RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
ERCC2-207ENST00000586441 ACEP12821 1306 aa17.58■□□□□ 0.4
ERCC2-207ENST00000586441 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
ERCC2-207ENST00000586441 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
ERCC2-207ENST00000586441 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
ERCC2-207ENST00000586441 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
ERCC2-207ENST00000586441 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
ERCC2-207ENST00000586441 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
ERCC2-207ENST00000586441 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
ERCC2-207ENST00000586441 ABCA3Q99758 1704 aa17.55■□□□□ 0.4
ERCC2-207ENST00000586441 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
ERCC2-207ENST00000586441 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
ERCC2-207ENST00000586441 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
ERCC2-207ENST00000586441 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
ERCC2-207ENST00000586441 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
ERCC2-207ENST00000586441 FAM83GA6ND36 823 aa17.53■□□□□ 0.4
ERCC2-207ENST00000586441 PUS7Q96PZ0 661 aaKnown RBP17.53■□□□□ 0.4
ERCC2-207ENST00000586441 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
ERCC2-207ENST00000586441 VPS72Q15906 364 aa17.52■□□□□ 0.4
ERCC2-207ENST00000586441 RGS12O14924 1447 aa17.52■□□□□ 0.4
ERCC2-207ENST00000586441 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
ERCC2-207ENST00000586441 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
ERCC2-207ENST00000586441 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
ERCC2-207ENST00000586441 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
ERCC2-207ENST00000586441 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
ERCC2-207ENST00000586441 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERCC2-207ENST00000586441 COL14A1Q05707 1796 aaKnown RBP17.49■□□□□ 0.39
ERCC2-207ENST00000586441 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
ERCC2-207ENST00000586441 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
ERCC2-207ENST00000586441 USP6P35125 1406 aa17.47■□□□□ 0.39
ERCC2-207ENST00000586441 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
ERCC2-207ENST00000586441 USP19O94966 1318 aa17.47■□□□□ 0.39
ERCC2-207ENST00000586441 CPDO75976 1380 aa17.45■□□□□ 0.38
ERCC2-207ENST00000586441 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
ERCC2-207ENST00000586441 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
ERCC2-207ENST00000586441 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
ERCC2-207ENST00000586441 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
ERCC2-207ENST00000586441 GLI3P10071 1580 aa17.44■□□□□ 0.38
ERCC2-207ENST00000586441 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
ERCC2-207ENST00000586441 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
ERCC2-207ENST00000586441 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
ERCC2-207ENST00000586441 KIAA0232Q92628 1395 aa17.42■□□□□ 0.38
ERCC2-207ENST00000586441 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
ERCC2-207ENST00000586441 GCP02774 474 aa17.42■□□□□ 0.38
ERCC2-207ENST00000586441 TESK2Q96S53 571 aa17.41■□□□□ 0.38
ERCC2-207ENST00000586441 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
ERCC2-207ENST00000586441 NLRP6P59044 892 aa17.4■□□□□ 0.38
ERCC2-207ENST00000586441 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
ERCC2-207ENST00000586441 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
ERCC2-207ENST00000586441 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
ERCC2-207ENST00000586441 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
ERCC2-207ENST00000586441 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
ERCC2-207ENST00000586441 CCDC9Q9Y3X0 531 aaKnown RBP17.39■□□□□ 0.37
ERCC2-207ENST00000586441 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
ERCC2-207ENST00000586441 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
ERCC2-207ENST00000586441 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
ERCC2-207ENST00000586441 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
ERCC2-207ENST00000586441 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
ERCC2-207ENST00000586441 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
ERCC2-207ENST00000586441 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
ERCC2-207ENST00000586441 SLIT3O75094 1523 aa17.37■□□□□ 0.37
ERCC2-207ENST00000586441 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
ERCC2-207ENST00000586441 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
ERCC2-207ENST00000586441 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
ERCC2-207ENST00000586441 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
ERCC2-207ENST00000586441 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 EVA1CP58658 441 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 BRWD3Q6RI45 1802 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
ERCC2-207ENST00000586441 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
ERCC2-207ENST00000586441 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.37
ERCC2-207ENST00000586441 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
ERCC2-207ENST00000586441 THRAP3Q9Y2W1 955 aaKnown RBP17.33■□□□□ 0.36
ERCC2-207ENST00000586441 EP400Q96L91 3159 aa17.33■□□□□ 0.36
ERCC2-207ENST00000586441 USP47Q96K76 1375 aa17.32■□□□□ 0.36
ERCC2-207ENST00000586441 TMF1P82094 1093 aa17.32■□□□□ 0.36
ERCC2-207ENST00000586441 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
ERCC2-207ENST00000586441 TMC1Q8TDI8 760 aa17.32■□□□□ 0.36
ERCC2-207ENST00000586441 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
ERCC2-207ENST00000586441 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
ERCC2-207ENST00000586441 USP54Q70EL1 1684 aa17.3■□□□□ 0.36
ERCC2-207ENST00000586441 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
ERCC2-207ENST00000586441 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
ERCC2-207ENST00000586441 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
ERCC2-207ENST00000586441 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
ERCC2-207ENST00000586441 ABCC6O95255 1503 aa17.28■□□□□ 0.36
ERCC2-207ENST00000586441 COL18A1P39060 1754 aa17.28■□□□□ 0.36
ERCC2-207ENST00000586441 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
ERCC2-207ENST00000586441 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.36
ERCC2-207ENST00000586441 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
ERCC2-207ENST00000586441 A0A0G2JS52 829 aa17.26■□□□□ 0.35
ERCC2-207ENST00000586441 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
ERCC2-207ENST00000586441 MYT1Q01538 1121 aa17.26■□□□□ 0.35
ERCC2-207ENST00000586441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
ERCC2-207ENST00000586441 CRB1P82279 1406 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms