RNA–Protein interactions for RNA: ENST00000589634.1

SMAD7-207, Transcript of SMAD family member 7, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene SMAD7, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-207ENST00000589634 QTRT2Q9H974 415 aaKnown RBP27.22■■□□□ 1.95
SMAD7-207ENST00000589634 USP47Q96K76 1375 aa27.22■■□□□ 1.95
SMAD7-207ENST00000589634 SOCS7O14512 581 aa27.21■■□□□ 1.95
SMAD7-207ENST00000589634 RXRBP28702 533 aa27.21■■□□□ 1.95
SMAD7-207ENST00000589634 FNBP4Q8N3X1 1017 aaPredicted RBP27.21■■□□□ 1.95
SMAD7-207ENST00000589634 BRD4O60885 1362 aaPredicted RBP27.21■■□□□ 1.95
SMAD7-207ENST00000589634 TMC1Q8TDI8 760 aa27.2■■□□□ 1.94
SMAD7-207ENST00000589634 PUS7Q96PZ0 661 aaKnown RBP27.2■■□□□ 1.94
SMAD7-207ENST00000589634 TOPAZ1Q8N9V7 1692 aa27.18■■□□□ 1.94
SMAD7-207ENST00000589634 TMF1P82094 1093 aa27.18■■□□□ 1.94
SMAD7-207ENST00000589634 NUTM2GQ5VZR2 741 aa27.17■■□□□ 1.94
SMAD7-207ENST00000589634 TESK2Q96S53 571 aa27.17■■□□□ 1.94
SMAD7-207ENST00000589634 TRPC5Q9UL62 973 aaPredicted RBP27.17■■□□□ 1.94
SMAD7-207ENST00000589634 NLRP13Q86W25 1043 aa27.16■■□□□ 1.94
SMAD7-207ENST00000589634 CDCA8Q53HL2 280 aa27.15■■□□□ 1.94
SMAD7-207ENST00000589634 TRPM3Q9HCF6 1732 aaPredicted RBP27.14■■□□□ 1.94
SMAD7-207ENST00000589634 RBM6P78332 1123 aaKnown RBP27.14■■□□□ 1.94
SMAD7-207ENST00000589634 HDGFL2Q7Z4V5 671 aaPredicted RBP27.14■■□□□ 1.94
SMAD7-207ENST00000589634 TERF2IPQ9NYB0 399 aa27.13■■□□□ 1.93
SMAD7-207ENST00000589634 USP6P35125 1406 aa27.13■■□□□ 1.93
SMAD7-207ENST00000589634 KTN1Q86UP2 1357 aaKnown RBP27.1■■□□□ 1.93
SMAD7-207ENST00000589634 UNC5CLQ8IV45 518 aa27.1■■□□□ 1.93
SMAD7-207ENST00000589634 PRDM11Q9NQV5 511 aa27.1■■□□□ 1.93
SMAD7-207ENST00000589634 ALS2Q96Q42 1657 aa27.09■■□□□ 1.93
SMAD7-207ENST00000589634 FAM83GA6ND36 823 aa27.09■■□□□ 1.93
SMAD7-207ENST00000589634 NLRP6P59044 892 aa27.09■■□□□ 1.93
SMAD7-207ENST00000589634 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
SMAD7-207ENST00000589634 EIF4G2P78344 907 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMAD7-207ENST00000589634 TTC21AQ8NDW8 1320 aa27.07■■□□□ 1.92
SMAD7-207ENST00000589634 NINLQ9Y2I6 1382 aa27.07■■□□□ 1.92
SMAD7-207ENST00000589634 TTC21BQ7Z4L5 1316 aa27.06■■□□□ 1.92
SMAD7-207ENST00000589634 ZC3H6P61129 1189 aaKnown RBP27.05■■□□□ 1.92
SMAD7-207ENST00000589634 CCDC9Q9Y3X0 531 aaKnown RBP27.05■■□□□ 1.92
SMAD7-207ENST00000589634 CPSF1Q10570 1443 aaKnown RBP27.05■■□□□ 1.92
SMAD7-207ENST00000589634 BCL9LQ86UU0 1499 aa27.05■■□□□ 1.92
SMAD7-207ENST00000589634 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
SMAD7-207ENST00000589634 SLIT2O94813 1529 aa27.03■■□□□ 1.92
SMAD7-207ENST00000589634 GCP02774 474 aa27.02■■□□□ 1.92
SMAD7-207ENST00000589634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.02■■□□□ 1.92
SMAD7-207ENST00000589634 GJD4Q96KN9 370 aaPredicted RBP27.02■■□□□ 1.92
SMAD7-207ENST00000589634 ATRNO75882 1429 aa27.01■■□□□ 1.91
SMAD7-207ENST00000589634 SSH2Q76I76 1423 aa27.01■■□□□ 1.91
SMAD7-207ENST00000589634 USP19O94966 1318 aa27.01■■□□□ 1.91
SMAD7-207ENST00000589634 MARF1Q9Y4F3 1742 aaKnown RBP27.01■■□□□ 1.91
SMAD7-207ENST00000589634 KIAA0232Q92628 1395 aa27■■□□□ 1.91
SMAD7-207ENST00000589634 CDK12Q9NYV4 1490 aaPredicted RBP27■■□□□ 1.91
SMAD7-207ENST00000589634 VPS72Q15906 364 aa26.99■■□□□ 1.91
SMAD7-207ENST00000589634 KCNH5Q8NCM2 988 aa26.99■■□□□ 1.91
SMAD7-207ENST00000589634 CHRNA2Q15822 529 aa26.98■■□□□ 1.91
SMAD7-207ENST00000589634 ABCA3Q99758 1704 aa26.96■■□□□ 1.91
SMAD7-207ENST00000589634 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
SMAD7-207ENST00000589634 HSPA5P11021 654 aaKnown RBP26.96■■□□□ 1.91
SMAD7-207ENST00000589634 EVA1CP58658 441 aa26.96■■□□□ 1.91
SMAD7-207ENST00000589634 A0A1W2PP64 1363 aa26.96■■□□□ 1.91
SMAD7-207ENST00000589634 EDC4Q6P2E9 1401 aaKnown RBP26.95■■□□□ 1.9
SMAD7-207ENST00000589634 POLR3GLQ9BT43 218 aa26.94■■□□□ 1.9
SMAD7-207ENST00000589634 CPDO75976 1380 aa26.94■■□□□ 1.9
SMAD7-207ENST00000589634 CD163L1Q9NR16 1453 aa26.93■■□□□ 1.9
SMAD7-207ENST00000589634 COL14A1Q05707 1796 aaKnown RBP26.92■■□□□ 1.9
SMAD7-207ENST00000589634 SOX12O15370 315 aa26.92■■□□□ 1.9
SMAD7-207ENST00000589634 STRN4Q9NRL3 753 aa26.92■■□□□ 1.9
SMAD7-207ENST00000589634 NME9Q86XW9 330 aa26.91■■□□□ 1.9
SMAD7-207ENST00000589634 ANKRD36BQ8N2N9 1353 aa26.91■■□□□ 1.9
SMAD7-207ENST00000589634 AKAP12Q02952 1782 aa26.9■■□□□ 1.9
SMAD7-207ENST00000589634 PHRF1Q9P1Y6 1649 aaKnown RBP26.9■■□□□ 1.9
SMAD7-207ENST00000589634 RGS12O14924 1447 aa26.9■■□□□ 1.9
SMAD7-207ENST00000589634 A0A0G2JS52 829 aa26.89■■□□□ 1.9
SMAD7-207ENST00000589634 MYT1Q01538 1121 aa26.89■■□□□ 1.9
SMAD7-207ENST00000589634 NWD2Q9ULI1 1742 aa26.88■■□□□ 1.89
SMAD7-207ENST00000589634 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.87■■□□□ 1.89
SMAD7-207ENST00000589634 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
SMAD7-207ENST00000589634 USP31Q70CQ4 1352 aa26.87■■□□□ 1.89
SMAD7-207ENST00000589634 PLCH1Q4KWH8 1693 aa26.87■■□□□ 1.89
SMAD7-207ENST00000589634 NRKQ7Z2Y5 1582 aa26.87■■□□□ 1.89
SMAD7-207ENST00000589634 ZRANB1Q9UGI0 708 aa26.86■■□□□ 1.89
SMAD7-207ENST00000589634 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
SMAD7-207ENST00000589634 COG3Q96JB2 828 aa26.85■■□□□ 1.89
SMAD7-207ENST00000589634 SLIT3O75094 1523 aa26.85■■□□□ 1.89
SMAD7-207ENST00000589634 MON2Q7Z3U7 1717 aa26.85■■□□□ 1.89
SMAD7-207ENST00000589634 SPATA31A5Q5VU36 1347 aa26.84■■□□□ 1.89
SMAD7-207ENST00000589634 SPATA31A7Q8IWB4 1347 aa26.84■■□□□ 1.89
SMAD7-207ENST00000589634 AATKQ6ZMQ8 1374 aa26.84■■□□□ 1.89
SMAD7-207ENST00000589634 ARHGEF25Q86VW2 580 aa26.83■■□□□ 1.89
SMAD7-207ENST00000589634 SEPT12Q8IYM1 358 aa26.83■■□□□ 1.89
SMAD7-207ENST00000589634 FAM98CQ17RN3 349 aaKnown RBP26.82■■□□□ 1.88
SMAD7-207ENST00000589634 ONECUT3O60422 494 aaPredicted RBP26.81■■□□□ 1.88
SMAD7-207ENST00000589634 USP35Q9P2H5 1018 aa26.8■■□□□ 1.88
SMAD7-207ENST00000589634 SPATA31A1Q5TZJ5 1347 aa26.79■■□□□ 1.88
SMAD7-207ENST00000589634 LARP1Q6PKG0 1096 aaKnown RBP26.78■■□□□ 1.88
SMAD7-207ENST00000589634 GLI3P10071 1580 aa26.78■■□□□ 1.88
SMAD7-207ENST00000589634 CSB-PGBD3P0DP91 1061 aa26.77■■□□□ 1.88
SMAD7-207ENST00000589634 CAMTA1Q9Y6Y1 1673 aa26.76■■□□□ 1.87
SMAD7-207ENST00000589634 FYB1O15117 783 aa26.75■■□□□ 1.87
SMAD7-207ENST00000589634 TOM1L2Q6ZVM7 507 aa26.75■■□□□ 1.87
SMAD7-207ENST00000589634 UPF1Q92900 1129 aaKnown RBP eCLIP26.75■■□□□ 1.87
SMAD7-207ENST00000589634 NRAPQ86VF7 1730 aa26.75■■□□□ 1.87
SMAD7-207ENST00000589634 TCP11L2Q8N4U5 519 aa26.74■■□□□ 1.87
SMAD7-207ENST00000589634 GGNBP2Q9H3C7 697 aa26.74■■□□□ 1.87
SMAD7-207ENST00000589634 KRT27Q7Z3Y8 459 aa26.73■■□□□ 1.87
SMAD7-207ENST00000589634 AXIN2Q9Y2T1 843 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms