RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
DDX39A-218ENST00000592632 ALS2Q96Q42 1657 aa18.26■□□□□ 0.51
DDX39A-218ENST00000592632 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
DDX39A-218ENST00000592632 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
DDX39A-218ENST00000592632 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
DDX39A-218ENST00000592632 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
DDX39A-218ENST00000592632 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
DDX39A-218ENST00000592632 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
DDX39A-218ENST00000592632 BRD4O60885 1362 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-218ENST00000592632 TMF1P82094 1093 aa18.23■□□□□ 0.51
DDX39A-218ENST00000592632 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
DDX39A-218ENST00000592632 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
DDX39A-218ENST00000592632 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
DDX39A-218ENST00000592632 USP6P35125 1406 aa18.23■□□□□ 0.51
DDX39A-218ENST00000592632 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
DDX39A-218ENST00000592632 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
DDX39A-218ENST00000592632 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
DDX39A-218ENST00000592632 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
DDX39A-218ENST00000592632 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDX39A-218ENST00000592632 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
DDX39A-218ENST00000592632 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-218ENST00000592632 RGS12O14924 1447 aa18.2■□□□□ 0.5
DDX39A-218ENST00000592632 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
DDX39A-218ENST00000592632 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
DDX39A-218ENST00000592632 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
DDX39A-218ENST00000592632 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
DDX39A-218ENST00000592632 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
DDX39A-218ENST00000592632 KTN1Q86UP2 1357 aaKnown RBP18.18■□□□□ 0.5
DDX39A-218ENST00000592632 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
DDX39A-218ENST00000592632 USP21Q9UK80 565 aa18.18■□□□□ 0.5
DDX39A-218ENST00000592632 NLRP13Q86W25 1043 aa18.17■□□□□ 0.5
DDX39A-218ENST00000592632 ABCA3Q99758 1704 aa18.17■□□□□ 0.5
DDX39A-218ENST00000592632 NLRP6P59044 892 aa18.16■□□□□ 0.5
DDX39A-218ENST00000592632 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
DDX39A-218ENST00000592632 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
DDX39A-218ENST00000592632 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
DDX39A-218ENST00000592632 USP19O94966 1318 aa18.16■□□□□ 0.5
DDX39A-218ENST00000592632 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
DDX39A-218ENST00000592632 BCL9LQ86UU0 1499 aa18.15■□□□□ 0.5
DDX39A-218ENST00000592632 TTC21AQ8NDW8 1320 aa18.14■□□□□ 0.49
DDX39A-218ENST00000592632 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
DDX39A-218ENST00000592632 SLIT2O94813 1529 aa18.13■□□□□ 0.49
DDX39A-218ENST00000592632 GCP02774 474 aa18.13■□□□□ 0.49
DDX39A-218ENST00000592632 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
DDX39A-218ENST00000592632 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
DDX39A-218ENST00000592632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.49
DDX39A-218ENST00000592632 A0A1W2PP64 1363 aa18.13■□□□□ 0.49
DDX39A-218ENST00000592632 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
DDX39A-218ENST00000592632 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
DDX39A-218ENST00000592632 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
DDX39A-218ENST00000592632 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
DDX39A-218ENST00000592632 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
DDX39A-218ENST00000592632 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
DDX39A-218ENST00000592632 ATRNO75882 1429 aa18.1■□□□□ 0.49
DDX39A-218ENST00000592632 NME9Q86XW9 330 aa18.1■□□□□ 0.49
DDX39A-218ENST00000592632 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
DDX39A-218ENST00000592632 PHRF1Q9P1Y6 1649 aaKnown RBP18.09■□□□□ 0.49
DDX39A-218ENST00000592632 NRKQ7Z2Y5 1582 aa18.09■□□□□ 0.49
DDX39A-218ENST00000592632 EDC4Q6P2E9 1401 aaKnown RBP18.09■□□□□ 0.49
DDX39A-218ENST00000592632 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
DDX39A-218ENST00000592632 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
DDX39A-218ENST00000592632 BTG4Q9NY30 223 aa18.09■□□□□ 0.49
DDX39A-218ENST00000592632 USP31Q70CQ4 1352 aa18.08■□□□□ 0.49
DDX39A-218ENST00000592632 CPDO75976 1380 aa18.07■□□□□ 0.48
DDX39A-218ENST00000592632 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
DDX39A-218ENST00000592632 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
DDX39A-218ENST00000592632 VPS72Q15906 364 aa18.06■□□□□ 0.48
DDX39A-218ENST00000592632 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
DDX39A-218ENST00000592632 SLIT3O75094 1523 aa18.06■□□□□ 0.48
DDX39A-218ENST00000592632 COL14A1Q05707 1796 aaKnown RBP18.06■□□□□ 0.48
DDX39A-218ENST00000592632 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
DDX39A-218ENST00000592632 PLCH1Q4KWH8 1693 aa18.06■□□□□ 0.48
DDX39A-218ENST00000592632 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.05■□□□□ 0.48
DDX39A-218ENST00000592632 ARHGEF25Q86VW2 580 aa18.04■□□□□ 0.48
DDX39A-218ENST00000592632 KCNH5Q8NCM2 988 aa18.04■□□□□ 0.48
DDX39A-218ENST00000592632 MYOM1P52179 1685 aa18.03■□□□□ 0.48
DDX39A-218ENST00000592632 FYB1O15117 783 aa18.02■□□□□ 0.48
DDX39A-218ENST00000592632 SOX12O15370 315 aa18.02■□□□□ 0.48
DDX39A-218ENST00000592632 CAMTA1Q9Y6Y1 1673 aa18.01■□□□□ 0.47
DDX39A-218ENST00000592632 NRAPQ86VF7 1730 aa18.01■□□□□ 0.47
DDX39A-218ENST00000592632 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
DDX39A-218ENST00000592632 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
DDX39A-218ENST00000592632 AATKQ6ZMQ8 1374 aa18■□□□□ 0.47
DDX39A-218ENST00000592632 USP54Q70EL1 1684 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 OVOS2A0A0J9YW53 1432 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 OVOS2Q6IE36 1432 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 ONECUT3O60422 494 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-218ENST00000592632 EVA1CP58658 441 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 PANK3Q9H999 370 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 CCDC9Q9Y3X0 531 aaKnown RBP17.99■□□□□ 0.47
DDX39A-218ENST00000592632 GLI3P10071 1580 aa17.99■□□□□ 0.47
DDX39A-218ENST00000592632 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 NFAT5O94916 1531 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 COG3Q96JB2 828 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
DDX39A-218ENST00000592632 COL18A1P39060 1754 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms