RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 CABLES1Q8TDN4 633 aa28.4■■■□□ 2.14
COPE-204ENST00000593827 PLEKHG5O94827 1062 aa28.38■■■□□ 2.13
COPE-204ENST00000593827 TRPM3Q9HCF6 1732 aaPredicted RBP28.37■■■□□ 2.13
COPE-204ENST00000593827 ATAD2Q6PL18 1390 aa28.37■■■□□ 2.13
COPE-204ENST00000593827 TOPAZ1Q8N9V7 1692 aa28.36■■■□□ 2.13
COPE-204ENST00000593827 UNC5CLQ8IV45 518 aa28.36■■■□□ 2.13
COPE-204ENST00000593827 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
COPE-204ENST00000593827 ATRNO75882 1429 aa28.35■■■□□ 2.13
COPE-204ENST00000593827 BCL9LQ86UU0 1499 aa28.33■■■□□ 2.13
COPE-204ENST00000593827 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
COPE-204ENST00000593827 ZNF692Q9BU19 519 aaPredicted RBP28.32■■■□□ 2.12
COPE-204ENST00000593827 SLIT2O94813 1529 aa28.32■■■□□ 2.12
COPE-204ENST00000593827 ALS2Q96Q42 1657 aa28.32■■■□□ 2.12
COPE-204ENST00000593827 MARF1Q9Y4F3 1742 aaKnown RBP28.32■■■□□ 2.12
COPE-204ENST00000593827 CCER1Q8TC90 406 aaPredicted RBP28.3■■■□□ 2.12
COPE-204ENST00000593827 NLRP13Q86W25 1043 aa28.29■■■□□ 2.12
COPE-204ENST00000593827 GJD4Q96KN9 370 aaPredicted RBP28.29■■■□□ 2.12
COPE-204ENST00000593827 FAM83GA6ND36 823 aa28.27■■■□□ 2.12
COPE-204ENST00000593827 PUS7Q96PZ0 661 aaKnown RBP28.27■■■□□ 2.12
COPE-204ENST00000593827 PRDM11Q9NQV5 511 aa28.26■■■□□ 2.11
COPE-204ENST00000593827 USP6P35125 1406 aa28.26■■■□□ 2.11
COPE-204ENST00000593827 RGS12O14924 1447 aa28.25■■■□□ 2.11
COPE-204ENST00000593827 VPS72Q15906 364 aa28.24■■■□□ 2.11
COPE-204ENST00000593827 NUTM2GQ5VZR2 741 aa28.23■■■□□ 2.11
COPE-204ENST00000593827 ABCA3Q99758 1704 aa28.23■■■□□ 2.11
COPE-204ENST00000593827 ST20-MTHFSA0A0A6YYL1 179 aa28.22■■■□□ 2.11
COPE-204ENST00000593827 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.22■■■□□ 2.11
COPE-204ENST00000593827 CCDC9Q9Y3X0 531 aaKnown RBP28.22■■■□□ 2.11
COPE-204ENST00000593827 BTG4Q9NY30 223 aa28.21■■■□□ 2.11
COPE-204ENST00000593827 USP19O94966 1318 aa28.19■■■□□ 2.1
COPE-204ENST00000593827 TTC21AQ8NDW8 1320 aa28.18■■■□□ 2.1
COPE-204ENST00000593827 NWD2Q9ULI1 1742 aa28.18■■■□□ 2.1
COPE-204ENST00000593827 NLRP6P59044 892 aa28.18■■■□□ 2.1
COPE-204ENST00000593827 HDGFL2Q7Z4V5 671 aaPredicted RBP28.18■■■□□ 2.1
COPE-204ENST00000593827 TMC1Q8TDI8 760 aa28.18■■■□□ 2.1
COPE-204ENST00000593827 KIAA0232Q92628 1395 aa28.17■■■□□ 2.1
COPE-204ENST00000593827 USP47Q96K76 1375 aa28.17■■■□□ 2.1
COPE-204ENST00000593827 COL14A1Q05707 1796 aaKnown RBP28.16■■■□□ 2.1
COPE-204ENST00000593827 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
COPE-204ENST00000593827 ZC3H6P61129 1189 aaKnown RBP28.16■■■□□ 2.1
COPE-204ENST00000593827 TESK2Q96S53 571 aa28.16■■■□□ 2.1
COPE-204ENST00000593827 TERF2IPQ9NYB0 399 aa28.16■■■□□ 2.1
COPE-204ENST00000593827 NINLQ9Y2I6 1382 aa28.15■■■□□ 2.1
COPE-204ENST00000593827 GCP02774 474 aa28.15■■■□□ 2.1
COPE-204ENST00000593827 CPSF1Q10570 1443 aaKnown RBP28.15■■■□□ 2.1
COPE-204ENST00000593827 TTC21BQ7Z4L5 1316 aa28.15■■■□□ 2.1
COPE-204ENST00000593827 CPDO75976 1380 aa28.14■■■□□ 2.1
COPE-204ENST00000593827 TMF1P82094 1093 aa28.14■■■□□ 2.1
COPE-204ENST00000593827 CDCA8Q53HL2 280 aa28.14■■■□□ 2.1
COPE-204ENST00000593827 SSH2Q76I76 1423 aa28.14■■■□□ 2.1
COPE-204ENST00000593827 PLCH1Q4KWH8 1693 aa28.13■■■□□ 2.09
COPE-204ENST00000593827 UPF1Q92900 1129 aaKnown RBP eCLIP28.13■■■□□ 2.09
COPE-204ENST00000593827 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
COPE-204ENST00000593827 KCNH5Q8NCM2 988 aa28.11■■■□□ 2.09
COPE-204ENST00000593827 CHRNA2Q15822 529 aa28.1■■■□□ 2.09
COPE-204ENST00000593827 PHRF1Q9P1Y6 1649 aaKnown RBP28.1■■■□□ 2.09
COPE-204ENST00000593827 EVA1CP58658 441 aa28.09■■■□□ 2.09
COPE-204ENST00000593827 ONECUT3O60422 494 aaPredicted RBP28.08■■■□□ 2.09
COPE-204ENST00000593827 SLC12A5Q9H2X9 1139 aa28.08■■■□□ 2.09
COPE-204ENST00000593827 A0A0G2JS52 829 aa28.06■■■□□ 2.08
COPE-204ENST00000593827 MYT1Q01538 1121 aa28.06■■■□□ 2.08
COPE-204ENST00000593827 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
COPE-204ENST00000593827 GLI3P10071 1580 aa28.06■■■□□ 2.08
COPE-204ENST00000593827 NRKQ7Z2Y5 1582 aa28.06■■■□□ 2.08
COPE-204ENST00000593827 SPATA31A5Q5VU36 1347 aa28.05■■■□□ 2.08
COPE-204ENST00000593827 SPATA31A7Q8IWB4 1347 aa28.05■■■□□ 2.08
COPE-204ENST00000593827 STRN4Q9NRL3 753 aa28.05■■■□□ 2.08
COPE-204ENST00000593827 EDC4Q6P2E9 1401 aaKnown RBP28.03■■■□□ 2.08
COPE-204ENST00000593827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.03■■■□□ 2.08
COPE-204ENST00000593827 AKAP12Q02952 1782 aa28.03■■■□□ 2.08
COPE-204ENST00000593827 SLIT3O75094 1523 aa28.02■■■□□ 2.08
COPE-204ENST00000593827 NRAPQ86VF7 1730 aa28.01■■■□□ 2.07
COPE-204ENST00000593827 FAM98CQ17RN3 349 aaKnown RBP28.01■■■□□ 2.07
COPE-204ENST00000593827 CCDC125Q86Z20 511 aa28.01■■■□□ 2.07
COPE-204ENST00000593827 AATKQ6ZMQ8 1374 aa28■■■□□ 2.07
COPE-204ENST00000593827 ZBTB7CA1YPR0 619 aa28■■■□□ 2.07
COPE-204ENST00000593827 CD163L1Q9NR16 1453 aa28■■■□□ 2.07
COPE-204ENST00000593827 A0A1W2PP64 1363 aa27.99■■■□□ 2.07
COPE-204ENST00000593827 PIK3C2AO00443 1686 aa27.99■■■□□ 2.07
COPE-204ENST00000593827 USP31Q70CQ4 1352 aa27.99■■■□□ 2.07
COPE-204ENST00000593827 SPATA31A1Q5TZJ5 1347 aa27.98■■■□□ 2.07
COPE-204ENST00000593827 KRT27Q7Z3Y8 459 aa27.98■■■□□ 2.07
COPE-204ENST00000593827 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
COPE-204ENST00000593827 EIF4G2P78344 907 aaKnown RBP eCLIP27.95■■■□□ 2.06
COPE-204ENST00000593827 ARHGEF25Q86VW2 580 aa27.95■■■□□ 2.06
COPE-204ENST00000593827 THRAP3Q9Y2W1 955 aaKnown RBP27.95■■■□□ 2.06
COPE-204ENST00000593827 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
COPE-204ENST00000593827 NME9Q86XW9 330 aa27.94■■■□□ 2.06
COPE-204ENST00000593827 CAMTA1Q9Y6Y1 1673 aa27.94■■■□□ 2.06
COPE-204ENST00000593827 SOX12O15370 315 aa27.93■■■□□ 2.06
COPE-204ENST00000593827 BARGINQ6ZT62 677 aa27.93■■■□□ 2.06
COPE-204ENST00000593827 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
COPE-204ENST00000593827 LARP1Q6PKG0 1096 aaKnown RBP27.92■■■□□ 2.06
COPE-204ENST00000593827 USP35Q9P2H5 1018 aa27.91■■■□□ 2.06
COPE-204ENST00000593827 LMO7Q8WWI1 1683 aa27.91■■■□□ 2.06
COPE-204ENST00000593827 COL5A2P05997 1499 aaPredicted RBP27.9■■■□□ 2.06
COPE-204ENST00000593827 SF3B2Q13435 895 aaKnown RBP27.9■■■□□ 2.06
COPE-204ENST00000593827 COG3Q96JB2 828 aa27.89■■■□□ 2.06
COPE-204ENST00000593827 CRB1P82279 1406 aa27.88■■■□□ 2.05
COPE-204ENST00000593827 TOM1L2Q6ZVM7 507 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms