RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
SMAD4-207ENST00000589076 BEGAINQ9BUH8 593 aa8.41□□□□□ -1.06
SMAD4-207ENST00000589076 MPNDQ8N594 471 aa8.4□□□□□ -1.06
SMAD4-207ENST00000589076 ZMYND10O75800 440 aa8.39□□□□□ -1.07
SMAD4-207ENST00000589076 NNTQ13423 1086 aa8.38□□□□□ -1.07
SMAD4-207ENST00000589076 TRIM46Q7Z4K8 759 aa8.38□□□□□ -1.07
SMAD4-207ENST00000589076 TLL2Q9Y6L7 1015 aa8.38□□□□□ -1.07
SMAD4-207ENST00000589076 ADH1CP00326 375 aa8.37□□□□□ -1.07
SMAD4-207ENST00000589076 AGERQ15109 404 aa8.37□□□□□ -1.07
SMAD4-207ENST00000589076 TBC1D2Q9BYX2 928 aa8.37□□□□□ -1.07
SMAD4-207ENST00000589076 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
SMAD4-207ENST00000589076 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-207ENST00000589076 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
SMAD4-207ENST00000589076 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
SMAD4-207ENST00000589076 WDR4P57081 412 aaKnown RBP8.35□□□□□ -1.07
SMAD4-207ENST00000589076 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
SMAD4-207ENST00000589076 MRPL14Q6P1L8 145 aaKnown RBP8.35□□□□□ -1.07
SMAD4-207ENST00000589076 ZC3H15Q8WU90 426 aaKnown RBP8.35□□□□□ -1.07
SMAD4-207ENST00000589076 UPP2O95045 317 aa8.34□□□□□ -1.07
SMAD4-207ENST00000589076 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
SMAD4-207ENST00000589076 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
SMAD4-207ENST00000589076 H3BM21 787 aa8.33□□□□□ -1.08
SMAD4-207ENST00000589076 GMPRP36959 345 aa8.33□□□□□ -1.08
SMAD4-207ENST00000589076 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-207ENST00000589076 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
SMAD4-207ENST00000589076 SPTLC1O15269 473 aa8.32□□□□□ -1.08
SMAD4-207ENST00000589076 NR5A1Q13285 461 aa8.32□□□□□ -1.08
SMAD4-207ENST00000589076 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
SMAD4-207ENST00000589076 PURBQ96QR8 312 aaKnown RBP8.32□□□□□ -1.08
SMAD4-207ENST00000589076 NUTM2BA6NNL0 878 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-207ENST00000589076 NUTM2EB1AL46 878 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-207ENST00000589076 HRCP23327 699 aa8.31□□□□□ -1.08
SMAD4-207ENST00000589076 VEGFBP49765 207 aa8.31□□□□□ -1.08
SMAD4-207ENST00000589076 NUTM2DQ5VT03 806 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-207ENST00000589076 NUTM2AQ8IVF1 878 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-207ENST00000589076 TSC1Q92574 1164 aa8.31□□□□□ -1.08
SMAD4-207ENST00000589076 AK7Q96M32 723 aa8.31□□□□□ -1.08
SMAD4-207ENST00000589076 TIMP2P16035 220 aa8.3□□□□□ -1.08
SMAD4-207ENST00000589076 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
SMAD4-207ENST00000589076 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
SMAD4-207ENST00000589076 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
SMAD4-207ENST00000589076 CFAP99D6REC4 459 aa8.29□□□□□ -1.08
SMAD4-207ENST00000589076 MAN1A2O60476 641 aa8.29□□□□□ -1.08
SMAD4-207ENST00000589076 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-207ENST00000589076 CSPP1Q1MSJ5 1256 aa8.29□□□□□ -1.08
SMAD4-207ENST00000589076 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
SMAD4-207ENST00000589076 NBPF14Q5TI25 921 aa8.28□□□□□ -1.08
SMAD4-207ENST00000589076 HELBQ8NG08 1087 aaPredicted RBP8.28□□□□□ -1.08
SMAD4-207ENST00000589076 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
SMAD4-207ENST00000589076 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
SMAD4-207ENST00000589076 TRIM66O15016 1216 aa8.27□□□□□ -1.09
SMAD4-207ENST00000589076 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
SMAD4-207ENST00000589076 BMP2P12643 396 aa8.26□□□□□ -1.09
SMAD4-207ENST00000589076 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
SMAD4-207ENST00000589076 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
SMAD4-207ENST00000589076 ITPKCQ96DU7 683 aa8.24□□□□□ -1.09
SMAD4-207ENST00000589076 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
SMAD4-207ENST00000589076 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
SMAD4-207ENST00000589076 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
SMAD4-207ENST00000589076 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-207ENST00000589076 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
SMAD4-207ENST00000589076 ZFAND3Q9H8U3 227 aa8.23□□□□□ -1.09
SMAD4-207ENST00000589076 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
SMAD4-207ENST00000589076 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
SMAD4-207ENST00000589076 MAGEB6P1A0A0J9YX57 407 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 SOBPA7XYQ1 873 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 PER1O15534 1290 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-207ENST00000589076 FSHRP23945 695 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 GRM5P41594 1212 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 MYSM1Q5VVJ2 828 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 GPKOWQ92917 476 aaPredicted RBP eCLIP8.21□□□□□ -1.1
SMAD4-207ENST00000589076 TSEN34Q9BSV6 310 aaKnown RBP8.21□□□□□ -1.1
SMAD4-207ENST00000589076 MAP4K5Q9Y4K4 846 aa8.21□□□□□ -1.1
SMAD4-207ENST00000589076 NR3C2P08235 984 aa8.2□□□□□ -1.1
SMAD4-207ENST00000589076 VSIG8P0DPA2 414 aa8.2□□□□□ -1.1
SMAD4-207ENST00000589076 PDE4DQ08499 809 aa8.2□□□□□ -1.1
SMAD4-207ENST00000589076 LILRB3O75022 631 aa8.19□□□□□ -1.1
SMAD4-207ENST00000589076 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SMAD4-207ENST00000589076 MEIOBQ8N635 442 aa8.19□□□□□ -1.1
SMAD4-207ENST00000589076 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
SMAD4-207ENST00000589076 CLK2P49760 499 aaKnown RBP8.18□□□□□ -1.1
SMAD4-207ENST00000589076 QPCTQ16769 361 aa8.18□□□□□ -1.1
SMAD4-207ENST00000589076 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.1
SMAD4-207ENST00000589076 TRMT44Q8IYL2 757 aaKnown RBP8.18□□□□□ -1.1
SMAD4-207ENST00000589076 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
SMAD4-207ENST00000589076 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
SMAD4-207ENST00000589076 C1QTNF2Q9BXJ5 285 aa8.17□□□□□ -1.1
SMAD4-207ENST00000589076 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
SMAD4-207ENST00000589076 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
SMAD4-207ENST00000589076 PPFIA3O75145 1194 aa8.16□□□□□ -1.1
SMAD4-207ENST00000589076 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
SMAD4-207ENST00000589076 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-207ENST00000589076 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-207ENST00000589076 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
SMAD4-207ENST00000589076 SH3BP5LQ7L8J4 393 aa8.15□□□□□ -1.1
SMAD4-207ENST00000589076 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
SMAD4-207ENST00000589076 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-207ENST00000589076 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
SMAD4-207ENST00000589076 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-207ENST00000589076 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms