RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 RETREG3Q86VR2 466 aa5.23□□□□□ -1.57
RPRD1A-204ENST00000585953 CFAP99D6REC4 459 aa5.23□□□□□ -1.57
RPRD1A-204ENST00000585953 SENP2Q9HC62 589 aa5.23□□□□□ -1.57
RPRD1A-204ENST00000585953 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
RPRD1A-204ENST00000585953 PRR7Q8TB68 274 aa5.22□□□□□ -1.57
RPRD1A-204ENST00000585953 USB1Q9BQ65 265 aaKnown RBP5.22□□□□□ -1.57
RPRD1A-204ENST00000585953 CD2BP2O95400 341 aaKnown RBP5.22□□□□□ -1.57
RPRD1A-204ENST00000585953 SPSB2Q99619 263 aa5.22□□□□□ -1.57
RPRD1A-204ENST00000585953 MSS51Q4VC12 460 aa5.21□□□□□ -1.58
RPRD1A-204ENST00000585953 TMEM259Q4ZIN3 620 aa5.21□□□□□ -1.58
RPRD1A-204ENST00000585953 TRIM47Q96LD4 638 aa5.21□□□□□ -1.58
RPRD1A-204ENST00000585953 SUZ12Q15022 739 aaKnown RBP5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 FAM160A2Q8N612 972 aaPredicted RBP5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 AP1G2O75843 785 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 HELBQ8NG08 1087 aaPredicted RBP5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 TSC1Q92574 1164 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 KIFC2Q96AC6 838 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 ATP13A2Q9NQ11 1180 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 PRDM9Q9NQV7 894 aa5.2□□□□□ -1.58
RPRD1A-204ENST00000585953 DESI1Q6ICB0 168 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 ZSCAN1Q8NBB4 408 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 BANK1Q8NDB2 785 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 USP17L8P0C7I0 530 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 SNRPBP14678 240 aaKnown RBP5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 CTDSPL2Q05D32 466 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 MCM6Q14566 821 aa5.19□□□□□ -1.58
RPRD1A-204ENST00000585953 DXOO77932 396 aaKnown RBP5.18□□□□□ -1.58
RPRD1A-204ENST00000585953 JUNDP17535 347 aa5.18□□□□□ -1.58
RPRD1A-204ENST00000585953 MMP16P51512 607 aa5.18□□□□□ -1.58
RPRD1A-204ENST00000585953 TTC24A2A3L6 582 aaPredicted RBP5.17□□□□□ -1.58
RPRD1A-204ENST00000585953 PER1O15534 1290 aaPredicted RBP5.17□□□□□ -1.58
RPRD1A-204ENST00000585953 FLIIQ13045 1269 aa5.17□□□□□ -1.58
RPRD1A-204ENST00000585953 SNRKQ9NRH2 765 aa5.17□□□□□ -1.58
RPRD1A-204ENST00000585953 LYPD8Q6UX82 237 aa5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 NPAS3Q8IXF0 933 aa5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 MTMR14Q8NCE2 650 aa5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 PTPRNQ16849 979 aa5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 LRRN4Q8WUT4 740 aa5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 HMX1Q9NP08 348 aaPredicted RBP5.16□□□□□ -1.58
RPRD1A-204ENST00000585953 SOCS7O14512 581 aa5.15□□□□□ -1.58
RPRD1A-204ENST00000585953 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.58
RPRD1A-204ENST00000585953 SMPD1P17405 629 aa5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 SNIP1Q8TAD8 396 aaKnown RBP5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 IRF7Q92985 503 aa5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 NUDT12Q9BQG2 462 aa5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 F12P00748 615 aaPredicted RBP5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 CCNYL3P0C7X3 344 aa5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 GJD4Q96KN9 370 aaPredicted RBP5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 NXF1Q9UBU9 619 aaKnown RBP5.14□□□□□ -1.59
RPRD1A-204ENST00000585953 WNT7AO00755 349 aa5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 GMPRP36959 345 aa5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 TRIM34Q9BYJ4 488 aa5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 FCF1Q9Y324 198 aaKnown RBP5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 MAP10Q9P2G4 905 aa5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 TIMELESSQ9UNS1 1208 aa5.13□□□□□ -1.59
RPRD1A-204ENST00000585953 C14orf37Q86TY3 774 aa5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 EPS8L1Q8TE68 723 aa5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 EVA1BQ9NVM1 165 aa5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 APBB1O00213 710 aa5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 ZBTB24O43167 697 aaPredicted RBP5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 UBTFP17480 764 aaKnown RBP5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 NR6A1Q15406 480 aa5.12□□□□□ -1.59
RPRD1A-204ENST00000585953 CTHP32929 405 aa5.11□□□□□ -1.59
RPRD1A-204ENST00000585953 KCNH2Q12809 1159 aa5.11□□□□□ -1.59
RPRD1A-204ENST00000585953 CCDC24Q8N4L8 307 aa5.11□□□□□ -1.59
RPRD1A-204ENST00000585953 POM121Q96HA1 1249 aa5.11□□□□□ -1.59
RPRD1A-204ENST00000585953 COG6Q9Y2V7 657 aa5.11□□□□□ -1.59
RPRD1A-204ENST00000585953 GPR37L1O60883 481 aa5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 PTCRAQ6ISU1 281 aaPredicted RBP5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 ERICH6Q7L0X2 663 aa5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 CLUAP1Q96AJ1 413 aa5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 TBC1D2BQ9UPU7 963 aa5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 NDUFB9Q9Y6M9 179 aa5.1□□□□□ -1.59
RPRD1A-204ENST00000585953 GDPD2Q9HCC8 539 aa5.09□□□□□ -1.59
RPRD1A-204ENST00000585953 UNC93B1Q9H1C4 597 aa5.09□□□□□ -1.59
RPRD1A-204ENST00000585953 H3BM21 787 aa5.08□□□□□ -1.6
RPRD1A-204ENST00000585953 RAD21O60216 631 aa5.08□□□□□ -1.6
RPRD1A-204ENST00000585953 PRM3Q9NNZ6 103 aa5.08□□□□□ -1.6
RPRD1A-204ENST00000585953 FKBPLQ9UIM3 349 aa5.08□□□□□ -1.6
RPRD1A-204ENST00000585953 KCNMA1Q12791 1236 aa5.08□□□□□ -1.6
RPRD1A-204ENST00000585953 A6NJR5 290 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 J3QL48 77 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 ABL2P42684 1182 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 ZMYND15Q9H091 742 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 PNMA1Q8ND90 353 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 ARMC2Q8NEN0 867 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 HPS1Q92902 700 aa5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 ZC3H4Q9UPT8 1303 aaKnown RBP5.07□□□□□ -1.6
RPRD1A-204ENST00000585953 IRF5Q13568 498 aa5.06□□□□□ -1.6
RPRD1A-204ENST00000585953 PROSER2Q86WR7 435 aaPredicted RBP5.06□□□□□ -1.6
RPRD1A-204ENST00000585953 MRGPRX2Q96LB1 330 aa5.06□□□□□ -1.6
RPRD1A-204ENST00000585953 TRIM32Q13049 653 aa5.06□□□□□ -1.6
RPRD1A-204ENST00000585953 NBPF14Q5TI25 921 aa5.06□□□□□ -1.6
RPRD1A-204ENST00000585953 LINC01559Q495D7 138 aa5.05□□□□□ -1.6
RPRD1A-204ENST00000585953 FNBP4Q8N3X1 1017 aaPredicted RBP5.05□□□□□ -1.6
RPRD1A-204ENST00000585953 GPKOWQ92917 476 aaPredicted RBP eCLIP5.05□□□□□ -1.6
RPRD1A-204ENST00000585953 KCTD17Q8N5Z5 321 aa5.05□□□□□ -1.6
RPRD1A-204ENST00000585953 BAP1Q92560 729 aa5.05□□□□□ -1.6
RPRD1A-204ENST00000585953 PDXDC2PQ6P474 469 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms