RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 FAM83GA6ND36 823 aa20.35■□□□□ 0.85
HDAC5-203ENST00000586339 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
HDAC5-203ENST00000586339 CDK19Q9BWU1 502 aa20.34■□□□□ 0.85
HDAC5-203ENST00000586339 ONECUT3O60422 494 aaPredicted RBP20.33■□□□□ 0.85
HDAC5-203ENST00000586339 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
HDAC5-203ENST00000586339 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
HDAC5-203ENST00000586339 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
HDAC5-203ENST00000586339 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
HDAC5-203ENST00000586339 BLMP54132 1417 aaPredicted RBP20.31■□□□□ 0.84
HDAC5-203ENST00000586339 SEPT12Q8IYM1 358 aa20.31■□□□□ 0.84
HDAC5-203ENST00000586339 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
HDAC5-203ENST00000586339 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
HDAC5-203ENST00000586339 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
HDAC5-203ENST00000586339 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
HDAC5-203ENST00000586339 SRCAPQ6ZRS2 3230 aa20.28■□□□□ 0.84
HDAC5-203ENST00000586339 ACEP12821 1306 aa20.27■□□□□ 0.84
HDAC5-203ENST00000586339 NRKQ7Z2Y5 1582 aa20.27■□□□□ 0.84
HDAC5-203ENST00000586339 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
HDAC5-203ENST00000586339 L3MBTL2Q969R5 705 aa20.27■□□□□ 0.84
HDAC5-203ENST00000586339 PRDM11Q9NQV5 511 aa20.27■□□□□ 0.84
HDAC5-203ENST00000586339 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
HDAC5-203ENST00000586339 BRD4O60885 1362 aaPredicted RBP20.26■□□□□ 0.83
HDAC5-203ENST00000586339 PPIP5K1Q6PFW1 1433 aa20.26■□□□□ 0.83
HDAC5-203ENST00000586339 KRT27Q7Z3Y8 459 aa20.25■□□□□ 0.83
HDAC5-203ENST00000586339 KIAA0232Q92628 1395 aa20.24■□□□□ 0.83
HDAC5-203ENST00000586339 SRPK2P78362 688 aaKnown RBP20.24■□□□□ 0.83
HDAC5-203ENST00000586339 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
HDAC5-203ENST00000586339 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
HDAC5-203ENST00000586339 FAM98CQ17RN3 349 aaKnown RBP20.22■□□□□ 0.83
HDAC5-203ENST00000586339 ZRANB1Q9UGI0 708 aa20.22■□□□□ 0.83
HDAC5-203ENST00000586339 RGPD1P0DJD0 1748 aa20.22■□□□□ 0.83
HDAC5-203ENST00000586339 A0A0G2JS52 829 aa20.21■□□□□ 0.83
HDAC5-203ENST00000586339 MYT1Q01538 1121 aa20.21■□□□□ 0.83
HDAC5-203ENST00000586339 SF3B2Q13435 895 aaKnown RBP20.21■□□□□ 0.83
HDAC5-203ENST00000586339 LMO7Q8WWI1 1683 aa20.21■□□□□ 0.83
HDAC5-203ENST00000586339 USP19O94966 1318 aa20.21■□□□□ 0.83
HDAC5-203ENST00000586339 CPDO75976 1380 aa20.21■□□□□ 0.83
HDAC5-203ENST00000586339 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
HDAC5-203ENST00000586339 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
HDAC5-203ENST00000586339 SIN3AQ96ST3 1273 aa20.19■□□□□ 0.82
HDAC5-203ENST00000586339 CABP2Q9NPB3 220 aa20.19■□□□□ 0.82
HDAC5-203ENST00000586339 USP6P35125 1406 aa20.19■□□□□ 0.82
HDAC5-203ENST00000586339 AKAP12Q02952 1782 aa20.18■□□□□ 0.82
HDAC5-203ENST00000586339 ZC3H6P61129 1189 aaKnown RBP20.17■□□□□ 0.82
HDAC5-203ENST00000586339 CHRNA2Q15822 529 aa20.17■□□□□ 0.82
HDAC5-203ENST00000586339 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
HDAC5-203ENST00000586339 NLRP13Q86W25 1043 aa20.17■□□□□ 0.82
HDAC5-203ENST00000586339 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
HDAC5-203ENST00000586339 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
HDAC5-203ENST00000586339 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
HDAC5-203ENST00000586339 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
HDAC5-203ENST00000586339 PIK3C2AO00443 1686 aa20.15■□□□□ 0.82
HDAC5-203ENST00000586339 CAMTA1Q9Y6Y1 1673 aa20.15■□□□□ 0.82
HDAC5-203ENST00000586339 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
HDAC5-203ENST00000586339 SLIT3O75094 1523 aa20.14■□□□□ 0.81
HDAC5-203ENST00000586339 DEFB132Q7Z7B7 95 aa20.14■□□□□ 0.81
HDAC5-203ENST00000586339 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
HDAC5-203ENST00000586339 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
HDAC5-203ENST00000586339 SBNO2Q9Y2G9 1366 aa20.12■□□□□ 0.81
HDAC5-203ENST00000586339 GCP02774 474 aa20.12■□□□□ 0.81
HDAC5-203ENST00000586339 BAG6P46379 1132 aa20.11■□□□□ 0.81
HDAC5-203ENST00000586339 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
HDAC5-203ENST00000586339 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
HDAC5-203ENST00000586339 EVA1CP58658 441 aa20.1■□□□□ 0.81
HDAC5-203ENST00000586339 COL5A2P05997 1499 aaPredicted RBP20.1■□□□□ 0.81
HDAC5-203ENST00000586339 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
HDAC5-203ENST00000586339 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
HDAC5-203ENST00000586339 COL18A1P39060 1754 aa20.08■□□□□ 0.81
HDAC5-203ENST00000586339 NLRP6P59044 892 aa20.07■□□□□ 0.8
HDAC5-203ENST00000586339 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
HDAC5-203ENST00000586339 THRAP3Q9Y2W1 955 aaKnown RBP20.07■□□□□ 0.8
HDAC5-203ENST00000586339 AATKQ6ZMQ8 1374 aa20.07■□□□□ 0.8
HDAC5-203ENST00000586339 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
HDAC5-203ENST00000586339 TCP11L2Q8N4U5 519 aa20.06■□□□□ 0.8
HDAC5-203ENST00000586339 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
HDAC5-203ENST00000586339 LRP5O75197 1615 aa20.05■□□□□ 0.8
HDAC5-203ENST00000586339 CPSF1Q10570 1443 aaKnown RBP20.05■□□□□ 0.8
HDAC5-203ENST00000586339 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
HDAC5-203ENST00000586339 USP54Q70EL1 1684 aa20.05■□□□□ 0.8
HDAC5-203ENST00000586339 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
HDAC5-203ENST00000586339 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
HDAC5-203ENST00000586339 CRB1P82279 1406 aa20.04■□□□□ 0.8
HDAC5-203ENST00000586339 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
HDAC5-203ENST00000586339 FAM182BQ5T319 152 aa20.03■□□□□ 0.8
HDAC5-203ENST00000586339 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
HDAC5-203ENST00000586339 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.8
HDAC5-203ENST00000586339 ABCC6O95255 1503 aa20.02■□□□□ 0.8
HDAC5-203ENST00000586339 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
HDAC5-203ENST00000586339 PARD3Q8TEW0 1356 aa20.01■□□□□ 0.79
HDAC5-203ENST00000586339 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
HDAC5-203ENST00000586339 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
HDAC5-203ENST00000586339 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
HDAC5-203ENST00000586339 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
HDAC5-203ENST00000586339 LRRC37A3O60309 1634 aa20■□□□□ 0.79
HDAC5-203ENST00000586339 NFAT5O94916 1531 aa20■□□□□ 0.79
HDAC5-203ENST00000586339 RREB1Q92766 1687 aa20■□□□□ 0.79
HDAC5-203ENST00000586339 SBF2Q86WG5 1849 aa19.98■□□□□ 0.79
HDAC5-203ENST00000586339 C11orf95C9JLR9 678 aaPredicted RBP19.98■□□□□ 0.79
HDAC5-203ENST00000586339 PEAK1Q9H792 1746 aa19.98■□□□□ 0.79
HDAC5-203ENST00000586339 TRIM37O94972 964 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms