RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TCERG1O14776 1098 aaKnown RBP25.64■■□□□ 1.7
MBD3-209ENST00000592012 DIAPH1O60610 1272 aaKnown RBP25.62■■□□□ 1.69
MBD3-209ENST00000592012 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
MBD3-209ENST00000592012 KDM2BQ8NHM5 1336 aa25.61■■□□□ 1.69
MBD3-209ENST00000592012 PLEKHG1Q9ULL1 1385 aa25.61■■□□□ 1.69
MBD3-209ENST00000592012 EDC4Q6P2E9 1401 aaKnown RBP25.61■■□□□ 1.69
MBD3-209ENST00000592012 ROBO2Q9HCK4 1378 aa25.61■■□□□ 1.69
MBD3-209ENST00000592012 POLKQ9UBT6 870 aa25.6■■□□□ 1.69
MBD3-209ENST00000592012 NCKAP5LQ9HCH0 1330 aa25.59■■□□□ 1.69
MBD3-209ENST00000592012 FBLN1P23142 703 aa25.59■■□□□ 1.69
MBD3-209ENST00000592012 TMPOP42166 694 aaKnown RBP25.59■■□□□ 1.69
MBD3-209ENST00000592012 PDE3AQ14432 1141 aa25.58■■□□□ 1.69
MBD3-209ENST00000592012 RARSP54136 660 aaKnown RBP25.58■■□□□ 1.68
MBD3-209ENST00000592012 MYH16Q9H6N6 1097 aa25.57■■□□□ 1.68
MBD3-209ENST00000592012 C3P01024 1663 aa25.56■■□□□ 1.68
MBD3-209ENST00000592012 ANP32EQ9BTT0 268 aa25.56■■□□□ 1.68
MBD3-209ENST00000592012 MAP2P11137 1827 aaKnown RBP25.56■■□□□ 1.68
MBD3-209ENST00000592012 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
MBD3-209ENST00000592012 MS4A1P11836 297 aa25.56■■□□□ 1.68
MBD3-209ENST00000592012 CENPQQ7L2Z9 268 aaPredicted RBP25.55■■□□□ 1.68
MBD3-209ENST00000592012 NME9Q86XW9 330 aa25.55■■□□□ 1.68
MBD3-209ENST00000592012 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
MBD3-209ENST00000592012 PRR36Q9H6K5 1346 aa25.55■■□□□ 1.68
MBD3-209ENST00000592012 MAPK8IP3Q9UPT6 1336 aa25.55■■□□□ 1.68
MBD3-209ENST00000592012 PNNQ9H307 717 aaKnown RBP25.54■■□□□ 1.68
MBD3-209ENST00000592012 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
MBD3-209ENST00000592012 PPM1GO15355 546 aaPredicted RBP25.53■■□□□ 1.68
MBD3-209ENST00000592012 FCHSD2O94868 740 aa25.53■■□□□ 1.68
MBD3-209ENST00000592012 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
MBD3-209ENST00000592012 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
MBD3-209ENST00000592012 SLC26A8Q96RN1 970 aa25.52■■□□□ 1.68
MBD3-209ENST00000592012 ZRANB1Q9UGI0 708 aa25.52■■□□□ 1.68
MBD3-209ENST00000592012 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.67
MBD3-209ENST00000592012 SLIT1O75093 1534 aa25.51■■□□□ 1.67
MBD3-209ENST00000592012 SKAP1Q86WV1 359 aa25.51■■□□□ 1.67
MBD3-209ENST00000592012 ARHGAP23Q9P227 1491 aa25.5■■□□□ 1.67
MBD3-209ENST00000592012 AKAP12Q02952 1782 aa25.5■■□□□ 1.67
MBD3-209ENST00000592012 AATKQ6ZMQ8 1374 aa25.5■■□□□ 1.67
MBD3-209ENST00000592012 CANXP27824 592 aaKnown RBP25.49■■□□□ 1.67
MBD3-209ENST00000592012 FER1L4A9Z1Z3 1794 aa25.49■■□□□ 1.67
MBD3-209ENST00000592012 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
MBD3-209ENST00000592012 PDE4AP27815 886 aa25.49■■□□□ 1.67
MBD3-209ENST00000592012 RIPK4P57078 832 aa25.49■■□□□ 1.67
MBD3-209ENST00000592012 EMILIN1Q9Y6C2 1016 aa25.49■■□□□ 1.67
MBD3-209ENST00000592012 PANK1Q8TE04 598 aa25.48■■□□□ 1.67
MBD3-209ENST00000592012 FRAT1Q92837 279 aaPredicted RBP25.48■■□□□ 1.67
MBD3-209ENST00000592012 PLPPR3Q6T4P5 718 aa25.48■■□□□ 1.67
MBD3-209ENST00000592012 COG3Q96JB2 828 aa25.48■■□□□ 1.67
MBD3-209ENST00000592012 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
MBD3-209ENST00000592012 BACH2Q9BYV9 841 aa25.47■■□□□ 1.67
MBD3-209ENST00000592012 IL16Q14005 1332 aa25.47■■□□□ 1.67
MBD3-209ENST00000592012 ITSN1Q15811 1721 aa25.47■■□□□ 1.67
MBD3-209ENST00000592012 TSR2Q969E8 191 aaKnown RBP25.46■■□□□ 1.67
MBD3-209ENST00000592012 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
MBD3-209ENST00000592012 CT47B1P0C2W7 299 aaPredicted RBP25.46■■□□□ 1.67
MBD3-209ENST00000592012 COG6Q9Y2V7 657 aa25.46■■□□□ 1.67
MBD3-209ENST00000592012 THEMISQ8N1K5 641 aaPredicted RBP25.45■■□□□ 1.66
MBD3-209ENST00000592012 LRRC7Q96NW7 1537 aa25.45■■□□□ 1.66
MBD3-209ENST00000592012 IL13P35225 146 aa25.45■■□□□ 1.66
MBD3-209ENST00000592012 PRKAR2BP31323 418 aa25.44■■□□□ 1.66
MBD3-209ENST00000592012 BCL2L13Q9BXK5 485 aa25.44■■□□□ 1.66
MBD3-209ENST00000592012 AMOTL2Q9Y2J4 779 aa25.44■■□□□ 1.66
MBD3-209ENST00000592012 CDK12Q9NYV4 1490 aaPredicted RBP25.44■■□□□ 1.66
MBD3-209ENST00000592012 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
MBD3-209ENST00000592012 CLUAP1Q96AJ1 413 aa25.42■■□□□ 1.66
MBD3-209ENST00000592012 ACEP12821 1306 aa25.42■■□□□ 1.66
MBD3-209ENST00000592012 EXOSC9Q06265 439 aaKnown RBP25.41■■□□□ 1.66
MBD3-209ENST00000592012 TOPAZ1Q8N9V7 1692 aa25.41■■□□□ 1.66
MBD3-209ENST00000592012 RLBP1P12271 317 aa25.4■■□□□ 1.66
MBD3-209ENST00000592012 RRS1Q15050 365 aaKnown RBP25.4■■□□□ 1.66
MBD3-209ENST00000592012 NUTM2FA1L443 756 aa25.4■■□□□ 1.66
MBD3-209ENST00000592012 HMOX1P09601 288 aa25.4■■□□□ 1.66
MBD3-209ENST00000592012 ANP32AP39687 249 aaKnown RBP25.4■■□□□ 1.66
MBD3-209ENST00000592012 TTC21BQ7Z4L5 1316 aa25.4■■□□□ 1.66
MBD3-209ENST00000592012 PHACTR3Q96KR7 559 aa25.39■■□□□ 1.66
MBD3-209ENST00000592012 TNNQ9UQP3 1299 aa25.39■■□□□ 1.66
MBD3-209ENST00000592012 IGHDP01880 384 aa25.38■■□□□ 1.65
MBD3-209ENST00000592012 NEFMP07197 916 aa25.38■■□□□ 1.65
MBD3-209ENST00000592012 MYT1Q01538 1121 aa25.38■■□□□ 1.65
MBD3-209ENST00000592012 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
MBD3-209ENST00000592012 AAMPQ13685 434 aa25.37■■□□□ 1.65
MBD3-209ENST00000592012 NRKQ7Z2Y5 1582 aa25.36■■□□□ 1.65
MBD3-209ENST00000592012 NFE2L2Q16236 605 aa25.36■■□□□ 1.65
MBD3-209ENST00000592012 IPO9Q96P70 1041 aaKnown RBP25.35■■□□□ 1.65
MBD3-209ENST00000592012 USP6P35125 1406 aa25.35■■□□□ 1.65
MBD3-209ENST00000592012 DIP2AQ14689 1571 aa25.34■■□□□ 1.65
MBD3-209ENST00000592012 ZKSCAN2Q63HK3 967 aa25.33■■□□□ 1.65
MBD3-209ENST00000592012 SSH1Q8WYL5 1049 aa25.33■■□□□ 1.65
MBD3-209ENST00000592012 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
MBD3-209ENST00000592012 SMC4Q9NTJ3 1288 aa25.32■■□□□ 1.64
MBD3-209ENST00000592012 OVOS2A0A0J9YW53 1432 aa25.32■■□□□ 1.64
MBD3-209ENST00000592012 OVOS2Q6IE36 1432 aa25.32■■□□□ 1.64
MBD3-209ENST00000592012 SSH2Q76I76 1423 aa25.31■■□□□ 1.64
MBD3-209ENST00000592012 NOP58Q9Y2X3 529 aaKnown RBP25.29■■□□□ 1.64
MBD3-209ENST00000592012 MVPQ14764 893 aaKnown RBP25.29■■□□□ 1.64
MBD3-209ENST00000592012 DZIP1LQ8IYY4 767 aaKnown RBP25.29■■□□□ 1.64
MBD3-209ENST00000592012 PCDHB15Q9Y5E8 787 aa25.29■■□□□ 1.64
MBD3-209ENST00000592012 RGS3P49796 1198 aa25.27■■□□□ 1.64
MBD3-209ENST00000592012 PMFBP1Q8TBY8 1022 aa25.27■■□□□ 1.64
MBD3-209ENST00000592012 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms