RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
CCDC43-205ENST00000592333 PAK3O75914 559 aaPredicted RBP27.26■■□□□ 1.95
CCDC43-205ENST00000592333 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
CCDC43-205ENST00000592333 CCDC9Q9Y3X0 531 aaKnown RBP27.25■■□□□ 1.95
CCDC43-205ENST00000592333 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
CCDC43-205ENST00000592333 NBPF1Q3BBV0 1214 aa27.24■■□□□ 1.95
CCDC43-205ENST00000592333 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
CCDC43-205ENST00000592333 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
CCDC43-205ENST00000592333 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
CCDC43-205ENST00000592333 CENPJQ9HC77 1338 aaPredicted RBP27.21■■□□□ 1.95
CCDC43-205ENST00000592333 BRWD3Q6RI45 1802 aa27.21■■□□□ 1.95
CCDC43-205ENST00000592333 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
CCDC43-205ENST00000592333 KRT27Q7Z3Y8 459 aa27.21■■□□□ 1.95
CCDC43-205ENST00000592333 ZRANB1Q9UGI0 708 aa27.21■■□□□ 1.95
CCDC43-205ENST00000592333 ACEP12821 1306 aa27.2■■□□□ 1.95
CCDC43-205ENST00000592333 BRD4O60885 1362 aaPredicted RBP27.2■■□□□ 1.94
CCDC43-205ENST00000592333 PRDM11Q9NQV5 511 aa27.19■■□□□ 1.94
CCDC43-205ENST00000592333 SF3B2Q13435 895 aaKnown RBP27.17■■□□□ 1.94
CCDC43-205ENST00000592333 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
CCDC43-205ENST00000592333 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
CCDC43-205ENST00000592333 L3MBTL2Q969R5 705 aa27.16■■□□□ 1.94
CCDC43-205ENST00000592333 SRPK2P78362 688 aaKnown RBP27.14■■□□□ 1.94
CCDC43-205ENST00000592333 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
CCDC43-205ENST00000592333 FAM98CQ17RN3 349 aaKnown RBP27.13■■□□□ 1.93
CCDC43-205ENST00000592333 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
CCDC43-205ENST00000592333 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
CCDC43-205ENST00000592333 ABTB2Q8N961 1025 aa27.11■■□□□ 1.93
CCDC43-205ENST00000592333 CPDO75976 1380 aa27.09■■□□□ 1.93
CCDC43-205ENST00000592333 A0A0G2JS52 829 aa27.09■■□□□ 1.93
CCDC43-205ENST00000592333 MYT1Q01538 1121 aa27.09■■□□□ 1.93
CCDC43-205ENST00000592333 NLRP13Q86W25 1043 aa27.09■■□□□ 1.93
CCDC43-205ENST00000592333 USP19O94966 1318 aa27.09■■□□□ 1.93
CCDC43-205ENST00000592333 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CCDC43-205ENST00000592333 SPATA31A1Q5TZJ5 1347 aa27.08■■□□□ 1.93
CCDC43-205ENST00000592333 CABP2Q9NPB3 220 aa27.07■■□□□ 1.92
CCDC43-205ENST00000592333 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
CCDC43-205ENST00000592333 THSD7AQ9UPZ6 1657 aa27.06■■□□□ 1.92
CCDC43-205ENST00000592333 ZC3H6P61129 1189 aaKnown RBP27.06■■□□□ 1.92
CCDC43-205ENST00000592333 EVC2Q86UK5 1308 aa27.06■■□□□ 1.92
CCDC43-205ENST00000592333 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
CCDC43-205ENST00000592333 NUTM2GQ5VZR2 741 aa27.04■■□□□ 1.92
CCDC43-205ENST00000592333 NRKQ7Z2Y5 1582 aa27.04■■□□□ 1.92
CCDC43-205ENST00000592333 BAG6P46379 1132 aa27.03■■□□□ 1.92
CCDC43-205ENST00000592333 CHRNA2Q15822 529 aa27.03■■□□□ 1.92
CCDC43-205ENST00000592333 ROCK2O75116 1388 aaKnown RBP27.02■■□□□ 1.92
CCDC43-205ENST00000592333 BARGINQ6ZT62 677 aa27.02■■□□□ 1.92
CCDC43-205ENST00000592333 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
CCDC43-205ENST00000592333 CABP1Q9NZU7 370 aa27.02■■□□□ 1.92
CCDC43-205ENST00000592333 SRCAPQ6ZRS2 3230 aa27.02■■□□□ 1.92
CCDC43-205ENST00000592333 USP6P35125 1406 aa27.01■■□□□ 1.91
CCDC43-205ENST00000592333 GCP02774 474 aa27.01■■□□□ 1.91
CCDC43-205ENST00000592333 EVA1CP58658 441 aa27.01■■□□□ 1.91
CCDC43-205ENST00000592333 ZNF692Q9BU19 519 aaPredicted RBP27■■□□□ 1.91
CCDC43-205ENST00000592333 SSH2Q76I76 1423 aa26.99■■□□□ 1.91
CCDC43-205ENST00000592333 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
CCDC43-205ENST00000592333 STRN4Q9NRL3 753 aa26.99■■□□□ 1.91
CCDC43-205ENST00000592333 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
CCDC43-205ENST00000592333 THRAP3Q9Y2W1 955 aaKnown RBP26.98■■□□□ 1.91
CCDC43-205ENST00000592333 RGPD1P0DJD0 1748 aa26.97■■□□□ 1.91
CCDC43-205ENST00000592333 CAMTA1Q9Y6Y1 1673 aa26.97■■□□□ 1.91
CCDC43-205ENST00000592333 DISP2A7MBM2 1401 aa26.97■■□□□ 1.91
CCDC43-205ENST00000592333 FAM196AQ6ZSG2 479 aa26.96■■□□□ 1.91
CCDC43-205ENST00000592333 SBNO2Q9Y2G9 1366 aa26.95■■□□□ 1.9
CCDC43-205ENST00000592333 NLRP6P59044 892 aa26.94■■□□□ 1.9
CCDC43-205ENST00000592333 TCP11L2Q8N4U5 519 aa26.94■■□□□ 1.9
CCDC43-205ENST00000592333 SLIT3O75094 1523 aa26.93■■□□□ 1.9
CCDC43-205ENST00000592333 AATKQ6ZMQ8 1374 aa26.92■■□□□ 1.9
CCDC43-205ENST00000592333 C11orf95C9JLR9 678 aaPredicted RBP26.91■■□□□ 1.9
CCDC43-205ENST00000592333 LARP1Q6PKG0 1096 aaKnown RBP26.91■■□□□ 1.9
CCDC43-205ENST00000592333 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
CCDC43-205ENST00000592333 TTC21AQ8NDW8 1320 aa26.9■■□□□ 1.9
CCDC43-205ENST00000592333 PDE3BQ13370 1112 aa26.89■■□□□ 1.9
CCDC43-205ENST00000592333 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
CCDC43-205ENST00000592333 USP35Q9P2H5 1018 aa26.88■■□□□ 1.89
CCDC43-205ENST00000592333 PARD3Q8TEW0 1356 aa26.87■■□□□ 1.89
CCDC43-205ENST00000592333 FAM182BQ5T319 152 aa26.87■■□□□ 1.89
CCDC43-205ENST00000592333 CRB1P82279 1406 aa26.87■■□□□ 1.89
CCDC43-205ENST00000592333 CPSF1Q10570 1443 aaKnown RBP26.87■■□□□ 1.89
CCDC43-205ENST00000592333 TTC21BQ7Z4L5 1316 aa26.86■■□□□ 1.89
CCDC43-205ENST00000592333 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
CCDC43-205ENST00000592333 AKAP12Q02952 1782 aa26.85■■□□□ 1.89
CCDC43-205ENST00000592333 EN1Q05925 392 aaPredicted RBP26.85■■□□□ 1.89
CCDC43-205ENST00000592333 TNS1Q9HBL0 1735 aaKnown RBP26.85■■□□□ 1.89
CCDC43-205ENST00000592333 CARD11Q9BXL7 1154 aa26.83■■□□□ 1.89
CCDC43-205ENST00000592333 PUS7Q96PZ0 661 aaKnown RBP26.82■■□□□ 1.88
CCDC43-205ENST00000592333 TONSLQ96HA7 1378 aa26.82■■□□□ 1.88
CCDC43-205ENST00000592333 PARP4Q9UKK3 1724 aaKnown RBP26.82■■□□□ 1.88
CCDC43-205ENST00000592333 TRIM37O94972 964 aa26.81■■□□□ 1.88
CCDC43-205ENST00000592333 LRP5O75197 1615 aa26.8■■□□□ 1.88
CCDC43-205ENST00000592333 ARHGEF25Q86VW2 580 aa26.8■■□□□ 1.88
CCDC43-205ENST00000592333 CAMKK2Q96RR4 588 aa26.8■■□□□ 1.88
CCDC43-205ENST00000592333 KTN1Q86UP2 1357 aaKnown RBP26.8■■□□□ 1.88
CCDC43-205ENST00000592333 COL18A1P39060 1754 aa26.79■■□□□ 1.88
CCDC43-205ENST00000592333 CDCA7Q9BWT1 371 aaPredicted RBP26.79■■□□□ 1.88
CCDC43-205ENST00000592333 SLC24A1O60721 1099 aa26.78■■□□□ 1.88
CCDC43-205ENST00000592333 WDR17Q8IZU2 1322 aa26.78■■□□□ 1.88
CCDC43-205ENST00000592333 ABCC6O95255 1503 aa26.77■■□□□ 1.88
CCDC43-205ENST00000592333 APBA3O96018 575 aa26.76■■□□□ 1.87
CCDC43-205ENST00000592333 TOM1L2Q6ZVM7 507 aa26.76■■□□□ 1.87
CCDC43-205ENST00000592333 USP31Q70CQ4 1352 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms