 ADAMTS2O95450 1211 aa28.78■■■□□ 2.2
SCN1B-203ENST00000595652 LRP6O75581 1613 aa28.78■■■□□ 2.2
SCN1B-203ENST00000595652 MAP2P11137 1827 aaKnown RBP28.78■■■□□ 2.2
SCN1B-203ENST00000595652 RRS1Q15050 365 aaKnown RBP28.75■■■□□ 2.19
SCN1B-203ENST00000595652 KIAA0232Q92628 1395 aa28.74■■■□□ 2.19
SCN1B-203ENST00000595652 CHRNA2Q15822 529 aa28.72■■■□□ 2.19
SCN1B-203ENST00000595652 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
SCN1B-203ENST00000595652 PARD3Q8TEW0 1356 aa28.72■■■□□ 2.19
SCN1B-203ENST00000595652 MEX3CQ5U5Q3 659 aaKnown RBP28.71■■■□□ 2.19
SCN1B-203ENST00000595652 PRDM11Q9NQV5 511 aa28.71■■■□□ 2.19
SCN1B-203ENST00000595652 MAP3K19Q56UN5 1328 aa28.69■■■□□ 2.18
SCN1B-203ENST00000595652 ANP32CO43423 234 aa28.69■■■□□ 2.18
SCN1B-203ENST00000595652 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
SCN1B-203ENST00000595652 EMILIN1Q9Y6C2 1016 aa28.69■■■□□ 2.18
SCN1B-203ENST00000595652 AATKQ6ZMQ8 1374 aa28.69■■■□□ 2.18
SCN1B-203ENST00000595652 CPDO75976 1380 aa28.68■■■□□ 2.18
SCN1B-203ENST00000595652 PPM1GO15355 546 aaPredicted RBP28.68■■■□□ 2.18
SCN1B-203ENST00000595652 RALBP1Q15311 655 aa28.68■■■□□ 2.18
SCN1B-203ENST00000595652 PRKRIP1Q9H875 184 aaPredicted RBP28.68■■■□□ 2.18
SCN1B-203ENST00000595652 PEAK1Q9H792 1746 aa28.68■■■□□ 2.18
SCN1B-203ENST00000595652 RGPD5Q99666 1765 aa28.67■■■□□ 2.18
SCN1B-203ENST00000595652 POLKQ9UBT6 870 aa28.67■■■□□ 2.18
SCN1B-203ENST00000595652 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
SCN1B-203ENST00000595652 FAM83GA6ND36 823 aa28.66■■■□□ 2.18
SCN1B-203ENST00000595652 AMPHP49418 695 aa28.66■■■□□ 2.18
SCN1B-203ENST00000595652 C8orf37Q96NL8 207 aa28.66■■■□□ 2.18
SCN1B-203ENST00000595652 COL18A1P39060 1754 aa28.65■■■□□ 2.18
SCN1B-203ENST00000595652 PLCH1Q4KWH8 1693 aa28.65■■■□□ 2.18
SCN1B-203ENST00000595652 PPP2R1AP30153 589 aa28.65■■■□□ 2.18
SCN1B-203ENST00000595652 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
SCN1B-203ENST00000595652 LMO7Q8WWI1 1683 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms