RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SLC12A5Q9H2X9 1139 aa29.46■■■□□ 2.31
R3HDM4-204ENST00000589428 ALS2Q96Q42 1657 aa29.46■■■□□ 2.31
R3HDM4-204ENST00000589428 CPSF1Q10570 1443 aaKnown RBP29.46■■■□□ 2.31
R3HDM4-204ENST00000589428 MED1Q15648 1581 aaPredicted RBP29.45■■■□□ 2.31
R3HDM4-204ENST00000589428 HDGFL2Q7Z4V5 671 aaPredicted RBP29.45■■■□□ 2.3
R3HDM4-204ENST00000589428 TERF2IPQ9NYB0 399 aa29.45■■■□□ 2.3
R3HDM4-204ENST00000589428 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
R3HDM4-204ENST00000589428 POLR3GLQ9BT43 218 aa29.43■■■□□ 2.3
R3HDM4-204ENST00000589428 CD163L1Q9NR16 1453 aa29.43■■■□□ 2.3
R3HDM4-204ENST00000589428 NUTM2BA6NNL0 878 aaPredicted RBP29.42■■■□□ 2.3
R3HDM4-204ENST00000589428 NUTM2EB1AL46 878 aaPredicted RBP29.42■■■□□ 2.3
R3HDM4-204ENST00000589428 NUTM2AQ8IVF1 878 aaPredicted RBP29.42■■■□□ 2.3
R3HDM4-204ENST00000589428 MON2Q7Z3U7 1717 aa29.42■■■□□ 2.3
R3HDM4-204ENST00000589428 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
R3HDM4-204ENST00000589428 LRP6O75581 1613 aa29.41■■■□□ 2.3
R3HDM4-204ENST00000589428 MYOM1P52179 1685 aa29.4■■■□□ 2.3
R3HDM4-204ENST00000589428 NRKQ7Z2Y5 1582 aa29.4■■■□□ 2.3
R3HDM4-204ENST00000589428 SSH2Q76I76 1423 aa29.38■■■□□ 2.29
R3HDM4-204ENST00000589428 ANKRD36BQ8N2N9 1353 aa29.38■■■□□ 2.29
R3HDM4-204ENST00000589428 MEX3CQ5U5Q3 659 aaKnown RBP29.37■■■□□ 2.29
R3HDM4-204ENST00000589428 ABTB2Q8N961 1025 aa29.37■■■□□ 2.29
R3HDM4-204ENST00000589428 PLEKHG5O94827 1062 aa29.36■■■□□ 2.29
R3HDM4-204ENST00000589428 HAP1P54257 671 aaPredicted RBP29.36■■■□□ 2.29
R3HDM4-204ENST00000589428 TTC21BQ7Z4L5 1316 aa29.35■■■□□ 2.29
R3HDM4-204ENST00000589428 DDX10Q13206 875 aaKnown RBP29.35■■■□□ 2.29
R3HDM4-204ENST00000589428 EDC4Q6P2E9 1401 aaKnown RBP29.35■■■□□ 2.29
R3HDM4-204ENST00000589428 TTC21AQ8NDW8 1320 aa29.35■■■□□ 2.29
R3HDM4-204ENST00000589428 ABCA3Q99758 1704 aa29.34■■■□□ 2.29
R3HDM4-204ENST00000589428 NUTM2GQ5VZR2 741 aa29.32■■■□□ 2.28
R3HDM4-204ENST00000589428 CABLES1Q8TDN4 633 aa29.31■■■□□ 2.28
R3HDM4-204ENST00000589428 PIK3C2AO00443 1686 aa29.31■■■□□ 2.28
R3HDM4-204ENST00000589428 ADAMTS2O95450 1211 aa29.31■■■□□ 2.28
R3HDM4-204ENST00000589428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.3■■■□□ 2.28
R3HDM4-204ENST00000589428 PHF23Q9BUL5 403 aaPredicted RBP29.3■■■□□ 2.28
R3HDM4-204ENST00000589428 CRYBG1Q9Y4K1 1723 aa29.29■■■□□ 2.28
R3HDM4-204ENST00000589428 NLRP13Q86W25 1043 aa29.29■■■□□ 2.28
R3HDM4-204ENST00000589428 DIEXFQ68CQ4 756 aaKnown RBP29.28■■■□□ 2.28
R3HDM4-204ENST00000589428 PHRF1Q9P1Y6 1649 aaKnown RBP29.28■■■□□ 2.28
R3HDM4-204ENST00000589428 NLRP6P59044 892 aa29.27■■■□□ 2.28
R3HDM4-204ENST00000589428 MARF1Q9Y4F3 1742 aaKnown RBP29.26■■■□□ 2.27
R3HDM4-204ENST00000589428 C8orf37Q96NL8 207 aa29.25■■■□□ 2.27
R3HDM4-204ENST00000589428 USP19O94966 1318 aa29.25■■■□□ 2.27
R3HDM4-204ENST00000589428 NME9Q86XW9 330 aa29.22■■■□□ 2.27
R3HDM4-204ENST00000589428 NSD3Q9BZ95 1437 aa29.21■■■□□ 2.27
R3HDM4-204ENST00000589428 SLIT3O75094 1523 aa29.2■■■□□ 2.26
R3HDM4-204ENST00000589428 NGLY1Q96IV0 654 aa29.2■■■□□ 2.26
R3HDM4-204ENST00000589428 USP31Q70CQ4 1352 aa29.19■■■□□ 2.26
R3HDM4-204ENST00000589428 USP54Q70EL1 1684 aa29.19■■■□□ 2.26
R3HDM4-204ENST00000589428 AFF2P51816 1311 aa29.17■■■□□ 2.26
R3HDM4-204ENST00000589428 CARD14Q9BXL6 1004 aa29.17■■■□□ 2.26
R3HDM4-204ENST00000589428 PANK3Q9H999 370 aa29.17■■■□□ 2.26
R3HDM4-204ENST00000589428 GCP02774 474 aa29.16■■■□□ 2.26
R3HDM4-204ENST00000589428 ZRANB1Q9UGI0 708 aa29.15■■■□□ 2.26
R3HDM4-204ENST00000589428 KIF20BQ96Q89 1820 aa29.15■■■□□ 2.26
R3HDM4-204ENST00000589428 OVOS2A0A0J9YW53 1432 aa29.14■■■□□ 2.26
R3HDM4-204ENST00000589428 OVOS2Q6IE36 1432 aa29.14■■■□□ 2.26
R3HDM4-204ENST00000589428 PRDM11Q9NQV5 511 aa29.14■■■□□ 2.26
R3HDM4-204ENST00000589428 KCNH5Q8NCM2 988 aa29.14■■■□□ 2.25
R3HDM4-204ENST00000589428 KIAA0232Q92628 1395 aa29.14■■■□□ 2.25
R3HDM4-204ENST00000589428 COG3Q96JB2 828 aa29.13■■■□□ 2.25
R3HDM4-204ENST00000589428 ZC3H6P61129 1189 aaKnown RBP29.12■■■□□ 2.25
R3HDM4-204ENST00000589428 ZNF772Q68DY9 489 aaPredicted RBP29.12■■■□□ 2.25
R3HDM4-204ENST00000589428 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
R3HDM4-204ENST00000589428 CGNL1Q0VF96 1302 aa29.12■■■□□ 2.25
R3HDM4-204ENST00000589428 PLCH1Q4KWH8 1693 aa29.11■■■□□ 2.25
R3HDM4-204ENST00000589428 CPDO75976 1380 aa29.11■■■□□ 2.25
R3HDM4-204ENST00000589428 SOX12O15370 315 aa29.11■■■□□ 2.25
R3HDM4-204ENST00000589428 FNBP4Q8N3X1 1017 aaPredicted RBP29.11■■■□□ 2.25
R3HDM4-204ENST00000589428 FYB1O15117 783 aa29.1■■■□□ 2.25
R3HDM4-204ENST00000589428 SLIT2O94813 1529 aa29.09■■■□□ 2.25
R3HDM4-204ENST00000589428 GGNBP2Q9H3C7 697 aa29.09■■■□□ 2.25
R3HDM4-204ENST00000589428 RGS17Q9UGC6 210 aaPredicted RBP29.09■■■□□ 2.25
R3HDM4-204ENST00000589428 USP21Q9UK80 565 aa29.09■■■□□ 2.25
R3HDM4-204ENST00000589428 NFAT5O94916 1531 aa29.08■■■□□ 2.25
R3HDM4-204ENST00000589428 FAM83GA6ND36 823 aa29.08■■■□□ 2.25
R3HDM4-204ENST00000589428 NWD2Q9ULI1 1742 aa29.07■■■□□ 2.24
R3HDM4-204ENST00000589428 ZBTB7CA1YPR0 619 aa29.06■■■□□ 2.24
R3HDM4-204ENST00000589428 KNSTRNQ9Y448 316 aa29.06■■■□□ 2.24
R3HDM4-204ENST00000589428 CHRNA2Q15822 529 aa29.05■■■□□ 2.24
R3HDM4-204ENST00000589428 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.04■■■□□ 2.24
R3HDM4-204ENST00000589428 BCL9LQ86UU0 1499 aa29.04■■■□□ 2.24
R3HDM4-204ENST00000589428 BTG4Q9NY30 223 aa29.03■■■□□ 2.24
R3HDM4-204ENST00000589428 PER1O15534 1290 aaPredicted RBP29.03■■■□□ 2.24
R3HDM4-204ENST00000589428 UNC5CLQ8IV45 518 aa29.02■■■□□ 2.24
R3HDM4-204ENST00000589428 NSD2O96028 1365 aa29.01■■■□□ 2.23
R3HDM4-204ENST00000589428 ARHGEF25Q86VW2 580 aa29■■■□□ 2.23
R3HDM4-204ENST00000589428 NRAPQ86VF7 1730 aa29■■■□□ 2.23
R3HDM4-204ENST00000589428 ANKRD26Q9UPS8 1709 aa29■■■□□ 2.23
R3HDM4-204ENST00000589428 LMO7Q8WWI1 1683 aa29■■■□□ 2.23
R3HDM4-204ENST00000589428 POTEAQ6S8J7 498 aa29■■■□□ 2.23
R3HDM4-204ENST00000589428 TRPC5Q9UL62 973 aaPredicted RBP29■■■□□ 2.23
R3HDM4-204ENST00000589428 AATKQ6ZMQ8 1374 aa28.99■■■□□ 2.23
R3HDM4-204ENST00000589428 QTRT2Q9H974 415 aaKnown RBP28.98■■■□□ 2.23
R3HDM4-204ENST00000589428 LTN1O94822 1766 aa28.98■■■□□ 2.23
R3HDM4-204ENST00000589428 ATRNO75882 1429 aa28.97■■■□□ 2.23
R3HDM4-204ENST00000589428 ABCC6O95255 1503 aa28.96■■■□□ 2.23
R3HDM4-204ENST00000589428 CAMTA1Q9Y6Y1 1673 aa28.95■■■□□ 2.22
R3HDM4-204ENST00000589428 MIER1Q8N108 512 aa28.94■■■□□ 2.22
R3HDM4-204ENST00000589428 COL18A1P39060 1754 aa28.94■■■□□ 2.22
R3HDM4-204ENST00000589428 AMER1Q5JTC6 1135 aaPredicted RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms