RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
GTF2F1-202ENST00000593678 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
GTF2F1-202ENST00000593678 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
GTF2F1-202ENST00000593678 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
GTF2F1-202ENST00000593678 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
GTF2F1-202ENST00000593678 NRKQ7Z2Y5 1582 aa19.86■□□□□ 0.77
GTF2F1-202ENST00000593678 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
GTF2F1-202ENST00000593678 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
GTF2F1-202ENST00000593678 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
GTF2F1-202ENST00000593678 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
GTF2F1-202ENST00000593678 ATF3P18847 181 aa19.85■□□□□ 0.77
GTF2F1-202ENST00000593678 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
GTF2F1-202ENST00000593678 STRCP1A6NGW2 1772 aa19.82■□□□□ 0.76
GTF2F1-202ENST00000593678 DCCP43146 1447 aa19.81■□□□□ 0.76
GTF2F1-202ENST00000593678 PPM1GO15355 546 aaPredicted RBP19.8■□□□□ 0.76
GTF2F1-202ENST00000593678 MSH6P52701 1360 aa19.8■□□□□ 0.76
GTF2F1-202ENST00000593678 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
GTF2F1-202ENST00000593678 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
GTF2F1-202ENST00000593678 PSME1Q06323 249 aa19.79■□□□□ 0.76
GTF2F1-202ENST00000593678 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
GTF2F1-202ENST00000593678 SSH2Q76I76 1423 aa19.79■□□□□ 0.76
GTF2F1-202ENST00000593678 ZRANB1Q9UGI0 708 aa19.79■□□□□ 0.76
GTF2F1-202ENST00000593678 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
GTF2F1-202ENST00000593678 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.75
GTF2F1-202ENST00000593678 OVOS2Q6IE36 1432 aa19.77■□□□□ 0.75
GTF2F1-202ENST00000593678 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 POLKQ9UBT6 870 aa19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 U2AF1L5P0DN76 240 aaPredicted RBP19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 U2AF1Q01081 240 aaKnown RBP eCLIP19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
GTF2F1-202ENST00000593678 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
GTF2F1-202ENST00000593678 ZNF335Q9H4Z2 1342 aaPredicted RBP19.75■□□□□ 0.75
GTF2F1-202ENST00000593678 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
GTF2F1-202ENST00000593678 U2SURPO15042 1029 aaKnown RBP19.74■□□□□ 0.75
GTF2F1-202ENST00000593678 NLRP6P59044 892 aa19.74■□□□□ 0.75
GTF2F1-202ENST00000593678 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
GTF2F1-202ENST00000593678 USP31Q70CQ4 1352 aa19.74■□□□□ 0.75
GTF2F1-202ENST00000593678 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
GTF2F1-202ENST00000593678 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
GTF2F1-202ENST00000593678 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
GTF2F1-202ENST00000593678 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
GTF2F1-202ENST00000593678 PDE3BQ13370 1112 aa19.73■□□□□ 0.75
GTF2F1-202ENST00000593678 SMG6Q86US8 1419 aaKnown RBP19.73■□□□□ 0.75
GTF2F1-202ENST00000593678 FOXO3O43524 673 aa19.72■□□□□ 0.75
GTF2F1-202ENST00000593678 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
GTF2F1-202ENST00000593678 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
GTF2F1-202ENST00000593678 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
GTF2F1-202ENST00000593678 PIK3C2AO00443 1686 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 MST1RQ04912 1400 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 FBLN1P23142 703 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 RRS1Q15050 365 aaKnown RBP19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 RUNDC1Q96C34 613 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 COL3A1P02461 1466 aaPredicted RBP19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 SOX12O15370 315 aa19.71■□□□□ 0.75
GTF2F1-202ENST00000593678 APAF1O14727 1248 aa19.68■□□□□ 0.74
GTF2F1-202ENST00000593678 NEFMP07197 916 aa19.68■□□□□ 0.74
GTF2F1-202ENST00000593678 NUTM2GQ5VZR2 741 aa19.68■□□□□ 0.74
GTF2F1-202ENST00000593678 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
GTF2F1-202ENST00000593678 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
GTF2F1-202ENST00000593678 NEFLP07196 543 aa19.66■□□□□ 0.74
GTF2F1-202ENST00000593678 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
GTF2F1-202ENST00000593678 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
GTF2F1-202ENST00000593678 AMPHP49418 695 aa19.65■□□□□ 0.74
GTF2F1-202ENST00000593678 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
GTF2F1-202ENST00000593678 LMOD2Q6P5Q4 547 aa19.65■□□□□ 0.74
GTF2F1-202ENST00000593678 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.74
GTF2F1-202ENST00000593678 KCNH5Q8NCM2 988 aa19.63■□□□□ 0.73
GTF2F1-202ENST00000593678 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
GTF2F1-202ENST00000593678 FCHSD2O94868 740 aa19.62■□□□□ 0.73
GTF2F1-202ENST00000593678 MAP3K19Q56UN5 1328 aa19.62■□□□□ 0.73
GTF2F1-202ENST00000593678 FLT4P35916 1363 aa19.62■□□□□ 0.73
GTF2F1-202ENST00000593678 IL13P35225 146 aa19.62■□□□□ 0.73
GTF2F1-202ENST00000593678 TCP11L2Q8N4U5 519 aa19.62■□□□□ 0.73
GTF2F1-202ENST00000593678 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
GTF2F1-202ENST00000593678 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
GTF2F1-202ENST00000593678 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
GTF2F1-202ENST00000593678 NEUROD2Q15784 382 aa19.59■□□□□ 0.73
GTF2F1-202ENST00000593678 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
GTF2F1-202ENST00000593678 MARF1Q9Y4F3 1742 aaKnown RBP19.59■□□□□ 0.73
GTF2F1-202ENST00000593678 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.73
GTF2F1-202ENST00000593678 SUPT16HQ9Y5B9 1047 aaKnown RBP19.58■□□□□ 0.72
GTF2F1-202ENST00000593678 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 HSP90AB2PQ58FF8 381 aa19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 RRP7AQ9Y3A4 280 aaKnown RBP19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 PEAK1Q9H792 1746 aa19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 RTL1A6NKG5 1358 aa19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 ZNF521Q96K83 1311 aa19.57■□□□□ 0.72
GTF2F1-202ENST00000593678 HMOX1P09601 288 aa19.56■□□□□ 0.72
GTF2F1-202ENST00000593678 BRINP3Q76B58 766 aa19.56■□□□□ 0.72
GTF2F1-202ENST00000593678 PLEKHF1Q96S99 279 aa19.56■□□□□ 0.72
GTF2F1-202ENST00000593678 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
GTF2F1-202ENST00000593678 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
GTF2F1-202ENST00000593678 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
GTF2F1-202ENST00000593678 RSPH6AQ9H0K4 717 aa19.55■□□□□ 0.72
GTF2F1-202ENST00000593678 WWC1Q8IX03 1113 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms