RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
NEDD4L-227ENST00000590020 SIRT1Q96EB6 747 aa19.18■□□□□ 0.66
NEDD4L-227ENST00000590020 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
NEDD4L-227ENST00000590020 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
NEDD4L-227ENST00000590020 NUP188Q5SRE5 1749 aa19.17■□□□□ 0.66
NEDD4L-227ENST00000590020 FAM196AQ6ZSG2 479 aa19.16■□□□□ 0.66
NEDD4L-227ENST00000590020 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
NEDD4L-227ENST00000590020 STRN4Q9NRL3 753 aa19.16■□□□□ 0.66
NEDD4L-227ENST00000590020 RREB1Q92766 1687 aa19.16■□□□□ 0.66
NEDD4L-227ENST00000590020 CRYBG1Q9Y4K1 1723 aa19.16■□□□□ 0.66
NEDD4L-227ENST00000590020 CHRNA2Q15822 529 aa19.15■□□□□ 0.66
NEDD4L-227ENST00000590020 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
NEDD4L-227ENST00000590020 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
NEDD4L-227ENST00000590020 PPP1R1BQ9UD71 204 aaPredicted RBP19.15■□□□□ 0.66
NEDD4L-227ENST00000590020 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
NEDD4L-227ENST00000590020 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
NEDD4L-227ENST00000590020 POGKQ9P215 609 aa19.14■□□□□ 0.65
NEDD4L-227ENST00000590020 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
NEDD4L-227ENST00000590020 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
NEDD4L-227ENST00000590020 ACIN1Q9UKV3 1341 aaKnown RBP19.13■□□□□ 0.65
NEDD4L-227ENST00000590020 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
NEDD4L-227ENST00000590020 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
NEDD4L-227ENST00000590020 CAMTA1Q9Y6Y1 1673 aa19.13■□□□□ 0.65
NEDD4L-227ENST00000590020 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
NEDD4L-227ENST00000590020 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
NEDD4L-227ENST00000590020 KIAA0232Q92628 1395 aa19.11■□□□□ 0.65
NEDD4L-227ENST00000590020 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
NEDD4L-227ENST00000590020 NBPF14Q5TI25 921 aa19.1■□□□□ 0.65
NEDD4L-227ENST00000590020 SPON1Q9HCB6 807 aa19.1■□□□□ 0.65
NEDD4L-227ENST00000590020 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
NEDD4L-227ENST00000590020 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.64
NEDD4L-227ENST00000590020 KCNQ2O43526 872 aa19.08■□□□□ 0.64
NEDD4L-227ENST00000590020 ZC3H6P61129 1189 aaKnown RBP19.08■□□□□ 0.64
NEDD4L-227ENST00000590020 PDE3BQ13370 1112 aa19.08■□□□□ 0.64
NEDD4L-227ENST00000590020 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.64
NEDD4L-227ENST00000590020 NUTM2GQ5VZR2 741 aa19.07■□□□□ 0.64
NEDD4L-227ENST00000590020 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
NEDD4L-227ENST00000590020 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
NEDD4L-227ENST00000590020 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
NEDD4L-227ENST00000590020 PHRF1Q9P1Y6 1649 aaKnown RBP19.05■□□□□ 0.64
NEDD4L-227ENST00000590020 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
NEDD4L-227ENST00000590020 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
NEDD4L-227ENST00000590020 EVA1CP58658 441 aa19.03■□□□□ 0.64
NEDD4L-227ENST00000590020 SSH2Q76I76 1423 aa19.02■□□□□ 0.64
NEDD4L-227ENST00000590020 LARP1Q6PKG0 1096 aaKnown RBP19.02■□□□□ 0.64
NEDD4L-227ENST00000590020 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
NEDD4L-227ENST00000590020 BARGINQ6ZT62 677 aa19.01■□□□□ 0.63
NEDD4L-227ENST00000590020 ZNF784Q8NCA9 323 aaPredicted RBP19■□□□□ 0.63
NEDD4L-227ENST00000590020 PDGFDQ9GZP0 370 aaPredicted RBP19■□□□□ 0.63
NEDD4L-227ENST00000590020 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
NEDD4L-227ENST00000590020 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
NEDD4L-227ENST00000590020 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
NEDD4L-227ENST00000590020 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
NEDD4L-227ENST00000590020 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
NEDD4L-227ENST00000590020 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
NEDD4L-227ENST00000590020 ZBTB7AO95365 584 aa18.96■□□□□ 0.63
NEDD4L-227ENST00000590020 CASZ1Q86V15 1759 aa18.96■□□□□ 0.63
NEDD4L-227ENST00000590020 MYOM1P52179 1685 aa18.95■□□□□ 0.62
NEDD4L-227ENST00000590020 PTF1AQ7RTS3 328 aa18.95■□□□□ 0.62
NEDD4L-227ENST00000590020 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
NEDD4L-227ENST00000590020 ATP7BP35670 1465 aa18.94■□□□□ 0.62
NEDD4L-227ENST00000590020 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
NEDD4L-227ENST00000590020 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
NEDD4L-227ENST00000590020 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
NEDD4L-227ENST00000590020 UTRNP46939 3433 aa18.93■□□□□ 0.62
NEDD4L-227ENST00000590020 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-227ENST00000590020 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
NEDD4L-227ENST00000590020 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
NEDD4L-227ENST00000590020 ZBTB7CA1YPR0 619 aa18.9■□□□□ 0.62
NEDD4L-227ENST00000590020 PTGER2P43116 358 aa18.9■□□□□ 0.62
NEDD4L-227ENST00000590020 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
NEDD4L-227ENST00000590020 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
NEDD4L-227ENST00000590020 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 ACEP12821 1306 aa18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 OVOS2A0A0G2JMS6 1433 aa18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
NEDD4L-227ENST00000590020 PLSCR1O15162 318 aa18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 PROM2Q8N271 834 aa18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 FHDC1Q9C0D6 1143 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 RGPD3A6NKT7 1758 aaPredicted RBP18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 RGPD4Q7Z3J3 1758 aa18.88■□□□□ 0.61
NEDD4L-227ENST00000590020 LRRC37A3O60309 1634 aa18.87■□□□□ 0.61
NEDD4L-227ENST00000590020 C1QTNF8P60827 252 aa18.87■□□□□ 0.61
NEDD4L-227ENST00000590020 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
NEDD4L-227ENST00000590020 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
NEDD4L-227ENST00000590020 CPDO75976 1380 aa18.86■□□□□ 0.61
NEDD4L-227ENST00000590020 SYT17Q9BSW7 474 aa18.86■□□□□ 0.61
NEDD4L-227ENST00000590020 POLR3AO14802 1390 aaPredicted RBP18.85■□□□□ 0.61
NEDD4L-227ENST00000590020 TOPAZ1Q8N9V7 1692 aa18.85■□□□□ 0.61
NEDD4L-227ENST00000590020 CRB1P82279 1406 aa18.84■□□□□ 0.61
NEDD4L-227ENST00000590020 USP19O94966 1318 aa18.84■□□□□ 0.61
NEDD4L-227ENST00000590020 GCP02774 474 aa18.84■□□□□ 0.61
NEDD4L-227ENST00000590020 DDB1Q16531 1140 aa18.84■□□□□ 0.61
NEDD4L-227ENST00000590020 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
NEDD4L-227ENST00000590020 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
NEDD4L-227ENST00000590020 CHD4Q14839 1912 aa18.82■□□□□ 0.6
NEDD4L-227ENST00000590020 C11orf95C9JLR9 678 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms