RNA–Protein interactions for RNA: ENST00000590446.2

SBNO2-208, Transcript of strawberry notch homolog 2, humanhuman

TSL 2

Gene SBNO2, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-208ENST00000590446 LMOD2Q6P5Q4 547 aa21.43■■□□□ 1.02
SBNO2-208ENST00000590446 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
SBNO2-208ENST00000590446 CCDC61Q9Y6R9 512 aa21.43■■□□□ 1.02
SBNO2-208ENST00000590446 POLR3AO14802 1390 aaPredicted RBP21.43■■□□□ 1.02
SBNO2-208ENST00000590446 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
SBNO2-208ENST00000590446 HAP1P54257 671 aaPredicted RBP21.41■■□□□ 1.02
SBNO2-208ENST00000590446 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
SBNO2-208ENST00000590446 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
SBNO2-208ENST00000590446 PPIP5K1Q6PFW1 1433 aa21.4■■□□□ 1.02
SBNO2-208ENST00000590446 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
SBNO2-208ENST00000590446 EP400Q96L91 3159 aa21.4■■□□□ 1.02
SBNO2-208ENST00000590446 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
SBNO2-208ENST00000590446 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
SBNO2-208ENST00000590446 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
SBNO2-208ENST00000590446 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
SBNO2-208ENST00000590446 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
SBNO2-208ENST00000590446 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
SBNO2-208ENST00000590446 ACEP12821 1306 aa21.36■■□□□ 1.01
SBNO2-208ENST00000590446 VPS72Q15906 364 aa21.36■■□□□ 1.01
SBNO2-208ENST00000590446 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
SBNO2-208ENST00000590446 GLI3P10071 1580 aa21.35■■□□□ 1.01
SBNO2-208ENST00000590446 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
SBNO2-208ENST00000590446 BRD4O60885 1362 aaPredicted RBP21.33■■□□□ 1
SBNO2-208ENST00000590446 SLC24A1O60721 1099 aa21.31■■□□□ 1
SBNO2-208ENST00000590446 PLCH1Q4KWH8 1693 aa21.31■■□□□ 1
SBNO2-208ENST00000590446 AKAP12Q02952 1782 aa21.31■■□□□ 1
SBNO2-208ENST00000590446 CABP1Q9NZU7 370 aa21.3■■□□□ 1
SBNO2-208ENST00000590446 USP47Q96K76 1375 aa21.3■■□□□ 1
SBNO2-208ENST00000590446 PHRF1Q9P1Y6 1649 aaKnown RBP21.29■■□□□ 1
SBNO2-208ENST00000590446 COL14A1Q05707 1796 aaKnown RBP21.28■■□□□ 1
SBNO2-208ENST00000590446 ST20-MTHFSA0A0A6YYL1 179 aa21.28■■□□□ 1
SBNO2-208ENST00000590446 NRAPQ86VF7 1730 aa21.28■■□□□ 1
SBNO2-208ENST00000590446 CCDC125Q86Z20 511 aa21.27■■□□□ 1
SBNO2-208ENST00000590446 USP6P35125 1406 aa21.27■■□□□ 1
SBNO2-208ENST00000590446 SSH2Q76I76 1423 aa21.27■■□□□ 1
SBNO2-208ENST00000590446 USP19O94966 1318 aa21.26■□□□□ 0.99
SBNO2-208ENST00000590446 ABTB2Q8N961 1025 aa21.25■□□□□ 0.99
SBNO2-208ENST00000590446 MON2Q7Z3U7 1717 aa21.24■□□□□ 0.99
SBNO2-208ENST00000590446 TMC1Q8TDI8 760 aa21.23■□□□□ 0.99
SBNO2-208ENST00000590446 ZNF692Q9BU19 519 aaPredicted RBP21.23■□□□□ 0.99
SBNO2-208ENST00000590446 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
SBNO2-208ENST00000590446 CPDO75976 1380 aa21.23■□□□□ 0.99
SBNO2-208ENST00000590446 NUTM2GQ5VZR2 741 aa21.22■□□□□ 0.99
SBNO2-208ENST00000590446 BRWD3Q6RI45 1802 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 TMF1P82094 1093 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 PUS7Q96PZ0 661 aaKnown RBP21.21■□□□□ 0.99
SBNO2-208ENST00000590446 TESK2Q96S53 571 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 NRKQ7Z2Y5 1582 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
SBNO2-208ENST00000590446 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
SBNO2-208ENST00000590446 NLRP13Q86W25 1043 aa21.2■□□□□ 0.98
SBNO2-208ENST00000590446 PIK3C2AO00443 1686 aa21.19■□□□□ 0.98
SBNO2-208ENST00000590446 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
SBNO2-208ENST00000590446 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
SBNO2-208ENST00000590446 NINLQ9Y2I6 1382 aa21.19■□□□□ 0.98
SBNO2-208ENST00000590446 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
SBNO2-208ENST00000590446 CPSF1Q10570 1443 aaKnown RBP21.18■□□□□ 0.98
SBNO2-208ENST00000590446 CDCA8Q53HL2 280 aa21.17■□□□□ 0.98
SBNO2-208ENST00000590446 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
SBNO2-208ENST00000590446 TERF2IPQ9NYB0 399 aa21.16■□□□□ 0.98
SBNO2-208ENST00000590446 LMO7Q8WWI1 1683 aa21.15■□□□□ 0.98
SBNO2-208ENST00000590446 TTC21BQ7Z4L5 1316 aa21.15■□□□□ 0.98
SBNO2-208ENST00000590446 GCP02774 474 aa21.15■□□□□ 0.98
SBNO2-208ENST00000590446 NLRP6P59044 892 aa21.15■□□□□ 0.98
SBNO2-208ENST00000590446 SPATA31A1Q5TZJ5 1347 aa21.14■□□□□ 0.97
SBNO2-208ENST00000590446 SRCAPQ6ZRS2 3230 aa21.14■□□□□ 0.97
SBNO2-208ENST00000590446 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
SBNO2-208ENST00000590446 BLMP54132 1417 aaPredicted RBP21.13■□□□□ 0.97
SBNO2-208ENST00000590446 ZC3H6P61129 1189 aaKnown RBP21.13■□□□□ 0.97
SBNO2-208ENST00000590446 SLC12A5Q9H2X9 1139 aa21.13■□□□□ 0.97
SBNO2-208ENST00000590446 CCDC9Q9Y3X0 531 aaKnown RBP21.13■□□□□ 0.97
SBNO2-208ENST00000590446 SLIT3O75094 1523 aa21.13■□□□□ 0.97
SBNO2-208ENST00000590446 CD163L1Q9NR16 1453 aa21.13■□□□□ 0.97
SBNO2-208ENST00000590446 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
SBNO2-208ENST00000590446 EIF4G2P78344 907 aaKnown RBP eCLIP21.12■□□□□ 0.97
SBNO2-208ENST00000590446 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
SBNO2-208ENST00000590446 A0A1W2PP64 1363 aa21.11■□□□□ 0.97
SBNO2-208ENST00000590446 EDC4Q6P2E9 1401 aaKnown RBP21.11■□□□□ 0.97
SBNO2-208ENST00000590446 USP54Q70EL1 1684 aa21.09■□□□□ 0.97
SBNO2-208ENST00000590446 CHRNA2Q15822 529 aa21.09■□□□□ 0.97
SBNO2-208ENST00000590446 FAM98CQ17RN3 349 aaKnown RBP21.09■□□□□ 0.97
SBNO2-208ENST00000590446 BARGINQ6ZT62 677 aa21.09■□□□□ 0.97
SBNO2-208ENST00000590446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.09■□□□□ 0.97
SBNO2-208ENST00000590446 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
SBNO2-208ENST00000590446 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
SBNO2-208ENST00000590446 KCNH5Q8NCM2 988 aa21.07■□□□□ 0.96
SBNO2-208ENST00000590446 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
SBNO2-208ENST00000590446 MYOM1P52179 1685 aa21.06■□□□□ 0.96
SBNO2-208ENST00000590446 COL18A1P39060 1754 aa21.06■□□□□ 0.96
SBNO2-208ENST00000590446 THRAP3Q9Y2W1 955 aaKnown RBP21.05■□□□□ 0.96
SBNO2-208ENST00000590446 USP31Q70CQ4 1352 aa21.05■□□□□ 0.96
SBNO2-208ENST00000590446 HSPA5P11021 654 aaKnown RBP21.04■□□□□ 0.96
SBNO2-208ENST00000590446 COL5A2P05997 1499 aaPredicted RBP21.03■□□□□ 0.96
SBNO2-208ENST00000590446 SOX12O15370 315 aa21.03■□□□□ 0.96
SBNO2-208ENST00000590446 EVA1CP58658 441 aa21.03■□□□□ 0.96
SBNO2-208ENST00000590446 ARHGEF25Q86VW2 580 aa21.03■□□□□ 0.96
SBNO2-208ENST00000590446 NME9Q86XW9 330 aa21.03■□□□□ 0.96
SBNO2-208ENST00000590446 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms