RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	NGLY1	Q96IV0	654 aa		24.56	■■□□□ 1.52
MBD1-221	ENST00000589867	SSH2	Q76I76	1423 aa		24.54	■■□□□ 1.52
MBD1-221	ENST00000589867	BCL9L	Q86UU0	1499 aa		24.54	■■□□□ 1.52
MBD1-221	ENST00000589867	PLEKHG5	O94827	1062 aa		24.53	■■□□□ 1.52
MBD1-221	ENST00000589867	SLIT2	O94813	1529 aa		24.52	■■□□□ 1.52
MBD1-221	ENST00000589867	PAK3	O75914	559 aa	Predicted RBP	24.52	■■□□□ 1.52
MBD1-221	ENST00000589867	USP47	Q96K76	1375 aa		24.52	■■□□□ 1.52
MBD1-221	ENST00000589867	USP6	P35125	1406 aa		24.52	■■□□□ 1.52
MBD1-221	ENST00000589867	AKAP12	Q02952	1782 aa		24.51	■■□□□ 1.51
MBD1-221	ENST00000589867	ATAD2	Q6PL18	1390 aa		24.5	■■□□□ 1.51
MBD1-221	ENST00000589867	CPSF1	Q10570	1443 aa	Known RBP	24.5	■■□□□ 1.51
MBD1-221	ENST00000589867	QTRT2	Q9H974	415 aa	Known RBP	24.49	■■□□□ 1.51
MBD1-221	ENST00000589867	USP21	Q9UK80	565 aa		24.49	■■□□□ 1.51
MBD1-221	ENST00000589867	ATRN	O75882	1429 aa		24.49	■■□□□ 1.51
MBD1-221	ENST00000589867	CD163L1	Q9NR16	1453 aa		24.49	■■□□□ 1.51
MBD1-221	ENST00000589867	PHRF1	Q9P1Y6	1649 aa	Known RBP	24.49	■■□□□ 1.51
MBD1-221	ENST00000589867	FAM83G	A6ND36	823 aa		24.47	■■□□□ 1.51
MBD1-221	ENST00000589867	NUTM2G	Q5VZR2	741 aa		24.47	■■□□□ 1.51
MBD1-221	ENST00000589867	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	24.47	■■□□□ 1.51
MBD1-221	ENST00000589867	PLCH1	Q4KWH8	1693 aa		24.46	■■□□□ 1.51
MBD1-221	ENST00000589867	NRK	Q7Z2Y5	1582 aa		24.46	■■□□□ 1.51
MBD1-221	ENST00000589867	BRD4	O60885	1362 aa	Predicted RBP	24.45	■■□□□ 1.5
MBD1-221	ENST00000589867	RXRB	P28702	533 aa		24.45	■■□□□ 1.5
MBD1-221	ENST00000589867	USP19	O94966	1318 aa		24.44	■■□□□ 1.5
MBD1-221	ENST00000589867	PUS7	Q96PZ0	661 aa	Known RBP	24.44	■■□□□ 1.5
MBD1-221	ENST00000589867	MON2	Q7Z3U7	1717 aa		24.44	■■□□□ 1.5
MBD1-221	ENST00000589867	PIK3C2A	O00443	1686 aa		24.43	■■□□□ 1.5
MBD1-221	ENST00000589867	SLC12A5	Q9H2X9	1139 aa		24.43	■■□□□ 1.5
MBD1-221	ENST00000589867	NWD2	Q9ULI1	1742 aa		24.43	■■□□□ 1.5
MBD1-221	ENST00000589867	CDK12	Q9NYV4	1490 aa	Predicted RBP	24.43	■■□□□ 1.5
MBD1-221	ENST00000589867	HAP1	P54257	671 aa	Predicted RBP	24.42	■■□□□ 1.5
MBD1-221	ENST00000589867	RBM6	P78332	1123 aa	Known RBP	24.42	■■□□□ 1.5
MBD1-221	ENST00000589867	ABTB2	Q8N961	1025 aa		24.42	■■□□□ 1.5
MBD1-221	ENST00000589867	TRPC5	Q9UL62	973 aa	Predicted RBP	24.42	■■□□□ 1.5
MBD1-221	ENST00000589867	UNC5CL	Q8IV45	518 aa		24.41	■■□□□ 1.5
MBD1-221	ENST00000589867	RGS12	O14924	1447 aa		24.41	■■□□□ 1.5
MBD1-221	ENST00000589867	NRAP	Q86VF7	1730 aa		24.41	■■□□□ 1.5
MBD1-221	ENST00000589867	TTC21B	Q7Z4L5	1316 aa		24.4	■■□□□ 1.5
MBD1-221	ENST00000589867	ZNF692	Q9BU19	519 aa	Predicted RBP	24.4	■■□□□ 1.5
MBD1-221	ENST00000589867	COL14A1	Q05707	1796 aa	Known RBP	24.39	■■□□□ 1.5
MBD1-221	ENST00000589867	GLI3	P10071	1580 aa		24.38	■■□□□ 1.49
MBD1-221	ENST00000589867	KIAA0232	Q92628	1395 aa		24.38	■■□□□ 1.49
MBD1-221	ENST00000589867	SLIT3	O75094	1523 aa		24.37	■■□□□ 1.49
MBD1-221	ENST00000589867	KTN1	Q86UP2	1357 aa	Known RBP	24.37	■■□□□ 1.49
MBD1-221	ENST00000589867	NLRP13	Q86W25	1043 aa		24.35	■■□□□ 1.49
MBD1-221	ENST00000589867	TMC1	Q8TDI8	760 aa		24.35	■■□□□ 1.49
MBD1-221	ENST00000589867	GJD4	Q96KN9	370 aa	Predicted RBP	24.35	■■□□□ 1.49
MBD1-221	ENST00000589867		A0A1W2PP64	1363 aa		24.34	■■□□□ 1.49
MBD1-221	ENST00000589867	ZC3H6	P61129	1189 aa	Known RBP	24.34	■■□□□ 1.49
MBD1-221	ENST00000589867	CPD	O75976	1380 aa		24.33	■■□□□ 1.49
MBD1-221	ENST00000589867	GC	P02774	474 aa		24.33	■■□□□ 1.49
MBD1-221	ENST00000589867	NLRP6	P59044	892 aa		24.33	■■□□□ 1.49
MBD1-221	ENST00000589867	CHRNA2	Q15822	529 aa		24.33	■■□□□ 1.49
MBD1-221	ENST00000589867	BTG4	Q9NY30	223 aa		24.33	■■□□□ 1.49
MBD1-221	ENST00000589867	TTC21A	Q8NDW8	1320 aa		24.33	■■□□□ 1.48
MBD1-221	ENST00000589867	LMO7	Q8WWI1	1683 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	SLC24A1	O60721	1099 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	TMF1	P82094	1093 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	VPS72	Q15906	364 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	PRDM11	Q9NQV5	511 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	ZRANB1	Q9UGI0	708 aa		24.32	■■□□□ 1.48
MBD1-221	ENST00000589867	USP54	Q70EL1	1684 aa		24.3	■■□□□ 1.48
MBD1-221	ENST00000589867	NINL	Q9Y2I6	1382 aa		24.29	■■□□□ 1.48
MBD1-221	ENST00000589867	CAMTA1	Q9Y6Y1	1673 aa		24.29	■■□□□ 1.48
MBD1-221	ENST00000589867	EDC4	Q6P2E9	1401 aa	Known RBP	24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	HSPA5	P11021	654 aa	Known RBP	24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	NME9	Q86XW9	330 aa		24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	COL18A1	P39060	1754 aa		24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	USP31	Q70CQ4	1352 aa		24.28	■■□□□ 1.48
MBD1-221	ENST00000589867	MYOM1	P52179	1685 aa		24.27	■■□□□ 1.48
MBD1-221	ENST00000589867	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	24.27	■■□□□ 1.48
MBD1-221	ENST00000589867	NFAT5	O94916	1531 aa		24.26	■■□□□ 1.47
MBD1-221	ENST00000589867	TERF2IP	Q9NYB0	399 aa		24.26	■■□□□ 1.47
MBD1-221	ENST00000589867	ONECUT3	O60422	494 aa	Predicted RBP	24.24	■■□□□ 1.47
MBD1-221	ENST00000589867	ANKRD36B	Q8N2N9	1353 aa		24.24	■■□□□ 1.47
MBD1-221	ENST00000589867	EIF4G2	P78344	907 aa	Known RBP eCLIP	24.23	■■□□□ 1.47
MBD1-221	ENST00000589867	SPATA31A5	Q5VU36	1347 aa		24.23	■■□□□ 1.47
MBD1-221	ENST00000589867	SPATA31A7	Q8IWB4	1347 aa		24.23	■■□□□ 1.47
MBD1-221	ENST00000589867	BRWD3	Q6RI45	1802 aa		24.23	■■□□□ 1.47
MBD1-221	ENST00000589867	OVOS2	A0A0J9YW53	1432 aa		24.22	■■□□□ 1.47
MBD1-221	ENST00000589867	OVOS2	Q6IE36	1432 aa		24.22	■■□□□ 1.47
MBD1-221	ENST00000589867	EP400	Q96L91	3159 aa		24.22	■■□□□ 1.47
MBD1-221	ENST00000589867	ARHGEF25	Q86VW2	580 aa		24.21	■■□□□ 1.47
MBD1-221	ENST00000589867	AATK	Q6ZMQ8	1374 aa		24.2	■■□□□ 1.46
MBD1-221	ENST00000589867	C11orf95	C9JLR9	678 aa	Predicted RBP	24.19	■■□□□ 1.46
MBD1-221	ENST00000589867	CDCA8	Q53HL2	280 aa		24.19	■■□□□ 1.46
MBD1-221	ENST00000589867	UPF1	Q92900	1129 aa	Known RBP eCLIP	24.19	■■□□□ 1.46
MBD1-221	ENST00000589867	COL5A2	P05997	1499 aa	Predicted RBP	24.19	■■□□□ 1.46
MBD1-221	ENST00000589867	AXIN2	Q9Y2T1	843 aa		24.18	■■□□□ 1.46
MBD1-221	ENST00000589867	CCDC9	Q9Y3X0	531 aa	Known RBP	24.18	■■□□□ 1.46
MBD1-221	ENST00000589867	RGPD5	Q99666	1765 aa		24.18	■■□□□ 1.46
MBD1-221	ENST00000589867	SPATA31A1	Q5TZJ5	1347 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	SOX12	O15370	315 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	SEPT12	Q8IYM1	358 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	KCNH5	Q8NCM2	988 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	CARD14	Q9BXL6	1004 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	STRN4	Q9NRL3	753 aa		24.17	■■□□□ 1.46
MBD1-221	ENST00000589867	THSD7A	Q9UPZ6	1657 aa		24.16	■■□□□ 1.46
MBD1-221	ENST00000589867	LARP1	Q6PKG0	1096 aa	Known RBP	24.16	■■□□□ 1.46

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