RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-214ENST00000592186 LRRC59Q96AG4 307 aaKnown RBP14.6□□□□□ -0.07
SMAD4-214ENST00000592186 TTC21BQ7Z4L5 1316 aa14.59□□□□□ -0.07
SMAD4-214ENST00000592186 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
SMAD4-214ENST00000592186 MYOM1P52179 1685 aa14.57□□□□□ -0.08
SMAD4-214ENST00000592186 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
SMAD4-214ENST00000592186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMAD4-214ENST00000592186 ABTB2Q8N961 1025 aa14.57□□□□□ -0.08
SMAD4-214ENST00000592186 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
SMAD4-214ENST00000592186 NPC1L1Q9UHC9 1359 aa14.56□□□□□ -0.08
SMAD4-214ENST00000592186 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
SMAD4-214ENST00000592186 FYB1O15117 783 aa14.56□□□□□ -0.08
SMAD4-214ENST00000592186 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
SMAD4-214ENST00000592186 SPATA31A3Q5VYP0 1347 aa14.56□□□□□ -0.08
SMAD4-214ENST00000592186 NSD2O96028 1365 aa14.55□□□□□ -0.08
SMAD4-214ENST00000592186 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SMAD4-214ENST00000592186 NLRP13Q86W25 1043 aa14.55□□□□□ -0.08
SMAD4-214ENST00000592186 FBXO41Q8TF61 875 aa14.55□□□□□ -0.08
SMAD4-214ENST00000592186 PXDNQ92626 1479 aa14.55□□□□□ -0.08
SMAD4-214ENST00000592186 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
SMAD4-214ENST00000592186 AHDC1Q5TGY3 1603 aaPredicted RBP14.54□□□□□ -0.08
SMAD4-214ENST00000592186 NLRP6P59044 892 aa14.54□□□□□ -0.08
SMAD4-214ENST00000592186 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
SMAD4-214ENST00000592186 COG3Q96JB2 828 aa14.54□□□□□ -0.08
SMAD4-214ENST00000592186 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
SMAD4-214ENST00000592186 AKAP12Q02952 1782 aa14.53□□□□□ -0.08
SMAD4-214ENST00000592186 USP31Q70CQ4 1352 aa14.53□□□□□ -0.08
SMAD4-214ENST00000592186 NME9Q86XW9 330 aa14.52□□□□□ -0.08
SMAD4-214ENST00000592186 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
SMAD4-214ENST00000592186 MON2Q7Z3U7 1717 aa14.52□□□□□ -0.09
SMAD4-214ENST00000592186 TNS3Q68CZ2 1445 aa14.52□□□□□ -0.09
SMAD4-214ENST00000592186 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
SMAD4-214ENST00000592186 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
SMAD4-214ENST00000592186 GGNBP2Q9H3C7 697 aa14.51□□□□□ -0.09
SMAD4-214ENST00000592186 RALBP1Q15311 655 aa14.5□□□□□ -0.09
SMAD4-214ENST00000592186 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
SMAD4-214ENST00000592186 KCNH5Q8NCM2 988 aa14.5□□□□□ -0.09
SMAD4-214ENST00000592186 ANP32CO43423 234 aa14.49□□□□□ -0.09
SMAD4-214ENST00000592186 HSPA1LP34931 641 aa14.49□□□□□ -0.09
SMAD4-214ENST00000592186 TRPM3Q9HCF6 1732 aaPredicted RBP14.47□□□□□ -0.09
SMAD4-214ENST00000592186 NRKQ7Z2Y5 1582 aa14.47□□□□□ -0.09
SMAD4-214ENST00000592186 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
SMAD4-214ENST00000592186 NUTM2GQ5VZR2 741 aa14.47□□□□□ -0.09
SMAD4-214ENST00000592186 PHLPP1O60346 1717 aa14.47□□□□□ -0.09
SMAD4-214ENST00000592186 JCADQ9P266 1359 aa14.46□□□□□ -0.09
SMAD4-214ENST00000592186 GCP02774 474 aa14.46□□□□□ -0.09
SMAD4-214ENST00000592186 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
SMAD4-214ENST00000592186 USP19O94966 1318 aa14.45□□□□□ -0.1
SMAD4-214ENST00000592186 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-214ENST00000592186 PRKRIP1Q9H875 184 aaPredicted RBP14.45□□□□□ -0.1
SMAD4-214ENST00000592186 OVOS2A0A0J9YW53 1432 aa14.45□□□□□ -0.1
SMAD4-214ENST00000592186 OVOS2Q6IE36 1432 aa14.45□□□□□ -0.1
SMAD4-214ENST00000592186 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
SMAD4-214ENST00000592186 COL16A1Q07092 1604 aaPredicted RBP14.44□□□□□ -0.1
SMAD4-214ENST00000592186 SPATA31A6Q5VVP1 1343 aa14.44□□□□□ -0.1
SMAD4-214ENST00000592186 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
SMAD4-214ENST00000592186 ALS2Q96Q42 1657 aa14.43□□□□□ -0.1
SMAD4-214ENST00000592186 AATKQ6ZMQ8 1374 aa14.43□□□□□ -0.1
SMAD4-214ENST00000592186 PARD3Q8TEW0 1356 aa14.43□□□□□ -0.1
SMAD4-214ENST00000592186 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
SMAD4-214ENST00000592186 TNNT2P45379 298 aaPredicted RBP14.41□□□□□ -0.1
SMAD4-214ENST00000592186 CABLES1Q8TDN4 633 aa14.41□□□□□ -0.1
SMAD4-214ENST00000592186 KIF20BQ96Q89 1820 aa14.4□□□□□ -0.1
SMAD4-214ENST00000592186 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
SMAD4-214ENST00000592186 SOX12O15370 315 aa14.4□□□□□ -0.1
SMAD4-214ENST00000592186 PLEKHG5O94827 1062 aa14.4□□□□□ -0.1
SMAD4-214ENST00000592186 PPP2R1AP30153 589 aa14.4□□□□□ -0.1
SMAD4-214ENST00000592186 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
SMAD4-214ENST00000592186 ARHGEF25Q86VW2 580 aa14.4□□□□□ -0.1
SMAD4-214ENST00000592186 USP54Q70EL1 1684 aa14.39□□□□□ -0.11
SMAD4-214ENST00000592186 KIF24Q5T7B8 1368 aa14.39□□□□□ -0.11
SMAD4-214ENST00000592186 POLKQ9UBT6 870 aa14.39□□□□□ -0.11
SMAD4-214ENST00000592186 SLIT3O75094 1523 aa14.38□□□□□ -0.11
SMAD4-214ENST00000592186 CPDO75976 1380 aa14.38□□□□□ -0.11
SMAD4-214ENST00000592186 COL22A1Q8NFW1 1626 aaPredicted RBP14.38□□□□□ -0.11
SMAD4-214ENST00000592186 AMPHP49418 695 aa14.38□□□□□ -0.11
SMAD4-214ENST00000592186 MTHFSP49914 203 aa14.38□□□□□ -0.11
SMAD4-214ENST00000592186 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
SMAD4-214ENST00000592186 CFAP53Q96M91 514 aa14.38□□□□□ -0.11
SMAD4-214ENST00000592186 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
SMAD4-214ENST00000592186 NUTM2BA6NNL0 878 aaPredicted RBP14.37□□□□□ -0.11
SMAD4-214ENST00000592186 NUTM2EB1AL46 878 aaPredicted RBP14.37□□□□□ -0.11
SMAD4-214ENST00000592186 NUTM2AQ8IVF1 878 aaPredicted RBP14.37□□□□□ -0.11
SMAD4-214ENST00000592186 IP6K1Q92551 441 aa14.37□□□□□ -0.11
SMAD4-214ENST00000592186 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
SMAD4-214ENST00000592186 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
SMAD4-214ENST00000592186 PPM1GO15355 546 aaPredicted RBP14.36□□□□□ -0.11
SMAD4-214ENST00000592186 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
SMAD4-214ENST00000592186 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
SMAD4-214ENST00000592186 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
SMAD4-214ENST00000592186 FBLN1P23142 703 aa14.35□□□□□ -0.11
SMAD4-214ENST00000592186 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 FLT4P35916 1363 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 EMILIN1Q9Y6C2 1016 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 NFAT5O94916 1531 aa14.34□□□□□ -0.11
SMAD4-214ENST00000592186 INSRP06213 1382 aa14.33□□□□□ -0.12
SMAD4-214ENST00000592186 ZBTB7CA1YPR0 619 aa14.33□□□□□ -0.12
SMAD4-214ENST00000592186 CCER2I3L3R5 266 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms