RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 ATAD2Q6PL18 1390 aa34.03■■■■□ 3.04
ERCC2-209ENST00000586856 CABP1Q9NZU7 370 aa34.03■■■■□ 3.04
ERCC2-209ENST00000586856 FNBP4Q8N3X1 1017 aaPredicted RBP34.01■■■■□ 3.03
ERCC2-209ENST00000586856 AKAP12Q02952 1782 aa34■■■■□ 3.03
ERCC2-209ENST00000586856 USP47Q96K76 1375 aa34■■■■□ 3.03
ERCC2-209ENST00000586856 PLCH1Q4KWH8 1693 aa33.99■■■■□ 3.03
ERCC2-209ENST00000586856 USP21Q9UK80 565 aa33.99■■■■□ 3.03
ERCC2-209ENST00000586856 PHRF1Q9P1Y6 1649 aaKnown RBP33.99■■■■□ 3.03
ERCC2-209ENST00000586856 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.99■■■■□ 3.03
ERCC2-209ENST00000586856 USP6P35125 1406 aa33.98■■■■□ 3.03
ERCC2-209ENST00000586856 ST20-MTHFSA0A0A6YYL1 179 aa33.97■■■■□ 3.03
ERCC2-209ENST00000586856 BCL9LQ86UU0 1499 aa33.96■■■■□ 3.03
ERCC2-209ENST00000586856 SLIT2O94813 1529 aa33.96■■■■□ 3.03
ERCC2-209ENST00000586856 TESK2Q96S53 571 aa33.95■■■■□ 3.03
ERCC2-209ENST00000586856 BRD4O60885 1362 aaPredicted RBP33.95■■■■□ 3.02
ERCC2-209ENST00000586856 NWD2Q9ULI1 1742 aa33.94■■■■□ 3.02
ERCC2-209ENST00000586856 RXRBP28702 533 aa33.94■■■■□ 3.02
ERCC2-209ENST00000586856 QTRT2Q9H974 415 aaKnown RBP33.94■■■■□ 3.02
ERCC2-209ENST00000586856 ATRNO75882 1429 aa33.94■■■■□ 3.02
ERCC2-209ENST00000586856 NRKQ7Z2Y5 1582 aa33.92■■■■□ 3.02
ERCC2-209ENST00000586856 MON2Q7Z3U7 1717 aa33.91■■■■□ 3.02
ERCC2-209ENST00000586856 CDK12Q9NYV4 1490 aaPredicted RBP33.91■■■■□ 3.02
ERCC2-209ENST00000586856 NUTM2GQ5VZR2 741 aa33.91■■■■□ 3.02
ERCC2-209ENST00000586856 TRPC5Q9UL62 973 aaPredicted RBP33.9■■■■□ 3.02
ERCC2-209ENST00000586856 COL14A1Q05707 1796 aaKnown RBP33.9■■■■□ 3.02
ERCC2-209ENST00000586856 SSH2Q76I76 1423 aa33.89■■■■□ 3.02
ERCC2-209ENST00000586856 CPSF1Q10570 1443 aaKnown RBP33.88■■■■□ 3.01
ERCC2-209ENST00000586856 PIK3C2AO00443 1686 aa33.88■■■■□ 3.01
ERCC2-209ENST00000586856 RBM6P78332 1123 aaKnown RBP33.88■■■■□ 3.01
ERCC2-209ENST00000586856 ABTB2Q8N961 1025 aa33.88■■■■□ 3.01
ERCC2-209ENST00000586856 NRAPQ86VF7 1730 aa33.86■■■■□ 3.01
ERCC2-209ENST00000586856 CD163L1Q9NR16 1453 aa33.85■■■■□ 3.01
ERCC2-209ENST00000586856 RGS12O14924 1447 aa33.85■■■■□ 3.01
ERCC2-209ENST00000586856 USP19O94966 1318 aa33.84■■■■□ 3.01
ERCC2-209ENST00000586856 UNC5CLQ8IV45 518 aa33.84■■■■□ 3.01
ERCC2-209ENST00000586856 PUS7Q96PZ0 661 aaKnown RBP33.84■■■■□ 3.01
ERCC2-209ENST00000586856 FAM83GA6ND36 823 aa33.83■■■■□ 3.01
ERCC2-209ENST00000586856 ZNF692Q9BU19 519 aaPredicted RBP33.83■■■■□ 3.01
ERCC2-209ENST00000586856 SLC24A1O60721 1099 aa33.82■■■■□ 3
ERCC2-209ENST00000586856 KTN1Q86UP2 1357 aaKnown RBP33.82■■■■□ 3
ERCC2-209ENST00000586856 TMC1Q8TDI8 760 aa33.81■■■■□ 3
ERCC2-209ENST00000586856 NLRP13Q86W25 1043 aa33.79■■■■□ 3
ERCC2-209ENST00000586856 KIAA0232Q92628 1395 aa33.79■■■■□ 3
ERCC2-209ENST00000586856 TTC21BQ7Z4L5 1316 aa33.79■■■■□ 3
ERCC2-209ENST00000586856 GLI3P10071 1580 aa33.78■■■■□ 3
ERCC2-209ENST00000586856 PRDM11Q9NQV5 511 aa33.78■■■■□ 3
ERCC2-209ENST00000586856 SLIT3O75094 1523 aa33.78■■■■□ 3
ERCC2-209ENST00000586856 NINLQ9Y2I6 1382 aa33.77■■■■□ 3
ERCC2-209ENST00000586856 TMF1P82094 1093 aa33.77■■■■□ 3
ERCC2-209ENST00000586856 SLC12A5Q9H2X9 1139 aa33.77■■■■□ 3
ERCC2-209ENST00000586856 TTC21AQ8NDW8 1320 aa33.76■■■□□ 2.99
ERCC2-209ENST00000586856 A0A1W2PP64 1363 aa33.74■■■□□ 2.99
ERCC2-209ENST00000586856 NLRP6P59044 892 aa33.74■■■□□ 2.99
ERCC2-209ENST00000586856 GJD4Q96KN9 370 aaPredicted RBP33.74■■■□□ 2.99
ERCC2-209ENST00000586856 ZC3H6P61129 1189 aaKnown RBP33.73■■■□□ 2.99
ERCC2-209ENST00000586856 BTG4Q9NY30 223 aa33.73■■■□□ 2.99
ERCC2-209ENST00000586856 HDGFL2Q7Z4V5 671 aaPredicted RBP33.72■■■□□ 2.99
ERCC2-209ENST00000586856 CPDO75976 1380 aa33.72■■■□□ 2.99
ERCC2-209ENST00000586856 VPS72Q15906 364 aa33.71■■■□□ 2.99
ERCC2-209ENST00000586856 TERF2IPQ9NYB0 399 aa33.71■■■□□ 2.99
ERCC2-209ENST00000586856 USP54Q70EL1 1684 aa33.71■■■□□ 2.99
ERCC2-209ENST00000586856 CHRNA2Q15822 529 aa33.7■■■□□ 2.99
ERCC2-209ENST00000586856 LMO7Q8WWI1 1683 aa33.7■■■□□ 2.99
ERCC2-209ENST00000586856 EDC4Q6P2E9 1401 aaKnown RBP33.7■■■□□ 2.98
ERCC2-209ENST00000586856 GCP02774 474 aa33.69■■■□□ 2.98
ERCC2-209ENST00000586856 MYOM1P52179 1685 aa33.66■■■□□ 2.98
ERCC2-209ENST00000586856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.66■■■□□ 2.98
ERCC2-209ENST00000586856 CDCA8Q53HL2 280 aa33.65■■■□□ 2.98
ERCC2-209ENST00000586856 CCDC9Q9Y3X0 531 aaKnown RBP33.65■■■□□ 2.98
ERCC2-209ENST00000586856 ANKRD36BQ8N2N9 1353 aa33.62■■■□□ 2.97
ERCC2-209ENST00000586856 CAMTA1Q9Y6Y1 1673 aa33.62■■■□□ 2.97
ERCC2-209ENST00000586856 EIF4G2P78344 907 aaKnown RBP eCLIP33.62■■■□□ 2.97
ERCC2-209ENST00000586856 NFAT5O94916 1531 aa33.62■■■□□ 2.97
ERCC2-209ENST00000586856 USP31Q70CQ4 1352 aa33.61■■■□□ 2.97
ERCC2-209ENST00000586856 NME9Q86XW9 330 aa33.61■■■□□ 2.97
ERCC2-209ENST00000586856 HSPA5P11021 654 aaKnown RBP33.59■■■□□ 2.97
ERCC2-209ENST00000586856 ZRANB1Q9UGI0 708 aa33.59■■■□□ 2.97
ERCC2-209ENST00000586856 BRWD3Q6RI45 1802 aa33.58■■■□□ 2.97
ERCC2-209ENST00000586856 COL18A1P39060 1754 aa33.57■■■□□ 2.97
ERCC2-209ENST00000586856 ZBTB7CA1YPR0 619 aa33.56■■■□□ 2.96
ERCC2-209ENST00000586856 KCNH5Q8NCM2 988 aa33.56■■■□□ 2.96
ERCC2-209ENST00000586856 STRN4Q9NRL3 753 aa33.56■■■□□ 2.96
ERCC2-209ENST00000586856 SPATA31A5Q5VU36 1347 aa33.55■■■□□ 2.96
ERCC2-209ENST00000586856 SPATA31A7Q8IWB4 1347 aa33.55■■■□□ 2.96
ERCC2-209ENST00000586856 SOX12O15370 315 aa33.55■■■□□ 2.96
ERCC2-209ENST00000586856 AATKQ6ZMQ8 1374 aa33.55■■■□□ 2.96
ERCC2-209ENST00000586856 OVOS2A0A0J9YW53 1432 aa33.54■■■□□ 2.96
ERCC2-209ENST00000586856 OVOS2Q6IE36 1432 aa33.54■■■□□ 2.96
ERCC2-209ENST00000586856 COL5A2P05997 1499 aaPredicted RBP33.54■■■□□ 2.96
ERCC2-209ENST00000586856 THSD7AQ9UPZ6 1657 aa33.51■■■□□ 2.95
ERCC2-209ENST00000586856 LTN1O94822 1766 aa33.5■■■□□ 2.95
ERCC2-209ENST00000586856 SEPT12Q8IYM1 358 aa33.5■■■□□ 2.95
ERCC2-209ENST00000586856 ONECUT3O60422 494 aaPredicted RBP33.49■■■□□ 2.95
ERCC2-209ENST00000586856 EVA1CP58658 441 aa33.49■■■□□ 2.95
ERCC2-209ENST00000586856 ARHGEF25Q86VW2 580 aa33.49■■■□□ 2.95
ERCC2-209ENST00000586856 RGPD5Q99666 1765 aa33.49■■■□□ 2.95
ERCC2-209ENST00000586856 SPATA31A1Q5TZJ5 1347 aa33.49■■■□□ 2.95
ERCC2-209ENST00000586856 KIF20BQ96Q89 1820 aa33.49■■■□□ 2.95
ERCC2-209ENST00000586856 ABCC6O95255 1503 aa33.48■■■□□ 2.95
ERCC2-209ENST00000586856 FAM98CQ17RN3 349 aaKnown RBP33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms