RNA–Protein interactions for RNA: ENST00000593176.1

NLE1-207, Transcript of notchless homolog 1, humanhuman

TSL 3

Gene NLE1, Length 800 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-207ENST00000593176 KRT27Q7Z3Y8 459 aa22.7■■□□□ 1.22
NLE1-207ENST00000593176 NBPF1Q3BBV0 1214 aa22.68■■□□□ 1.22
NLE1-207ENST00000593176 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
NLE1-207ENST00000593176 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
NLE1-207ENST00000593176 ARHGEF28Q8N1W1 1705 aaKnown RBP22.68■■□□□ 1.22
NLE1-207ENST00000593176 SPATA31A5Q5VU36 1347 aa22.67■■□□□ 1.22
NLE1-207ENST00000593176 SPATA31A7Q8IWB4 1347 aa22.67■■□□□ 1.22
NLE1-207ENST00000593176 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
NLE1-207ENST00000593176 NBPF8Q3BBV2 869 aa22.66■■□□□ 1.22
NLE1-207ENST00000593176 COL14A1Q05707 1796 aaKnown RBP22.65■■□□□ 1.22
NLE1-207ENST00000593176 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
NLE1-207ENST00000593176 ACEP12821 1306 aa22.64■■□□□ 1.22
NLE1-207ENST00000593176 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
NLE1-207ENST00000593176 KIAA1210Q9ULL0 1709 aa22.64■■□□□ 1.21
NLE1-207ENST00000593176 DEFB132Q7Z7B7 95 aa22.63■■□□□ 1.21
NLE1-207ENST00000593176 PRDM11Q9NQV5 511 aa22.63■■□□□ 1.21
NLE1-207ENST00000593176 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
NLE1-207ENST00000593176 KIAA0232Q92628 1395 aa22.62■■□□□ 1.21
NLE1-207ENST00000593176 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
NLE1-207ENST00000593176 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
NLE1-207ENST00000593176 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
NLE1-207ENST00000593176 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
NLE1-207ENST00000593176 TOPAZ1Q8N9V7 1692 aa22.58■■□□□ 1.2
NLE1-207ENST00000593176 USP19O94966 1318 aa22.57■■□□□ 1.2
NLE1-207ENST00000593176 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
NLE1-207ENST00000593176 CPDO75976 1380 aa22.56■■□□□ 1.2
NLE1-207ENST00000593176 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
NLE1-207ENST00000593176 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
NLE1-207ENST00000593176 ZC3H6P61129 1189 aaKnown RBP22.55■■□□□ 1.2
NLE1-207ENST00000593176 CHRNA2Q15822 529 aa22.55■■□□□ 1.2
NLE1-207ENST00000593176 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
NLE1-207ENST00000593176 A0A0G2JS52 829 aa22.54■■□□□ 1.2
NLE1-207ENST00000593176 MYT1Q01538 1121 aa22.54■■□□□ 1.2
NLE1-207ENST00000593176 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
NLE1-207ENST00000593176 THSD7AQ9UPZ6 1657 aa22.54■■□□□ 1.2
NLE1-207ENST00000593176 SRPK2P78362 688 aaKnown RBP22.53■■□□□ 1.2
NLE1-207ENST00000593176 PPIP5K1Q6PFW1 1433 aa22.53■■□□□ 1.2
NLE1-207ENST00000593176 BAG6P46379 1132 aa22.52■■□□□ 1.2
NLE1-207ENST00000593176 CABP2Q9NPB3 220 aa22.52■■□□□ 1.2
NLE1-207ENST00000593176 DISP2A7MBM2 1401 aa22.51■■□□□ 1.19
NLE1-207ENST00000593176 BARGINQ6ZT62 677 aa22.51■■□□□ 1.19
NLE1-207ENST00000593176 PHRF1Q9P1Y6 1649 aaKnown RBP22.5■■□□□ 1.19
NLE1-207ENST00000593176 GCP02774 474 aa22.5■■□□□ 1.19
NLE1-207ENST00000593176 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
NLE1-207ENST00000593176 SSH2Q76I76 1423 aa22.49■■□□□ 1.19
NLE1-207ENST00000593176 FAM182BQ5T319 152 aa22.49■■□□□ 1.19
NLE1-207ENST00000593176 STRN4Q9NRL3 753 aa22.48■■□□□ 1.19
NLE1-207ENST00000593176 CABP1Q9NZU7 370 aa22.48■■□□□ 1.19
NLE1-207ENST00000593176 CAMTA1Q9Y6Y1 1673 aa22.48■■□□□ 1.19
NLE1-207ENST00000593176 NRKQ7Z2Y5 1582 aa22.47■■□□□ 1.19
NLE1-207ENST00000593176 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
NLE1-207ENST00000593176 LARP1Q6PKG0 1096 aaKnown RBP22.46■■□□□ 1.19
NLE1-207ENST00000593176 FAM196AQ6ZSG2 479 aa22.46■■□□□ 1.19
NLE1-207ENST00000593176 USP6P35125 1406 aa22.46■■□□□ 1.19
NLE1-207ENST00000593176 EVA1CP58658 441 aa22.45■■□□□ 1.18
NLE1-207ENST00000593176 EN1Q05925 392 aaPredicted RBP22.44■■□□□ 1.18
NLE1-207ENST00000593176 EVC2Q86UK5 1308 aa22.44■■□□□ 1.18
NLE1-207ENST00000593176 LMO7Q8WWI1 1683 aa22.44■■□□□ 1.18
NLE1-207ENST00000593176 THRAP3Q9Y2W1 955 aaKnown RBP22.44■■□□□ 1.18
NLE1-207ENST00000593176 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
NLE1-207ENST00000593176 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
NLE1-207ENST00000593176 CAMKK2Q96RR4 588 aa22.41■■□□□ 1.18
NLE1-207ENST00000593176 USP35Q9P2H5 1018 aa22.41■■□□□ 1.18
NLE1-207ENST00000593176 SLIT3O75094 1523 aa22.4■■□□□ 1.18
NLE1-207ENST00000593176 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
NLE1-207ENST00000593176 NLRP6P59044 892 aa22.39■■□□□ 1.17
NLE1-207ENST00000593176 ZNF692Q9BU19 519 aaPredicted RBP22.39■■□□□ 1.17
NLE1-207ENST00000593176 QRICH2Q9H0J4 1663 aa22.39■■□□□ 1.17
NLE1-207ENST00000593176 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
NLE1-207ENST00000593176 TRIM37O94972 964 aa22.38■■□□□ 1.17
NLE1-207ENST00000593176 TRPM1Q7Z4N2 1603 aa22.38■■□□□ 1.17
NLE1-207ENST00000593176 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
NLE1-207ENST00000593176 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
NLE1-207ENST00000593176 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
NLE1-207ENST00000593176 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
NLE1-207ENST00000593176 PSDA5PKW4 1024 aaPredicted RBP22.36■■□□□ 1.17
NLE1-207ENST00000593176 EZH2Q15910 746 aaKnown RBP22.36■■□□□ 1.17
NLE1-207ENST00000593176 CRB1P82279 1406 aa22.36■■□□□ 1.17
NLE1-207ENST00000593176 LRP5O75197 1615 aa22.35■■□□□ 1.17
NLE1-207ENST00000593176 CPSF1Q10570 1443 aaKnown RBP22.35■■□□□ 1.17
NLE1-207ENST00000593176 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
NLE1-207ENST00000593176 TTC21BQ7Z4L5 1316 aa22.34■■□□□ 1.17
NLE1-207ENST00000593176 SBNO2Q9Y2G9 1366 aa22.34■■□□□ 1.17
NLE1-207ENST00000593176 C11orf95C9JLR9 678 aaPredicted RBP22.33■■□□□ 1.17
NLE1-207ENST00000593176 APBA3O96018 575 aa22.33■■□□□ 1.17
NLE1-207ENST00000593176 ARHGEF25Q86VW2 580 aa22.33■■□□□ 1.17
NLE1-207ENST00000593176 R3HDM1Q15032 1099 aaKnown RBP22.32■■□□□ 1.16
NLE1-207ENST00000593176 AXIN2Q9Y2T1 843 aa22.32■■□□□ 1.16
NLE1-207ENST00000593176 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
NLE1-207ENST00000593176 KCNH5Q8NCM2 988 aa22.3■■□□□ 1.16
NLE1-207ENST00000593176 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
NLE1-207ENST00000593176 WDR17Q8IZU2 1322 aa22.29■■□□□ 1.16
NLE1-207ENST00000593176 PARP4Q9UKK3 1724 aaKnown RBP22.26■■□□□ 1.15
NLE1-207ENST00000593176 KTN1Q86UP2 1357 aaKnown RBP22.25■■□□□ 1.15
NLE1-207ENST00000593176 COL18A1P39060 1754 aa22.25■■□□□ 1.15
NLE1-207ENST00000593176 TOM1L2Q6ZVM7 507 aa22.25■■□□□ 1.15
NLE1-207ENST00000593176 CDCA7Q9BWT1 371 aaPredicted RBP22.25■■□□□ 1.15
NLE1-207ENST00000593176 USP31Q70CQ4 1352 aa22.25■■□□□ 1.15
NLE1-207ENST00000593176 OVOS2A0A0G2JMS6 1433 aa22.24■■□□□ 1.15
NLE1-207ENST00000593176 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms