RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 PHRF1Q9P1Y6 1649 aaKnown RBP22.13■■□□□ 1.13
PRKCSH-204ENST00000587290 NUDT16Q96DE0 195 aaKnown RBP22.13■■□□□ 1.13
PRKCSH-204ENST00000587290 STAC3Q96MF2 364 aa22.13■■□□□ 1.13
PRKCSH-204ENST00000587290 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
PRKCSH-204ENST00000587290 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
PRKCSH-204ENST00000587290 A0A0G2JS52 829 aa22.1■■□□□ 1.13
PRKCSH-204ENST00000587290 MYT1Q01538 1121 aa22.1■■□□□ 1.13
PRKCSH-204ENST00000587290 CDK19Q9BWU1 502 aa22.1■■□□□ 1.13
PRKCSH-204ENST00000587290 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
PRKCSH-204ENST00000587290 DEFB132Q7Z7B7 95 aa22.09■■□□□ 1.13
PRKCSH-204ENST00000587290 FAM98CQ17RN3 349 aaKnown RBP22.08■■□□□ 1.13
PRKCSH-204ENST00000587290 NUTM2GQ5VZR2 741 aa22.08■■□□□ 1.13
PRKCSH-204ENST00000587290 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
PRKCSH-204ENST00000587290 CCDC125Q86Z20 511 aa22.06■■□□□ 1.12
PRKCSH-204ENST00000587290 KIAA0232Q92628 1395 aa22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 PRDM11Q9NQV5 511 aa22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 ZRANB1Q9UGI0 708 aa22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 ACEP12821 1306 aa22.05■■□□□ 1.12
PRKCSH-204ENST00000587290 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
PRKCSH-204ENST00000587290 POLR3AO14802 1390 aaPredicted RBP22.03■■□□□ 1.12
PRKCSH-204ENST00000587290 FAM182BQ5T319 152 aa22.03■■□□□ 1.12
PRKCSH-204ENST00000587290 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
PRKCSH-204ENST00000587290 NRKQ7Z2Y5 1582 aa22.03■■□□□ 1.12
PRKCSH-204ENST00000587290 ZC3H6P61129 1189 aaKnown RBP22.01■■□□□ 1.11
PRKCSH-204ENST00000587290 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
PRKCSH-204ENST00000587290 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
PRKCSH-204ENST00000587290 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
PRKCSH-204ENST00000587290 CCDC61Q9Y6R9 512 aa22■■□□□ 1.11
PRKCSH-204ENST00000587290 TRPM1Q7Z4N2 1603 aa21.99■■□□□ 1.11
PRKCSH-204ENST00000587290 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
PRKCSH-204ENST00000587290 CENPJQ9HC77 1338 aaPredicted RBP21.99■■□□□ 1.11
PRKCSH-204ENST00000587290 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 SRPK2P78362 688 aaKnown RBP21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 SF3B2Q13435 895 aaKnown RBP21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 L3MBTL2Q969R5 705 aa21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
PRKCSH-204ENST00000587290 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
PRKCSH-204ENST00000587290 PLEKHG3A1L390 1219 aa21.96■■□□□ 1.11
PRKCSH-204ENST00000587290 TNS1Q9HBL0 1735 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-204ENST00000587290 LMO7Q8WWI1 1683 aa21.95■■□□□ 1.1
PRKCSH-204ENST00000587290 ABTB2Q8N961 1025 aa21.94■■□□□ 1.1
PRKCSH-204ENST00000587290 CAMTA1Q9Y6Y1 1673 aa21.94■■□□□ 1.1
PRKCSH-204ENST00000587290 SPATA31A1Q5TZJ5 1347 aa21.93■■□□□ 1.1
PRKCSH-204ENST00000587290 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
PRKCSH-204ENST00000587290 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
PRKCSH-204ENST00000587290 SSH2Q76I76 1423 aa21.91■■□□□ 1.1
PRKCSH-204ENST00000587290 USP19O94966 1318 aa21.91■■□□□ 1.1
PRKCSH-204ENST00000587290 PIK3C2AO00443 1686 aa21.89■■□□□ 1.1
PRKCSH-204ENST00000587290 PSDA5PKW4 1024 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 BAG6P46379 1132 aa21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 EN1Q05925 392 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 LARP1Q6PKG0 1096 aaKnown RBP21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 CABP1Q9NZU7 370 aa21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 USP6P35125 1406 aa21.88■■□□□ 1.09
PRKCSH-204ENST00000587290 ZBTB7CA1YPR0 619 aa21.86■■□□□ 1.09
PRKCSH-204ENST00000587290 EVA1CP58658 441 aa21.86■■□□□ 1.09
PRKCSH-204ENST00000587290 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
PRKCSH-204ENST00000587290 ROCK2O75116 1388 aaKnown RBP21.86■■□□□ 1.09
PRKCSH-204ENST00000587290 CPDO75976 1380 aa21.86■■□□□ 1.09
PRKCSH-204ENST00000587290 GCP02774 474 aa21.85■■□□□ 1.09
PRKCSH-204ENST00000587290 NLRP13Q86W25 1043 aa21.84■■□□□ 1.09
PRKCSH-204ENST00000587290 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.09
PRKCSH-204ENST00000587290 SLIT3O75094 1523 aa21.83■■□□□ 1.09
PRKCSH-204ENST00000587290 RGPD5Q99666 1765 aa21.82■■□□□ 1.08
PRKCSH-204ENST00000587290 TRIM37O94972 964 aa21.82■■□□□ 1.08
PRKCSH-204ENST00000587290 LRP5O75197 1615 aa21.81■■□□□ 1.08
PRKCSH-204ENST00000587290 NLRP6P59044 892 aa21.81■■□□□ 1.08
PRKCSH-204ENST00000587290 COL18A1P39060 1754 aa21.81■■□□□ 1.08
PRKCSH-204ENST00000587290 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
PRKCSH-204ENST00000587290 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
PRKCSH-204ENST00000587290 EZH2Q15910 746 aaKnown RBP21.79■■□□□ 1.08
PRKCSH-204ENST00000587290 DISP2A7MBM2 1401 aa21.79■■□□□ 1.08
PRKCSH-204ENST00000587290 BARGINQ6ZT62 677 aa21.78■■□□□ 1.08
PRKCSH-204ENST00000587290 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
PRKCSH-204ENST00000587290 WNK3Q9BYP7 1800 aa21.78■■□□□ 1.08
PRKCSH-204ENST00000587290 BRD4O60885 1362 aaPredicted RBP21.77■■□□□ 1.08
PRKCSH-204ENST00000587290 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
PRKCSH-204ENST00000587290 LRRC37A3O60309 1634 aa21.77■■□□□ 1.07
PRKCSH-204ENST00000587290 RREB1Q92766 1687 aa21.76■■□□□ 1.07
PRKCSH-204ENST00000587290 SOX12O15370 315 aa21.76■■□□□ 1.07
PRKCSH-204ENST00000587290 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
PRKCSH-204ENST00000587290 R3HDM1Q15032 1099 aaKnown RBP21.76■■□□□ 1.07
PRKCSH-204ENST00000587290 MON2Q7Z3U7 1717 aa21.76■■□□□ 1.07
PRKCSH-204ENST00000587290 NUP188Q5SRE5 1749 aa21.75■■□□□ 1.07
PRKCSH-204ENST00000587290 CRB1P82279 1406 aa21.75■■□□□ 1.07
PRKCSH-204ENST00000587290 TTC21BQ7Z4L5 1316 aa21.74■■□□□ 1.07
PRKCSH-204ENST00000587290 AATKQ6ZMQ8 1374 aa21.74■■□□□ 1.07
PRKCSH-204ENST00000587290 PEAK1Q9H792 1746 aa21.73■■□□□ 1.07
PRKCSH-204ENST00000587290 APBA3O96018 575 aa21.73■■□□□ 1.07
PRKCSH-204ENST00000587290 CAMKK2Q96RR4 588 aa21.73■■□□□ 1.07
PRKCSH-204ENST00000587290 SBF2Q86WG5 1849 aa21.73■■□□□ 1.07
PRKCSH-204ENST00000587290 AXIN2Q9Y2T1 843 aa21.72■■□□□ 1.07
PRKCSH-204ENST00000587290 CPSF1Q10570 1443 aaKnown RBP21.72■■□□□ 1.07
PRKCSH-204ENST00000587290 NFAT5O94916 1531 aa21.7■■□□□ 1.07
PRKCSH-204ENST00000587290 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
PRKCSH-204ENST00000587290 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
PRKCSH-204ENST00000587290 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms