RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 COG3Q96JB2 828 aa14.22□□□□□ -0.13
NEDD4L-224ENST00000588712 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
NEDD4L-224ENST00000588712 C1orf167Q5SNV9 1468 aa14.21□□□□□ -0.13
NEDD4L-224ENST00000588712 ANKRD26Q9UPS8 1709 aa14.21□□□□□ -0.13
NEDD4L-224ENST00000588712 PSME1Q06323 249 aa14.21□□□□□ -0.14
NEDD4L-224ENST00000588712 GGNBP2Q9H3C7 697 aa14.21□□□□□ -0.14
NEDD4L-224ENST00000588712 SSH2Q76I76 1423 aa14.2□□□□□ -0.14
NEDD4L-224ENST00000588712 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
NEDD4L-224ENST00000588712 CFAP53Q96M91 514 aa14.19□□□□□ -0.14
NEDD4L-224ENST00000588712 MST1RQ04912 1400 aa14.19□□□□□ -0.14
NEDD4L-224ENST00000588712 PNISRQ8TF01 805 aaKnown RBP14.19□□□□□ -0.14
NEDD4L-224ENST00000588712 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
NEDD4L-224ENST00000588712 CCDC184Q52MB2 194 aa14.18□□□□□ -0.14
NEDD4L-224ENST00000588712 XIRP1Q702N8 1843 aaKnown RBP14.17□□□□□ -0.14
NEDD4L-224ENST00000588712 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
NEDD4L-224ENST00000588712 NME9Q86XW9 330 aa14.17□□□□□ -0.14
NEDD4L-224ENST00000588712 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
NEDD4L-224ENST00000588712 INSRP06213 1382 aa14.16□□□□□ -0.14
NEDD4L-224ENST00000588712 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
NEDD4L-224ENST00000588712 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
NEDD4L-224ENST00000588712 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
NEDD4L-224ENST00000588712 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
NEDD4L-224ENST00000588712 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.14
NEDD4L-224ENST00000588712 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
NEDD4L-224ENST00000588712 FOXO3O43524 673 aa14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 MTHFSP49914 203 aa14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 ABTB2Q8N961 1025 aa14.14□□□□□ -0.15
NEDD4L-224ENST00000588712 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
NEDD4L-224ENST00000588712 NLRP6P59044 892 aa14.13□□□□□ -0.15
NEDD4L-224ENST00000588712 OVOS2A0A0J9YW53 1432 aa14.12□□□□□ -0.15
NEDD4L-224ENST00000588712 OVOS2Q6IE36 1432 aa14.12□□□□□ -0.15
NEDD4L-224ENST00000588712 LTBP4Q8N2S1 1624 aa14.12□□□□□ -0.15
NEDD4L-224ENST00000588712 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
NEDD4L-224ENST00000588712 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
NEDD4L-224ENST00000588712 SBNO1A3KN83 1393 aa14.11□□□□□ -0.15
NEDD4L-224ENST00000588712 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
NEDD4L-224ENST00000588712 BRINP3Q76B58 766 aa14.1□□□□□ -0.15
NEDD4L-224ENST00000588712 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
NEDD4L-224ENST00000588712 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
NEDD4L-224ENST00000588712 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
NEDD4L-224ENST00000588712 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
NEDD4L-224ENST00000588712 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.15
NEDD4L-224ENST00000588712 PIK3C2AO00443 1686 aa14.08□□□□□ -0.16
NEDD4L-224ENST00000588712 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-224ENST00000588712 MAP2P11137 1827 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-224ENST00000588712 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-224ENST00000588712 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
NEDD4L-224ENST00000588712 ADAMTS8Q9UP79 889 aa14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 ARHGEF10O15013 1369 aa14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 PPM1GO15355 546 aaPredicted RBP14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 TOM1O60784 492 aa14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
NEDD4L-224ENST00000588712 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
NEDD4L-224ENST00000588712 IQSEC2Q5JU85 1478 aa14.05□□□□□ -0.16
NEDD4L-224ENST00000588712 SOS2Q07890 1332 aaPredicted RBP14.04□□□□□ -0.16
NEDD4L-224ENST00000588712 XPCQ01831 940 aaPredicted RBP14.04□□□□□ -0.16
NEDD4L-224ENST00000588712 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
NEDD4L-224ENST00000588712 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
NEDD4L-224ENST00000588712 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 PXDNQ92626 1479 aa14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 SPATA31A3Q5VYP0 1347 aa14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 BLMP54132 1417 aaPredicted RBP14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 AMPHP49418 695 aa14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
NEDD4L-224ENST00000588712 USP19O94966 1318 aa14.02□□□□□ -0.16
NEDD4L-224ENST00000588712 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.16
NEDD4L-224ENST00000588712 FLT4P35916 1363 aa14.02□□□□□ -0.16
NEDD4L-224ENST00000588712 COL3A1P02461 1466 aaPredicted RBP14.02□□□□□ -0.17
NEDD4L-224ENST00000588712 RTL1A6NKG5 1358 aa14.02□□□□□ -0.17
NEDD4L-224ENST00000588712 U2AF1L5P0DN76 240 aaPredicted RBP14.02□□□□□ -0.17
NEDD4L-224ENST00000588712 U2AF1Q01081 240 aaKnown RBP eCLIP14.02□□□□□ -0.17
NEDD4L-224ENST00000588712 MAP3K19Q56UN5 1328 aa14.01□□□□□ -0.17
NEDD4L-224ENST00000588712 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
NEDD4L-224ENST00000588712 GCP02774 474 aa14.01□□□□□ -0.17
NEDD4L-224ENST00000588712 SLIT3O75094 1523 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 NEFMP07197 916 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 FBLN1P23142 703 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
NEDD4L-224ENST00000588712 SOX12O15370 315 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 FCHSD2O94868 740 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
NEDD4L-224ENST00000588712 RUNDC1Q96C34 613 aa14□□□□□ -0.17
NEDD4L-224ENST00000588712 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 MARF1Q9Y4F3 1742 aaKnown RBP13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 IL13P35225 146 aa13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 NHSL1Q5SYE7 1610 aa13.99□□□□□ -0.17
NEDD4L-224ENST00000588712 IP6K1Q92551 441 aa13.98□□□□□ -0.17
NEDD4L-224ENST00000588712 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
NEDD4L-224ENST00000588712 NFAT5O94916 1531 aa13.97□□□□□ -0.17
NEDD4L-224ENST00000588712 HOXC9P31274 260 aa13.97□□□□□ -0.17
NEDD4L-224ENST00000588712 ARHGEF25Q86VW2 580 aa13.97□□□□□ -0.17
NEDD4L-224ENST00000588712 ROBO1Q9Y6N7 1651 aa13.96□□□□□ -0.17
NEDD4L-224ENST00000588712 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms