RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 SLIT1O75093 1534 aa24.53■■□□□ 1.52
GCDH-216ENST00000591470 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
GCDH-216ENST00000591470 ROBO2Q9HCK4 1378 aa24.51■■□□□ 1.51
GCDH-216ENST00000591470 BCAR3O75815 825 aa24.51■■□□□ 1.51
GCDH-216ENST00000591470 NUDT16Q96DE0 195 aaKnown RBP24.51■■□□□ 1.51
GCDH-216ENST00000591470 TCERG1O14776 1098 aaKnown RBP24.5■■□□□ 1.51
GCDH-216ENST00000591470 LTKP29376 864 aa24.5■■□□□ 1.51
GCDH-216ENST00000591470 ITSN1Q15811 1721 aa24.49■■□□□ 1.51
GCDH-216ENST00000591470 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.49■■□□□ 1.51
GCDH-216ENST00000591470 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
GCDH-216ENST00000591470 CEBPAP49715 358 aaPredicted RBP24.49■■□□□ 1.51
GCDH-216ENST00000591470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.49■■□□□ 1.51
GCDH-216ENST00000591470 CCDC61Q9Y6R9 512 aa24.49■■□□□ 1.51
GCDH-216ENST00000591470 U2SURPO15042 1029 aaKnown RBP24.48■■□□□ 1.51
GCDH-216ENST00000591470 KDM2BQ8NHM5 1336 aa24.48■■□□□ 1.51
GCDH-216ENST00000591470 TOPAZ1Q8N9V7 1692 aa24.47■■□□□ 1.51
GCDH-216ENST00000591470 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
GCDH-216ENST00000591470 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
GCDH-216ENST00000591470 MSH5O43196 834 aa24.45■■□□□ 1.5
GCDH-216ENST00000591470 PDE3AQ14432 1141 aa24.45■■□□□ 1.5
GCDH-216ENST00000591470 MYH16Q9H6N6 1097 aa24.45■■□□□ 1.5
GCDH-216ENST00000591470 AATKQ6ZMQ8 1374 aa24.44■■□□□ 1.5
GCDH-216ENST00000591470 PRR36Q9H6K5 1346 aa24.44■■□□□ 1.5
GCDH-216ENST00000591470 MS4A1P11836 297 aa24.44■■□□□ 1.5
GCDH-216ENST00000591470 TMPOP42166 694 aaKnown RBP24.44■■□□□ 1.5
GCDH-216ENST00000591470 PNNQ9H307 717 aaKnown RBP24.44■■□□□ 1.5
GCDH-216ENST00000591470 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
GCDH-216ENST00000591470 MAPK8IP3Q9UPT6 1336 aa24.43■■□□□ 1.5
GCDH-216ENST00000591470 RARSP54136 660 aaKnown RBP24.43■■□□□ 1.5
GCDH-216ENST00000591470 CENPQQ7L2Z9 268 aaPredicted RBP24.43■■□□□ 1.5
GCDH-216ENST00000591470 EID1Q9Y6B2 187 aa24.43■■□□□ 1.5
GCDH-216ENST00000591470 LRRC7Q96NW7 1537 aa24.42■■□□□ 1.5
GCDH-216ENST00000591470 CDK12Q9NYV4 1490 aaPredicted RBP24.42■■□□□ 1.5
GCDH-216ENST00000591470 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
GCDH-216ENST00000591470 NRKQ7Z2Y5 1582 aa24.41■■□□□ 1.5
GCDH-216ENST00000591470 ZNF692Q9BU19 519 aaPredicted RBP24.41■■□□□ 1.5
GCDH-216ENST00000591470 NCKAP5LQ9HCH0 1330 aa24.41■■□□□ 1.5
GCDH-216ENST00000591470 NME9Q86XW9 330 aa24.41■■□□□ 1.5
GCDH-216ENST00000591470 TRIM35Q9UPQ4 493 aa24.41■■□□□ 1.5
GCDH-216ENST00000591470 FCHSD2O94868 740 aa24.4■■□□□ 1.5
GCDH-216ENST00000591470 IL16Q14005 1332 aa24.39■■□□□ 1.5
GCDH-216ENST00000591470 CT47B1P0C2W7 299 aaPredicted RBP24.38■■□□□ 1.49
GCDH-216ENST00000591470 TBX22Q9Y458 520 aa24.38■■□□□ 1.49
GCDH-216ENST00000591470 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
GCDH-216ENST00000591470 ANP32EQ9BTT0 268 aa24.37■■□□□ 1.49
GCDH-216ENST00000591470 FBLN1P23142 703 aa24.36■■□□□ 1.49
GCDH-216ENST00000591470 RSPH6AQ9H0K4 717 aa24.36■■□□□ 1.49
GCDH-216ENST00000591470 COG3Q96JB2 828 aa24.35■■□□□ 1.49
GCDH-216ENST00000591470 PLEKHG3A1L390 1219 aa24.34■■□□□ 1.49
GCDH-216ENST00000591470 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
GCDH-216ENST00000591470 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
GCDH-216ENST00000591470 ZRANB1Q9UGI0 708 aa24.34■■□□□ 1.49
GCDH-216ENST00000591470 EMILIN1Q9Y6C2 1016 aa24.34■■□□□ 1.49
GCDH-216ENST00000591470 CANXP27824 592 aaKnown RBP24.33■■□□□ 1.49
GCDH-216ENST00000591470 RIPK4P57078 832 aa24.33■■□□□ 1.49
GCDH-216ENST00000591470 IL13P35225 146 aa24.32■■□□□ 1.48
GCDH-216ENST00000591470 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
GCDH-216ENST00000591470 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
GCDH-216ENST00000591470 PDE4AP27815 886 aa24.31■■□□□ 1.48
GCDH-216ENST00000591470 AMOTL2Q9Y2J4 779 aa24.31■■□□□ 1.48
GCDH-216ENST00000591470 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
GCDH-216ENST00000591470 PANK1Q8TE04 598 aa24.3■■□□□ 1.48
GCDH-216ENST00000591470 BACH2Q9BYV9 841 aa24.3■■□□□ 1.48
GCDH-216ENST00000591470 AAMPQ13685 434 aa24.3■■□□□ 1.48
GCDH-216ENST00000591470 USP6P35125 1406 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 FRAT1Q92837 279 aaPredicted RBP24.29■■□□□ 1.48
GCDH-216ENST00000591470 TSR2Q969E8 191 aaKnown RBP24.29■■□□□ 1.48
GCDH-216ENST00000591470 ACEP12821 1306 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 TTC21BQ7Z4L5 1316 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 OVOS2A0A0J9YW53 1432 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 OVOS2Q6IE36 1432 aa24.29■■□□□ 1.48
GCDH-216ENST00000591470 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
GCDH-216ENST00000591470 CLUAP1Q96AJ1 413 aa24.28■■□□□ 1.48
GCDH-216ENST00000591470 COG6Q9Y2V7 657 aa24.28■■□□□ 1.48
GCDH-216ENST00000591470 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
GCDH-216ENST00000591470 SSH2Q76I76 1423 aa24.27■■□□□ 1.48
GCDH-216ENST00000591470 MYT1Q01538 1121 aa24.26■■□□□ 1.47
GCDH-216ENST00000591470 EXOSC9Q06265 439 aaKnown RBP24.26■■□□□ 1.47
GCDH-216ENST00000591470 SKAP1Q86WV1 359 aa24.26■■□□□ 1.47
GCDH-216ENST00000591470 NEFMP07197 916 aa24.26■■□□□ 1.47
GCDH-216ENST00000591470 NFE2L2Q16236 605 aa24.25■■□□□ 1.47
GCDH-216ENST00000591470 PLPPR3Q6T4P5 718 aa24.25■■□□□ 1.47
GCDH-216ENST00000591470 BCL2L13Q9BXK5 485 aa24.24■■□□□ 1.47
GCDH-216ENST00000591470 ANP32AP39687 249 aaKnown RBP24.24■■□□□ 1.47
GCDH-216ENST00000591470 RRS1Q15050 365 aaKnown RBP24.24■■□□□ 1.47
GCDH-216ENST00000591470 PIK3R4Q99570 1358 aa24.23■■□□□ 1.47
GCDH-216ENST00000591470 RLBP1P12271 317 aa24.23■■□□□ 1.47
GCDH-216ENST00000591470 HMOX1P09601 288 aa24.22■■□□□ 1.47
GCDH-216ENST00000591470 PHACTR3Q96KR7 559 aa24.22■■□□□ 1.47
GCDH-216ENST00000591470 USP31Q70CQ4 1352 aa24.22■■□□□ 1.47
GCDH-216ENST00000591470 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
GCDH-216ENST00000591470 ZKSCAN2Q63HK3 967 aa24.21■■□□□ 1.47
GCDH-216ENST00000591470 IGHDP01880 384 aa24.2■■□□□ 1.46
GCDH-216ENST00000591470 ZNF142P52746 1687 aaPredicted RBP24.2■■□□□ 1.46
GCDH-216ENST00000591470 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
GCDH-216ENST00000591470 TTC21AQ8NDW8 1320 aa24.18■■□□□ 1.46
GCDH-216ENST00000591470 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
GCDH-216ENST00000591470 IPO9Q96P70 1041 aaKnown RBP24.18■■□□□ 1.46
GCDH-216ENST00000591470 PEAK1Q9H792 1746 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms