RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SPATA31A5Q5VU36 1347 aa29■■■□□ 2.23
PRKCSH-216ENST00000592445 SPATA31A7Q8IWB4 1347 aa29■■■□□ 2.23
PRKCSH-216ENST00000592445 PAK3O75914 559 aaPredicted RBP29■■■□□ 2.23
PRKCSH-216ENST00000592445 NGDNQ8NEJ9 315 aaKnown RBP28.99■■■□□ 2.23
PRKCSH-216ENST00000592445 PRR36Q9H6K5 1346 aa28.98■■■□□ 2.23
PRKCSH-216ENST00000592445 PRDM11Q9NQV5 511 aa28.98■■■□□ 2.23
PRKCSH-216ENST00000592445 ALS2Q96Q42 1657 aa28.98■■■□□ 2.23
PRKCSH-216ENST00000592445 RGPD1P0DJD0 1748 aa28.97■■■□□ 2.23
PRKCSH-216ENST00000592445 R3HDM1Q15032 1099 aaKnown RBP28.97■■■□□ 2.23
PRKCSH-216ENST00000592445 WASLO00401 505 aaPredicted RBP28.95■■■□□ 2.22
PRKCSH-216ENST00000592445 ADGRB1O14514 1584 aa28.95■■■□□ 2.22
PRKCSH-216ENST00000592445 TULP4Q9NRJ4 1543 aa28.94■■■□□ 2.22
PRKCSH-216ENST00000592445 KDM2AQ9Y2K7 1162 aa28.92■■■□□ 2.22
PRKCSH-216ENST00000592445 DISP2A7MBM2 1401 aa28.9■■■□□ 2.22
PRKCSH-216ENST00000592445 EZH2Q15910 746 aaKnown RBP28.9■■■□□ 2.22
PRKCSH-216ENST00000592445 THSD7AQ9UPZ6 1657 aa28.89■■■□□ 2.22
PRKCSH-216ENST00000592445 STRN4Q9NRL3 753 aa28.89■■■□□ 2.22
PRKCSH-216ENST00000592445 SPATA31A1Q5TZJ5 1347 aa28.88■■■□□ 2.21
PRKCSH-216ENST00000592445 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
PRKCSH-216ENST00000592445 TRIM37O94972 964 aa28.87■■■□□ 2.21
PRKCSH-216ENST00000592445 CHRNA2Q15822 529 aa28.87■■■□□ 2.21
PRKCSH-216ENST00000592445 FAM196AQ6ZSG2 479 aa28.87■■■□□ 2.21
PRKCSH-216ENST00000592445 DCAF11Q8TEB1 546 aa28.87■■■□□ 2.21
PRKCSH-216ENST00000592445 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
PRKCSH-216ENST00000592445 TNS1Q9HBL0 1735 aaKnown RBP28.85■■■□□ 2.21
PRKCSH-216ENST00000592445 NUDT16Q96DE0 195 aaKnown RBP28.83■■■□□ 2.21
PRKCSH-216ENST00000592445 CAMKK2Q96RR4 588 aa28.83■■■□□ 2.21
PRKCSH-216ENST00000592445 USP35Q9P2H5 1018 aa28.83■■■□□ 2.21
PRKCSH-216ENST00000592445 APBA3O96018 575 aa28.82■■■□□ 2.2
PRKCSH-216ENST00000592445 ZC3H6P61129 1189 aaKnown RBP28.82■■■□□ 2.2
PRKCSH-216ENST00000592445 EVA1CP58658 441 aa28.81■■■□□ 2.2
PRKCSH-216ENST00000592445 NUTM2GQ5VZR2 741 aa28.81■■■□□ 2.2
PRKCSH-216ENST00000592445 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
PRKCSH-216ENST00000592445 ATP7BP35670 1465 aa28.78■■■□□ 2.2
PRKCSH-216ENST00000592445 ITSN1Q15811 1721 aa28.78■■■□□ 2.2
PRKCSH-216ENST00000592445 PDE3BQ13370 1112 aa28.78■■■□□ 2.2
PRKCSH-216ENST00000592445 PARD3Q8TEW0 1356 aa28.77■■■□□ 2.2
PRKCSH-216ENST00000592445 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
PRKCSH-216ENST00000592445 PHRF1Q9P1Y6 1649 aaKnown RBP28.76■■■□□ 2.19
PRKCSH-216ENST00000592445 CDK19Q9BWU1 502 aa28.75■■■□□ 2.19
PRKCSH-216ENST00000592445 BARGINQ6ZT62 677 aa28.74■■■□□ 2.19
PRKCSH-216ENST00000592445 SSH2Q76I76 1423 aa28.73■■■□□ 2.19
PRKCSH-216ENST00000592445 ARHGEF28Q8N1W1 1705 aaKnown RBP28.72■■■□□ 2.19
PRKCSH-216ENST00000592445 ACEP12821 1306 aa28.71■■■□□ 2.19
PRKCSH-216ENST00000592445 NBPF8Q3BBV2 869 aa28.71■■■□□ 2.19
PRKCSH-216ENST00000592445 NBPF14Q5TI25 921 aa28.71■■■□□ 2.19
PRKCSH-216ENST00000592445 LARP1Q6PKG0 1096 aaKnown RBP28.7■■■□□ 2.18
PRKCSH-216ENST00000592445 ABTB2Q8N961 1025 aa28.7■■■□□ 2.18
PRKCSH-216ENST00000592445 TCP11L2Q8N4U5 519 aa28.69■■■□□ 2.18
PRKCSH-216ENST00000592445 CCDC61Q9Y6R9 512 aa28.69■■■□□ 2.18
PRKCSH-216ENST00000592445 POLR3AO14802 1390 aaPredicted RBP28.69■■■□□ 2.18
PRKCSH-216ENST00000592445 CAMTA1Q9Y6Y1 1673 aa28.65■■■□□ 2.18
PRKCSH-216ENST00000592445 PLEKHG3A1L390 1219 aa28.65■■■□□ 2.18
PRKCSH-216ENST00000592445 RREB1Q92766 1687 aa28.64■■■□□ 2.17
PRKCSH-216ENST00000592445 CPDO75976 1380 aa28.63■■■□□ 2.17
PRKCSH-216ENST00000592445 NRKQ7Z2Y5 1582 aa28.63■■■□□ 2.17
PRKCSH-216ENST00000592445 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
PRKCSH-216ENST00000592445 PPP1R1BQ9UD71 204 aaPredicted RBP28.62■■■□□ 2.17
PRKCSH-216ENST00000592445 TOPAZ1Q8N9V7 1692 aa28.61■■■□□ 2.17
PRKCSH-216ENST00000592445 NUP188Q5SRE5 1749 aa28.61■■■□□ 2.17
PRKCSH-216ENST00000592445 YY1P25490 414 aa28.61■■■□□ 2.17
PRKCSH-216ENST00000592445 NLRP13Q86W25 1043 aa28.6■■■□□ 2.17
PRKCSH-216ENST00000592445 USP19O94966 1318 aa28.6■■■□□ 2.17
PRKCSH-216ENST00000592445 SPON1Q9HCB6 807 aa28.59■■■□□ 2.17
PRKCSH-216ENST00000592445 LMO7Q8WWI1 1683 aa28.58■■■□□ 2.17
PRKCSH-216ENST00000592445 GCP02774 474 aa28.58■■■□□ 2.17
PRKCSH-216ENST00000592445 ZBTB7CA1YPR0 619 aa28.56■■■□□ 2.16
PRKCSH-216ENST00000592445 C11orf95C9JLR9 678 aaPredicted RBP28.56■■■□□ 2.16
PRKCSH-216ENST00000592445 SRPK2P78362 688 aaKnown RBP28.56■■■□□ 2.16
PRKCSH-216ENST00000592445 DCAF8L1A6NGE4 600 aa28.55■■■□□ 2.16
PRKCSH-216ENST00000592445 COL5A2P05997 1499 aaPredicted RBP28.54■■■□□ 2.16
PRKCSH-216ENST00000592445 KCNQ2O43526 872 aa28.54■■■□□ 2.16
PRKCSH-216ENST00000592445 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
PRKCSH-216ENST00000592445 PARP4Q9UKK3 1724 aaKnown RBP28.52■■■□□ 2.16
PRKCSH-216ENST00000592445 CRB1P82279 1406 aa28.52■■■□□ 2.16
PRKCSH-216ENST00000592445 OVOS2A0A0G2JMS6 1433 aa28.51■■■□□ 2.15
PRKCSH-216ENST00000592445 OVOS2A0A0J9YW53 1432 aa28.51■■■□□ 2.15
PRKCSH-216ENST00000592445 OVOS2Q6IE36 1432 aa28.51■■■□□ 2.15
PRKCSH-216ENST00000592445 CABP2Q9NPB3 220 aa28.5■■■□□ 2.15
PRKCSH-216ENST00000592445 NBPF1Q3BBV0 1214 aa28.49■■■□□ 2.15
PRKCSH-216ENST00000592445 NLRP6P59044 892 aa28.48■■■□□ 2.15
PRKCSH-216ENST00000592445 DDB1Q16531 1140 aa28.48■■■□□ 2.15
PRKCSH-216ENST00000592445 NINLQ9Y2I6 1382 aa28.48■■■□□ 2.15
PRKCSH-216ENST00000592445 KIAA1210Q9ULL0 1709 aa28.47■■■□□ 2.15
PRKCSH-216ENST00000592445 BRD4O60885 1362 aaPredicted RBP28.47■■■□□ 2.15
PRKCSH-216ENST00000592445 CENPJQ9HC77 1338 aaPredicted RBP28.46■■■□□ 2.15
PRKCSH-216ENST00000592445 PLSCR1O15162 318 aa28.46■■■□□ 2.15
PRKCSH-216ENST00000592445 TOM1L2Q6ZVM7 507 aa28.46■■■□□ 2.15
PRKCSH-216ENST00000592445 AATKQ6ZMQ8 1374 aa28.44■■■□□ 2.14
PRKCSH-216ENST00000592445 CABP1Q9NZU7 370 aa28.43■■■□□ 2.14
PRKCSH-216ENST00000592445 BCL11BQ9C0K0 894 aaPredicted RBP28.42■■■□□ 2.14
PRKCSH-216ENST00000592445 PEAK1Q9H792 1746 aa28.42■■■□□ 2.14
PRKCSH-216ENST00000592445 USP6P35125 1406 aa28.41■■■□□ 2.14
PRKCSH-216ENST00000592445 ANO8Q9HCE9 1232 aaPredicted RBP28.4■■■□□ 2.14
PRKCSH-216ENST00000592445 LRRC37A3O60309 1634 aa28.4■■■□□ 2.14
PRKCSH-216ENST00000592445 RGPD3A6NKT7 1758 aaPredicted RBP28.39■■■□□ 2.13
PRKCSH-216ENST00000592445 RGPD4Q7Z3J3 1758 aa28.39■■■□□ 2.13
PRKCSH-216ENST00000592445 PTF1AQ7RTS3 328 aa28.38■■■□□ 2.13
PRKCSH-216ENST00000592445 SLIT3O75094 1523 aa28.38■■■□□ 2.13
PRKCSH-216ENST00000592445 CDCA7Q9BWT1 371 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms