RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 PPIP5K1Q6PFW1 1433 aa25.13■■□□□ 1.61
CCDC61-202ENST00000594087 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
CCDC61-202ENST00000594087 BRD4O60885 1362 aaPredicted RBP25.11■■□□□ 1.61
CCDC61-202ENST00000594087 CABLES1Q8TDN4 633 aa25.11■■□□□ 1.61
CCDC61-202ENST00000594087 SLC24A1O60721 1099 aa25.09■■□□□ 1.61
CCDC61-202ENST00000594087 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
CCDC61-202ENST00000594087 SLIT2O94813 1529 aa25.07■■□□□ 1.6
CCDC61-202ENST00000594087 ATAD2Q6PL18 1390 aa25.07■■□□□ 1.6
CCDC61-202ENST00000594087 ATRNO75882 1429 aa25.07■■□□□ 1.6
CCDC61-202ENST00000594087 UNC5CLQ8IV45 518 aa25.07■■□□□ 1.6
CCDC61-202ENST00000594087 CABP1Q9NZU7 370 aa25.07■■□□□ 1.6
CCDC61-202ENST00000594087 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
CCDC61-202ENST00000594087 PLEKHG5O94827 1062 aa25.06■■□□□ 1.6
CCDC61-202ENST00000594087 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.04■■□□□ 1.6
CCDC61-202ENST00000594087 ZNF692Q9BU19 519 aaPredicted RBP25.04■■□□□ 1.6
CCDC61-202ENST00000594087 ABTB2Q8N961 1025 aa25.03■■□□□ 1.6
CCDC61-202ENST00000594087 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
CCDC61-202ENST00000594087 GJD4Q96KN9 370 aaPredicted RBP25.01■■□□□ 1.59
CCDC61-202ENST00000594087 PUS7Q96PZ0 661 aaKnown RBP25.01■■□□□ 1.59
CCDC61-202ENST00000594087 NWD2Q9ULI1 1742 aa25■■□□□ 1.59
CCDC61-202ENST00000594087 FAM83GA6ND36 823 aa25■■□□□ 1.59
CCDC61-202ENST00000594087 USP6P35125 1406 aa25■■□□□ 1.59
CCDC61-202ENST00000594087 RGS12O14924 1447 aa24.99■■□□□ 1.59
CCDC61-202ENST00000594087 NLRP13Q86W25 1043 aa24.99■■□□□ 1.59
CCDC61-202ENST00000594087 CRYBG1Q9Y4K1 1723 aa24.98■■□□□ 1.59
CCDC61-202ENST00000594087 COL14A1Q05707 1796 aaKnown RBP24.96■■□□□ 1.59
CCDC61-202ENST00000594087 ST20-MTHFSA0A0A6YYL1 179 aa24.96■■□□□ 1.59
CCDC61-202ENST00000594087 VPS72Q15906 364 aa24.96■■□□□ 1.59
CCDC61-202ENST00000594087 PRDM11Q9NQV5 511 aa24.96■■□□□ 1.59
CCDC61-202ENST00000594087 PLCH1Q4KWH8 1693 aa24.96■■□□□ 1.59
CCDC61-202ENST00000594087 NUTM2GQ5VZR2 741 aa24.95■■□□□ 1.58
CCDC61-202ENST00000594087 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
CCDC61-202ENST00000594087 SSH2Q76I76 1423 aa24.94■■□□□ 1.58
CCDC61-202ENST00000594087 PHRF1Q9P1Y6 1649 aaKnown RBP24.94■■□□□ 1.58
CCDC61-202ENST00000594087 USP19O94966 1318 aa24.93■■□□□ 1.58
CCDC61-202ENST00000594087 CPSF1Q10570 1443 aaKnown RBP24.93■■□□□ 1.58
CCDC61-202ENST00000594087 TESK2Q96S53 571 aa24.92■■□□□ 1.58
CCDC61-202ENST00000594087 KIAA0232Q92628 1395 aa24.92■■□□□ 1.58
CCDC61-202ENST00000594087 USP47Q96K76 1375 aa24.92■■□□□ 1.58
CCDC61-202ENST00000594087 TTC21AQ8NDW8 1320 aa24.91■■□□□ 1.58
CCDC61-202ENST00000594087 KTN1Q86UP2 1357 aaKnown RBP24.91■■□□□ 1.58
CCDC61-202ENST00000594087 NLRP6P59044 892 aa24.9■■□□□ 1.58
CCDC61-202ENST00000594087 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
CCDC61-202ENST00000594087 CCDC9Q9Y3X0 531 aaKnown RBP24.9■■□□□ 1.58
CCDC61-202ENST00000594087 NINLQ9Y2I6 1382 aa24.9■■□□□ 1.58
CCDC61-202ENST00000594087 TTC21BQ7Z4L5 1316 aa24.89■■□□□ 1.58
CCDC61-202ENST00000594087 GCP02774 474 aa24.89■■□□□ 1.58
CCDC61-202ENST00000594087 ZC3H6P61129 1189 aaKnown RBP24.89■■□□□ 1.58
CCDC61-202ENST00000594087 HDGFL2Q7Z4V5 671 aaPredicted RBP24.89■■□□□ 1.58
CCDC61-202ENST00000594087 AKAP12Q02952 1782 aa24.89■■□□□ 1.57
CCDC61-202ENST00000594087 CPDO75976 1380 aa24.89■■□□□ 1.57
CCDC61-202ENST00000594087 TERF2IPQ9NYB0 399 aa24.88■■□□□ 1.57
CCDC61-202ENST00000594087 GLI3P10071 1580 aa24.88■■□□□ 1.57
CCDC61-202ENST00000594087 TMF1P82094 1093 aa24.87■■□□□ 1.57
CCDC61-202ENST00000594087 UPF1Q92900 1129 aaKnown RBP eCLIP24.87■■□□□ 1.57
CCDC61-202ENST00000594087 NRKQ7Z2Y5 1582 aa24.87■■□□□ 1.57
CCDC61-202ENST00000594087 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
CCDC61-202ENST00000594087 ONECUT3O60422 494 aaPredicted RBP24.85■■□□□ 1.57
CCDC61-202ENST00000594087 CDCA8Q53HL2 280 aa24.85■■□□□ 1.57
CCDC61-202ENST00000594087 KCNH5Q8NCM2 988 aa24.84■■□□□ 1.57
CCDC61-202ENST00000594087 SLC12A5Q9H2X9 1139 aa24.84■■□□□ 1.57
CCDC61-202ENST00000594087 PIK3C2AO00443 1686 aa24.83■■□□□ 1.57
CCDC61-202ENST00000594087 CHRNA2Q15822 529 aa24.83■■□□□ 1.57
CCDC61-202ENST00000594087 MON2Q7Z3U7 1717 aa24.83■■□□□ 1.57
CCDC61-202ENST00000594087 SLIT3O75094 1523 aa24.82■■□□□ 1.56
CCDC61-202ENST00000594087 EVA1CP58658 441 aa24.81■■□□□ 1.56
CCDC61-202ENST00000594087 CD163L1Q9NR16 1453 aa24.81■■□□□ 1.56
CCDC61-202ENST00000594087 SPATA31A5Q5VU36 1347 aa24.81■■□□□ 1.56
CCDC61-202ENST00000594087 SPATA31A7Q8IWB4 1347 aa24.81■■□□□ 1.56
CCDC61-202ENST00000594087 SEPT12Q8IYM1 358 aa24.8■■□□□ 1.56
CCDC61-202ENST00000594087 EDC4Q6P2E9 1401 aaKnown RBP24.79■■□□□ 1.56
CCDC61-202ENST00000594087 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.77■■□□□ 1.56
CCDC61-202ENST00000594087 STRN4Q9NRL3 753 aa24.77■■□□□ 1.56
CCDC61-202ENST00000594087 A0A1W2PP64 1363 aa24.77■■□□□ 1.56
CCDC61-202ENST00000594087 USP31Q70CQ4 1352 aa24.77■■□□□ 1.56
CCDC61-202ENST00000594087 AATKQ6ZMQ8 1374 aa24.76■■□□□ 1.55
CCDC61-202ENST00000594087 LMO7Q8WWI1 1683 aa24.75■■□□□ 1.55
CCDC61-202ENST00000594087 FAM98CQ17RN3 349 aaKnown RBP24.75■■□□□ 1.55
CCDC61-202ENST00000594087 CCDC125Q86Z20 511 aa24.75■■□□□ 1.55
CCDC61-202ENST00000594087 SPATA31A1Q5TZJ5 1347 aa24.75■■□□□ 1.55
CCDC61-202ENST00000594087 CAMTA1Q9Y6Y1 1673 aa24.75■■□□□ 1.55
CCDC61-202ENST00000594087 A0A0G2JS52 829 aa24.74■■□□□ 1.55
CCDC61-202ENST00000594087 MYT1Q01538 1121 aa24.74■■□□□ 1.55
CCDC61-202ENST00000594087 ANKRD36BQ8N2N9 1353 aa24.73■■□□□ 1.55
CCDC61-202ENST00000594087 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
CCDC61-202ENST00000594087 ARHGEF25Q86VW2 580 aa24.72■■□□□ 1.55
CCDC61-202ENST00000594087 ZBTB7CA1YPR0 619 aa24.71■■□□□ 1.55
CCDC61-202ENST00000594087 USP54Q70EL1 1684 aa24.71■■□□□ 1.55
CCDC61-202ENST00000594087 COL5A2P05997 1499 aaPredicted RBP24.7■■□□□ 1.55
CCDC61-202ENST00000594087 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.54
CCDC61-202ENST00000594087 NME9Q86XW9 330 aa24.7■■□□□ 1.54
CCDC61-202ENST00000594087 THRAP3Q9Y2W1 955 aaKnown RBP24.7■■□□□ 1.54
CCDC61-202ENST00000594087 LARP1Q6PKG0 1096 aaKnown RBP24.69■■□□□ 1.54
CCDC61-202ENST00000594087 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
CCDC61-202ENST00000594087 TCP11L2Q8N4U5 519 aa24.68■■□□□ 1.54
CCDC61-202ENST00000594087 BRWD3Q6RI45 1802 aa24.68■■□□□ 1.54
CCDC61-202ENST00000594087 NFAT5O94916 1531 aa24.67■■□□□ 1.54
CCDC61-202ENST00000594087 ABCC6O95255 1503 aa24.67■■□□□ 1.54
CCDC61-202ENST00000594087 SOX12O15370 315 aa24.67■■□□□ 1.54
CCDC61-202ENST00000594087 USP35Q9P2H5 1018 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms