RNA–Protein interactions for RNA: ENST00000591594.5

TMC6-219, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 614 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-219ENST00000591594 PLEKHG3A1L390 1219 aa23.88■■□□□ 1.41
TMC6-219ENST00000591594 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
TMC6-219ENST00000591594 BCL9LQ86UU0 1499 aa23.86■■□□□ 1.41
TMC6-219ENST00000591594 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
TMC6-219ENST00000591594 ATRNO75882 1429 aa23.85■■□□□ 1.41
TMC6-219ENST00000591594 RGS12O14924 1447 aa23.84■■□□□ 1.41
TMC6-219ENST00000591594 SLIT2O94813 1529 aa23.84■■□□□ 1.41
TMC6-219ENST00000591594 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
TMC6-219ENST00000591594 CABP1Q9NZU7 370 aa23.84■■□□□ 1.41
TMC6-219ENST00000591594 NUTM2GQ5VZR2 741 aa23.83■■□□□ 1.41
TMC6-219ENST00000591594 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.41
TMC6-219ENST00000591594 UNC5CLQ8IV45 518 aa23.82■■□□□ 1.4
TMC6-219ENST00000591594 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
TMC6-219ENST00000591594 SBNO2Q9Y2G9 1366 aa23.81■■□□□ 1.4
TMC6-219ENST00000591594 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
TMC6-219ENST00000591594 NWD2Q9ULI1 1742 aa23.8■■□□□ 1.4
TMC6-219ENST00000591594 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
TMC6-219ENST00000591594 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
TMC6-219ENST00000591594 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
TMC6-219ENST00000591594 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
TMC6-219ENST00000591594 USP6P35125 1406 aa23.77■■□□□ 1.4
TMC6-219ENST00000591594 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
TMC6-219ENST00000591594 GJD4Q96KN9 370 aaPredicted RBP23.76■■□□□ 1.39
TMC6-219ENST00000591594 CCDC9Q9Y3X0 531 aaKnown RBP23.76■■□□□ 1.39
TMC6-219ENST00000591594 PRDM11Q9NQV5 511 aa23.75■■□□□ 1.39
TMC6-219ENST00000591594 BRD4O60885 1362 aaPredicted RBP23.75■■□□□ 1.39
TMC6-219ENST00000591594 BTG4Q9NY30 223 aa23.74■■□□□ 1.39
TMC6-219ENST00000591594 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
TMC6-219ENST00000591594 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
TMC6-219ENST00000591594 TIMELESSQ9UNS1 1208 aa23.73■■□□□ 1.39
TMC6-219ENST00000591594 GLI3P10071 1580 aa23.73■■□□□ 1.39
TMC6-219ENST00000591594 NRKQ7Z2Y5 1582 aa23.73■■□□□ 1.39
TMC6-219ENST00000591594 ST20-MTHFSA0A0A6YYL1 179 aa23.72■■□□□ 1.39
TMC6-219ENST00000591594 ZC3H6P61129 1189 aaKnown RBP23.72■■□□□ 1.39
TMC6-219ENST00000591594 NLRP13Q86W25 1043 aa23.72■■□□□ 1.39
TMC6-219ENST00000591594 KIAA0232Q92628 1395 aa23.72■■□□□ 1.39
TMC6-219ENST00000591594 VPS72Q15906 364 aa23.71■■□□□ 1.39
TMC6-219ENST00000591594 TMC1Q8TDI8 760 aa23.7■■□□□ 1.38
TMC6-219ENST00000591594 USP47Q96K76 1375 aa23.69■■□□□ 1.38
TMC6-219ENST00000591594 CHRNA2Q15822 529 aa23.69■■□□□ 1.38
TMC6-219ENST00000591594 ZNF692Q9BU19 519 aaPredicted RBP23.69■■□□□ 1.38
TMC6-219ENST00000591594 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
TMC6-219ENST00000591594 USP19O94966 1318 aa23.68■■□□□ 1.38
TMC6-219ENST00000591594 PIK3C2AO00443 1686 aa23.68■■□□□ 1.38
TMC6-219ENST00000591594 NLRP6P59044 892 aa23.68■■□□□ 1.38
TMC6-219ENST00000591594 UPF1Q92900 1129 aaKnown RBP eCLIP23.67■■□□□ 1.383e-6■■■□□ 14.8
TMC6-219ENST00000591594 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
TMC6-219ENST00000591594 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
TMC6-219ENST00000591594 TESK2Q96S53 571 aa23.66■■□□□ 1.38
TMC6-219ENST00000591594 MON2Q7Z3U7 1717 aa23.66■■□□□ 1.38
TMC6-219ENST00000591594 TTC21BQ7Z4L5 1316 aa23.65■■□□□ 1.38
TMC6-219ENST00000591594 A0A0G2JS52 829 aa23.64■■□□□ 1.37
TMC6-219ENST00000591594 ZBTB7CA1YPR0 619 aa23.64■■□□□ 1.37
TMC6-219ENST00000591594 GCP02774 474 aa23.64■■□□□ 1.37
TMC6-219ENST00000591594 MYT1Q01538 1121 aa23.64■■□□□ 1.37
TMC6-219ENST00000591594 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
TMC6-219ENST00000591594 HDGFL2Q7Z4V5 671 aaPredicted RBP23.63■■□□□ 1.37
TMC6-219ENST00000591594 STRN4Q9NRL3 753 aa23.63■■□□□ 1.37
TMC6-219ENST00000591594 SLIT3O75094 1523 aa23.63■■□□□ 1.37
TMC6-219ENST00000591594 TTC21AQ8NDW8 1320 aa23.62■■□□□ 1.37
TMC6-219ENST00000591594 SLC12A5Q9H2X9 1139 aa23.62■■□□□ 1.37
TMC6-219ENST00000591594 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
TMC6-219ENST00000591594 CPDO75976 1380 aa23.61■■□□□ 1.37
TMC6-219ENST00000591594 TMF1P82094 1093 aa23.6■■□□□ 1.37
TMC6-219ENST00000591594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.6■■□□□ 1.37
TMC6-219ENST00000591594 SEPT12Q8IYM1 358 aa23.6■■□□□ 1.37
TMC6-219ENST00000591594 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
TMC6-219ENST00000591594 SOX12O15370 315 aa23.59■■□□□ 1.37
TMC6-219ENST00000591594 TERF2IPQ9NYB0 399 aa23.59■■□□□ 1.37
TMC6-219ENST00000591594 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
TMC6-219ENST00000591594 LMO7Q8WWI1 1683 aa23.58■■□□□ 1.37
TMC6-219ENST00000591594 A0A1W2PP64 1363 aa23.58■■□□□ 1.37
TMC6-219ENST00000591594 EVA1CP58658 441 aa23.58■■□□□ 1.37
TMC6-219ENST00000591594 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
TMC6-219ENST00000591594 SPATA31A5Q5VU36 1347 aa23.58■■□□□ 1.36
TMC6-219ENST00000591594 SPATA31A7Q8IWB4 1347 aa23.58■■□□□ 1.36
TMC6-219ENST00000591594 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
TMC6-219ENST00000591594 NINLQ9Y2I6 1382 aa23.56■■□□□ 1.36
TMC6-219ENST00000591594 EDC4Q6P2E9 1401 aaKnown RBP23.55■■□□□ 1.36
TMC6-219ENST00000591594 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
TMC6-219ENST00000591594 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
TMC6-219ENST00000591594 ONECUT3O60422 494 aaPredicted RBP23.53■■□□□ 1.36
TMC6-219ENST00000591594 NME9Q86XW9 330 aa23.53■■□□□ 1.36
TMC6-219ENST00000591594 SPATA31A1Q5TZJ5 1347 aa23.53■■□□□ 1.36
TMC6-219ENST00000591594 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
TMC6-219ENST00000591594 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
TMC6-219ENST00000591594 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
TMC6-219ENST00000591594 LARP1Q6PKG0 1096 aaKnown RBP23.51■■□□□ 1.35
TMC6-219ENST00000591594 KRT27Q7Z3Y8 459 aa23.51■■□□□ 1.35
TMC6-219ENST00000591594 USP54Q70EL1 1684 aa23.5■■□□□ 1.35
TMC6-219ENST00000591594 THSD7AQ9UPZ6 1657 aa23.5■■□□□ 1.35
TMC6-219ENST00000591594 AATKQ6ZMQ8 1374 aa23.5■■□□□ 1.35
TMC6-219ENST00000591594 USP31Q70CQ4 1352 aa23.49■■□□□ 1.35
TMC6-219ENST00000591594 NFAT5O94916 1531 aa23.49■■□□□ 1.35
TMC6-219ENST00000591594 ANKRD36BQ8N2N9 1353 aa23.48■■□□□ 1.35
TMC6-219ENST00000591594 COL18A1P39060 1754 aa23.47■■□□□ 1.35
TMC6-219ENST00000591594 ARHGEF25Q86VW2 580 aa23.46■■□□□ 1.35
TMC6-219ENST00000591594 CRB1P82279 1406 aa23.45■■□□□ 1.34
TMC6-219ENST00000591594 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
TMC6-219ENST00000591594 RGPD5Q99666 1765 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms