RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 EP400Q96L91 3159 aa27.7■■■□□ 2.02
PDCD5-207ENST00000590247 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
PDCD5-207ENST00000590247 NRAPQ86VF7 1730 aa27.69■■■□□ 2.02
PDCD5-207ENST00000590247 QRICH2Q9H0J4 1663 aa27.67■■■□□ 2.02
PDCD5-207ENST00000590247 COL14A1Q05707 1796 aaKnown RBP27.66■■■□□ 2.02
PDCD5-207ENST00000590247 POLR3AO14802 1390 aaPredicted RBP27.66■■■□□ 2.02
PDCD5-207ENST00000590247 PAK3O75914 559 aaPredicted RBP27.64■■■□□ 2.02
PDCD5-207ENST00000590247 CCDC61Q9Y6R9 512 aa27.64■■■□□ 2.02
PDCD5-207ENST00000590247 NEUROD1Q13562 356 aa27.63■■■□□ 2.01
PDCD5-207ENST00000590247 CENPJQ9HC77 1338 aaPredicted RBP27.63■■■□□ 2.01
PDCD5-207ENST00000590247 PLEKHG3A1L390 1219 aa27.62■■■□□ 2.01
PDCD5-207ENST00000590247 ONECUT3O60422 494 aaPredicted RBP27.62■■■□□ 2.01
PDCD5-207ENST00000590247 ACEP12821 1306 aa27.62■■■□□ 2.01
PDCD5-207ENST00000590247 PHRF1Q9P1Y6 1649 aaKnown RBP27.6■■■□□ 2.01
PDCD5-207ENST00000590247 NBPF8Q3BBV2 869 aa27.6■■■□□ 2.01
PDCD5-207ENST00000590247 BTG4Q9NY30 223 aa27.6■■■□□ 2.01
PDCD5-207ENST00000590247 SEPT12Q8IYM1 358 aa27.59■■■□□ 2.01
PDCD5-207ENST00000590247 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
PDCD5-207ENST00000590247 CCDC125Q86Z20 511 aa27.57■■■□□ 2
PDCD5-207ENST00000590247 ROCK2O75116 1388 aaKnown RBP27.55■■■□□ 2
PDCD5-207ENST00000590247 SRPK2P78362 688 aaKnown RBP27.54■■■□□ 2
PDCD5-207ENST00000590247 PPIP5K1Q6PFW1 1433 aa27.54■■■□□ 2
PDCD5-207ENST00000590247 CABP2Q9NPB3 220 aa27.54■■■□□ 2
PDCD5-207ENST00000590247 KIAA0232Q92628 1395 aa27.52■■■□□ 2
PDCD5-207ENST00000590247 NUTM2GQ5VZR2 741 aa27.52■■■□□ 2
PDCD5-207ENST00000590247 PRDM11Q9NQV5 511 aa27.52■■■□□ 2
PDCD5-207ENST00000590247 BLMP54132 1417 aaPredicted RBP27.5■■□□□ 1.99
PDCD5-207ENST00000590247 TONSLQ96HA7 1378 aa27.49■■□□□ 1.99
PDCD5-207ENST00000590247 SPATA31A5Q5VU36 1347 aa27.49■■□□□ 1.99
PDCD5-207ENST00000590247 SPATA31A7Q8IWB4 1347 aa27.49■■□□□ 1.99
PDCD5-207ENST00000590247 NRKQ7Z2Y5 1582 aa27.49■■□□□ 1.99
PDCD5-207ENST00000590247 FAM98CQ17RN3 349 aaKnown RBP27.48■■□□□ 1.99
PDCD5-207ENST00000590247 KRT27Q7Z3Y8 459 aa27.48■■□□□ 1.99
PDCD5-207ENST00000590247 CHRNA2Q15822 529 aa27.47■■□□□ 1.99
PDCD5-207ENST00000590247 ABTB2Q8N961 1025 aa27.47■■□□□ 1.99
PDCD5-207ENST00000590247 BRD4O60885 1362 aaPredicted RBP27.47■■□□□ 1.99
PDCD5-207ENST00000590247 USP19O94966 1318 aa27.46■■□□□ 1.99
PDCD5-207ENST00000590247 ZC3H6P61129 1189 aaKnown RBP27.46■■□□□ 1.99
PDCD5-207ENST00000590247 THSD7AQ9UPZ6 1657 aa27.46■■□□□ 1.99
PDCD5-207ENST00000590247 CABP1Q9NZU7 370 aa27.45■■□□□ 1.98
PDCD5-207ENST00000590247 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
PDCD5-207ENST00000590247 SBNO2Q9Y2G9 1366 aa27.43■■□□□ 1.98
PDCD5-207ENST00000590247 USP6P35125 1406 aa27.42■■□□□ 1.98
PDCD5-207ENST00000590247 LMO7Q8WWI1 1683 aa27.42■■□□□ 1.98
PDCD5-207ENST00000590247 CPDO75976 1380 aa27.41■■□□□ 1.98
PDCD5-207ENST00000590247 A0A0G2JS52 829 aa27.41■■□□□ 1.98
PDCD5-207ENST00000590247 MYT1Q01538 1121 aa27.41■■□□□ 1.98
PDCD5-207ENST00000590247 SPATA31A1Q5TZJ5 1347 aa27.41■■□□□ 1.98
PDCD5-207ENST00000590247 NLRP13Q86W25 1043 aa27.4■■□□□ 1.98
PDCD5-207ENST00000590247 SSH2Q76I76 1423 aa27.4■■□□□ 1.98
PDCD5-207ENST00000590247 CAMTA1Q9Y6Y1 1673 aa27.4■■□□□ 1.98
PDCD5-207ENST00000590247 AKAP12Q02952 1782 aa27.38■■□□□ 1.97
PDCD5-207ENST00000590247 DEFB132Q7Z7B7 95 aa27.38■■□□□ 1.97
PDCD5-207ENST00000590247 STRN4Q9NRL3 753 aa27.38■■□□□ 1.97
PDCD5-207ENST00000590247 ZRANB1Q9UGI0 708 aa27.38■■□□□ 1.97
PDCD5-207ENST00000590247 GCP02774 474 aa27.37■■□□□ 1.97
PDCD5-207ENST00000590247 CARD11Q9BXL7 1154 aa27.36■■□□□ 1.97
PDCD5-207ENST00000590247 PIK3C2AO00443 1686 aa27.36■■□□□ 1.97
PDCD5-207ENST00000590247 SF3B2Q13435 895 aaKnown RBP27.35■■□□□ 1.97
PDCD5-207ENST00000590247 SLIT3O75094 1523 aa27.35■■□□□ 1.97
PDCD5-207ENST00000590247 NLRP6P59044 892 aa27.32■■□□□ 1.96
PDCD5-207ENST00000590247 FAM182BQ5T319 152 aa27.32■■□□□ 1.96
PDCD5-207ENST00000590247 RGPD1P0DJD0 1748 aa27.32■■□□□ 1.96
PDCD5-207ENST00000590247 EVA1CP58658 441 aa27.31■■□□□ 1.96
PDCD5-207ENST00000590247 LARP1Q6PKG0 1096 aaKnown RBP27.3■■□□□ 1.96
PDCD5-207ENST00000590247 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
PDCD5-207ENST00000590247 BARGINQ6ZT62 677 aa27.29■■□□□ 1.96
PDCD5-207ENST00000590247 CPSF1Q10570 1443 aaKnown RBP27.29■■□□□ 1.96
PDCD5-207ENST00000590247 SRCAPQ6ZRS2 3230 aa27.29■■□□□ 1.96
PDCD5-207ENST00000590247 COL18A1P39060 1754 aa27.28■■□□□ 1.96
PDCD5-207ENST00000590247 MON2Q7Z3U7 1717 aa27.28■■□□□ 1.96
PDCD5-207ENST00000590247 COL5A2P05997 1499 aaPredicted RBP27.28■■□□□ 1.96
PDCD5-207ENST00000590247 USP35Q9P2H5 1018 aa27.28■■□□□ 1.96
PDCD5-207ENST00000590247 TNS1Q9HBL0 1735 aaKnown RBP27.27■■□□□ 1.96
PDCD5-207ENST00000590247 TTC21BQ7Z4L5 1316 aa27.27■■□□□ 1.96
PDCD5-207ENST00000590247 CLSPNQ9HAW4 1339 aa27.25■■□□□ 1.95
PDCD5-207ENST00000590247 BAG6P46379 1132 aa27.25■■□□□ 1.95
PDCD5-207ENST00000590247 AATKQ6ZMQ8 1374 aa27.24■■□□□ 1.95
PDCD5-207ENST00000590247 TCP11L2Q8N4U5 519 aa27.24■■□□□ 1.95
PDCD5-207ENST00000590247 PUS7Q96PZ0 661 aaKnown RBP27.23■■□□□ 1.95
PDCD5-207ENST00000590247 TTC21AQ8NDW8 1320 aa27.22■■□□□ 1.95
PDCD5-207ENST00000590247 THRAP3Q9Y2W1 955 aaKnown RBP27.22■■□□□ 1.95
PDCD5-207ENST00000590247 PARP4Q9UKK3 1724 aaKnown RBP27.21■■□□□ 1.95
PDCD5-207ENST00000590247 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
PDCD5-207ENST00000590247 DISP2A7MBM2 1401 aa27.21■■□□□ 1.95
PDCD5-207ENST00000590247 CRB1P82279 1406 aa27.21■■□□□ 1.95
PDCD5-207ENST00000590247 KTN1Q86UP2 1357 aaKnown RBP27.21■■□□□ 1.95
PDCD5-207ENST00000590247 RGPD5Q99666 1765 aa27.2■■□□□ 1.95
PDCD5-207ENST00000590247 FAM196AQ6ZSG2 479 aa27.2■■□□□ 1.94
PDCD5-207ENST00000590247 TIMELESSQ9UNS1 1208 aa27.2■■□□□ 1.94
PDCD5-207ENST00000590247 USP54Q70EL1 1684 aa27.2■■□□□ 1.94
PDCD5-207ENST00000590247 CD163L1Q9NR16 1453 aa27.19■■□□□ 1.94
PDCD5-207ENST00000590247 ZBTB7CA1YPR0 619 aa27.19■■□□□ 1.94
PDCD5-207ENST00000590247 EN1Q05925 392 aaPredicted RBP27.19■■□□□ 1.94
PDCD5-207ENST00000590247 ARHGEF25Q86VW2 580 aa27.17■■□□□ 1.94
PDCD5-207ENST00000590247 AXIN2Q9Y2T1 843 aa27.17■■□□□ 1.94
PDCD5-207ENST00000590247 NFAT5O94916 1531 aa27.16■■□□□ 1.94
PDCD5-207ENST00000590247 PDE3BQ13370 1112 aa27.16■■□□□ 1.94
PDCD5-207ENST00000590247 KCNH5Q8NCM2 988 aa27.16■■□□□ 1.94
PDCD5-207ENST00000590247 WNK3Q9BYP7 1800 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms