RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
DNMT1-229ENST00000593049 USP47Q96K76 1375 aa23.13■■□□□ 1.29
DNMT1-229ENST00000593049 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
DNMT1-229ENST00000593049 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
DNMT1-229ENST00000593049 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
DNMT1-229ENST00000593049 TESK2Q96S53 571 aa23.08■■□□□ 1.29
DNMT1-229ENST00000593049 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
DNMT1-229ENST00000593049 USP6P35125 1406 aa23.07■■□□□ 1.28
DNMT1-229ENST00000593049 USP21Q9UK80 565 aa23.06■■□□□ 1.28
DNMT1-229ENST00000593049 AKAP12Q02952 1782 aa23.05■■□□□ 1.28
DNMT1-229ENST00000593049 SOCS7O14512 581 aa23.04■■□□□ 1.28
DNMT1-229ENST00000593049 RXRBP28702 533 aa23.04■■□□□ 1.28
DNMT1-229ENST00000593049 TMF1P82094 1093 aa23.04■■□□□ 1.28
DNMT1-229ENST00000593049 ABTB2Q8N961 1025 aa23.04■■□□□ 1.28
DNMT1-229ENST00000593049 QTRT2Q9H974 415 aaKnown RBP23.04■■□□□ 1.28
DNMT1-229ENST00000593049 NINLQ9Y2I6 1382 aa23.03■■□□□ 1.28
DNMT1-229ENST00000593049 CRYBG1Q9Y4K1 1723 aa23.03■■□□□ 1.28
DNMT1-229ENST00000593049 PLEKHG5O94827 1062 aa23.03■■□□□ 1.28
DNMT1-229ENST00000593049 CPSF1Q10570 1443 aaKnown RBP23.02■■□□□ 1.28
DNMT1-229ENST00000593049 CDCA8Q53HL2 280 aa23.02■■□□□ 1.28
DNMT1-229ENST00000593049 NLRP13Q86W25 1043 aa23.02■■□□□ 1.28
DNMT1-229ENST00000593049 TRPC5Q9UL62 973 aaPredicted RBP23.02■■□□□ 1.28
DNMT1-229ENST00000593049 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
DNMT1-229ENST00000593049 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
DNMT1-229ENST00000593049 SLIT2O94813 1529 aa23.01■■□□□ 1.27
DNMT1-229ENST00000593049 SSH2Q76I76 1423 aa23■■□□□ 1.27
DNMT1-229ENST00000593049 NWD2Q9ULI1 1742 aa23■■□□□ 1.27
DNMT1-229ENST00000593049 HDGFL2Q7Z4V5 671 aaPredicted RBP23■■□□□ 1.27
DNMT1-229ENST00000593049 TTC21AQ8NDW8 1320 aa23■■□□□ 1.27
DNMT1-229ENST00000593049 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
DNMT1-229ENST00000593049 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
DNMT1-229ENST00000593049 BCL9LQ86UU0 1499 aa22.99■■□□□ 1.27
DNMT1-229ENST00000593049 CDK12Q9NYV4 1490 aaPredicted RBP22.99■■□□□ 1.27
DNMT1-229ENST00000593049 RBM6P78332 1123 aaKnown RBP22.99■■□□□ 1.27
DNMT1-229ENST00000593049 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
DNMT1-229ENST00000593049 MON2Q7Z3U7 1717 aa22.99■■□□□ 1.27
DNMT1-229ENST00000593049 NUTM2GQ5VZR2 741 aa22.98■■□□□ 1.27
DNMT1-229ENST00000593049 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
DNMT1-229ENST00000593049 COL14A1Q05707 1796 aaKnown RBP22.98■■□□□ 1.27
DNMT1-229ENST00000593049 ATRNO75882 1429 aa22.98■■□□□ 1.27
DNMT1-229ENST00000593049 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
DNMT1-229ENST00000593049 USP19O94966 1318 aa22.97■■□□□ 1.27
DNMT1-229ENST00000593049 TTC21BQ7Z4L5 1316 aa22.97■■□□□ 1.27
DNMT1-229ENST00000593049 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
DNMT1-229ENST00000593049 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
DNMT1-229ENST00000593049 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
DNMT1-229ENST00000593049 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
DNMT1-229ENST00000593049 CD163L1Q9NR16 1453 aa22.94■■□□□ 1.26
DNMT1-229ENST00000593049 NLRP6P59044 892 aa22.94■■□□□ 1.26
DNMT1-229ENST00000593049 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
DNMT1-229ENST00000593049 PIK3C2AO00443 1686 aa22.93■■□□□ 1.26
DNMT1-229ENST00000593049 EDC4Q6P2E9 1401 aaKnown RBP22.92■■□□□ 1.26
DNMT1-229ENST00000593049 CPDO75976 1380 aa22.91■■□□□ 1.26
DNMT1-229ENST00000593049 KIAA0232Q92628 1395 aa22.91■■□□□ 1.26
DNMT1-229ENST00000593049 GCP02774 474 aa22.91■■□□□ 1.26
DNMT1-229ENST00000593049 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
DNMT1-229ENST00000593049 GJD4Q96KN9 370 aaPredicted RBP22.9■■□□□ 1.26
DNMT1-229ENST00000593049 SLIT3O75094 1523 aa22.9■■□□□ 1.26
DNMT1-229ENST00000593049 ZC3H6P61129 1189 aaKnown RBP22.89■■□□□ 1.25
DNMT1-229ENST00000593049 VPS72Q15906 364 aa22.89■■□□□ 1.25
DNMT1-229ENST00000593049 BTG4Q9NY30 223 aa22.89■■□□□ 1.25
DNMT1-229ENST00000593049 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.25
DNMT1-229ENST00000593049 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
DNMT1-229ENST00000593049 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
DNMT1-229ENST00000593049 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
DNMT1-229ENST00000593049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.86■■□□□ 1.25
DNMT1-229ENST00000593049 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
DNMT1-229ENST00000593049 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
DNMT1-229ENST00000593049 RGS12O14924 1447 aa22.85■■□□□ 1.25
DNMT1-229ENST00000593049 CCDC9Q9Y3X0 531 aaKnown RBP22.84■■□□□ 1.25
DNMT1-229ENST00000593049 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
DNMT1-229ENST00000593049 GLI3P10071 1580 aa22.82■■□□□ 1.24
DNMT1-229ENST00000593049 NME9Q86XW9 330 aa22.81■■□□□ 1.24
DNMT1-229ENST00000593049 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
DNMT1-229ENST00000593049 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
DNMT1-229ENST00000593049 MYOM1P52179 1685 aa22.8■■□□□ 1.24
DNMT1-229ENST00000593049 EVA1CP58658 441 aa22.79■■□□□ 1.24
DNMT1-229ENST00000593049 NFAT5O94916 1531 aa22.78■■□□□ 1.24
DNMT1-229ENST00000593049 CAMTA1Q9Y6Y1 1673 aa22.77■■□□□ 1.24
DNMT1-229ENST00000593049 ARHGEF25Q86VW2 580 aa22.77■■□□□ 1.24
DNMT1-229ENST00000593049 SPATA31A5Q5VU36 1347 aa22.77■■□□□ 1.24
DNMT1-229ENST00000593049 SPATA31A7Q8IWB4 1347 aa22.77■■□□□ 1.24
DNMT1-229ENST00000593049 ABCC6O95255 1503 aa22.77■■□□□ 1.24
DNMT1-229ENST00000593049 OVOS2A0A0J9YW53 1432 aa22.76■■□□□ 1.23
DNMT1-229ENST00000593049 OVOS2Q6IE36 1432 aa22.76■■□□□ 1.23
DNMT1-229ENST00000593049 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
DNMT1-229ENST00000593049 STRN4Q9NRL3 753 aa22.76■■□□□ 1.23
DNMT1-229ENST00000593049 ZBTB7CA1YPR0 619 aa22.75■■□□□ 1.23
DNMT1-229ENST00000593049 COG3Q96JB2 828 aa22.75■■□□□ 1.23
DNMT1-229ENST00000593049 ZRANB1Q9UGI0 708 aa22.75■■□□□ 1.23
DNMT1-229ENST00000593049 SOX12O15370 315 aa22.74■■□□□ 1.23
DNMT1-229ENST00000593049 POLR3GLQ9BT43 218 aa22.74■■□□□ 1.23
DNMT1-229ENST00000593049 COL18A1P39060 1754 aa22.73■■□□□ 1.23
DNMT1-229ENST00000593049 COL5A2P05997 1499 aaPredicted RBP22.73■■□□□ 1.23
DNMT1-229ENST00000593049 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
DNMT1-229ENST00000593049 SEPT12Q8IYM1 358 aa22.72■■□□□ 1.23
DNMT1-229ENST00000593049 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
DNMT1-229ENST00000593049 FAM98CQ17RN3 349 aaKnown RBP22.7■■□□□ 1.22
DNMT1-229ENST00000593049 LTN1O94822 1766 aa22.69■■□□□ 1.22
DNMT1-229ENST00000593049 NSD3Q9BZ95 1437 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms