RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
RETREG3-203ENST00000585894 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
RETREG3-203ENST00000585894 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
RETREG3-203ENST00000585894 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
RETREG3-203ENST00000585894 C11orf95C9JLR9 678 aaPredicted RBP17.63■□□□□ 0.41
RETREG3-203ENST00000585894 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
RETREG3-203ENST00000585894 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
RETREG3-203ENST00000585894 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
RETREG3-203ENST00000585894 A0A1W2PP64 1363 aa17.61■□□□□ 0.41
RETREG3-203ENST00000585894 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
RETREG3-203ENST00000585894 KTN1Q86UP2 1357 aaKnown RBP17.61■□□□□ 0.41
RETREG3-203ENST00000585894 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
RETREG3-203ENST00000585894 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
RETREG3-203ENST00000585894 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
RETREG3-203ENST00000585894 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
RETREG3-203ENST00000585894 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
RETREG3-203ENST00000585894 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
RETREG3-203ENST00000585894 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
RETREG3-203ENST00000585894 ABTB2Q8N961 1025 aa17.58■□□□□ 0.41
RETREG3-203ENST00000585894 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
RETREG3-203ENST00000585894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.4
RETREG3-203ENST00000585894 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
RETREG3-203ENST00000585894 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
RETREG3-203ENST00000585894 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
RETREG3-203ENST00000585894 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
RETREG3-203ENST00000585894 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
RETREG3-203ENST00000585894 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
RETREG3-203ENST00000585894 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
RETREG3-203ENST00000585894 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
RETREG3-203ENST00000585894 ANKRD36BQ8N2N9 1353 aa17.55■□□□□ 0.4
RETREG3-203ENST00000585894 NME9Q86XW9 330 aa17.54■□□□□ 0.4
RETREG3-203ENST00000585894 RGS17Q9UGC6 210 aaPredicted RBP17.54■□□□□ 0.4
RETREG3-203ENST00000585894 KIF7Q2M1P5 1343 aa17.54■□□□□ 0.4
RETREG3-203ENST00000585894 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
RETREG3-203ENST00000585894 EDC4Q6P2E9 1401 aaKnown RBP17.54■□□□□ 0.4
RETREG3-203ENST00000585894 NLRP6P59044 892 aa17.52■□□□□ 0.4
RETREG3-203ENST00000585894 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
RETREG3-203ENST00000585894 AFF2P51816 1311 aa17.51■□□□□ 0.39
RETREG3-203ENST00000585894 TTC21AQ8NDW8 1320 aa17.51■□□□□ 0.39
RETREG3-203ENST00000585894 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
RETREG3-203ENST00000585894 CARD14Q9BXL6 1004 aa17.51■□□□□ 0.39
RETREG3-203ENST00000585894 USP19O94966 1318 aa17.5■□□□□ 0.39
RETREG3-203ENST00000585894 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
RETREG3-203ENST00000585894 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
RETREG3-203ENST00000585894 KIF20BQ96Q89 1820 aa17.5■□□□□ 0.39
RETREG3-203ENST00000585894 SOX12O15370 315 aa17.5■□□□□ 0.39
RETREG3-203ENST00000585894 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
RETREG3-203ENST00000585894 NSD3Q9BZ95 1437 aa17.49■□□□□ 0.39
RETREG3-203ENST00000585894 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
RETREG3-203ENST00000585894 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
RETREG3-203ENST00000585894 SLIT3O75094 1523 aa17.49■□□□□ 0.39
RETREG3-203ENST00000585894 CCDC7Q96M83 1385 aa17.48■□□□□ 0.39
RETREG3-203ENST00000585894 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
RETREG3-203ENST00000585894 FAM83GA6ND36 823 aa17.47■□□□□ 0.39
RETREG3-203ENST00000585894 GCP02774 474 aa17.47■□□□□ 0.39
RETREG3-203ENST00000585894 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
RETREG3-203ENST00000585894 POTEAQ6S8J7 498 aa17.47■□□□□ 0.39
RETREG3-203ENST00000585894 PANK3Q9H999 370 aa17.47■□□□□ 0.39
RETREG3-203ENST00000585894 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
RETREG3-203ENST00000585894 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
RETREG3-203ENST00000585894 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 USP31Q70CQ4 1352 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 SLIT2O94813 1529 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 NFAT5O94916 1531 aa17.45■□□□□ 0.38
RETREG3-203ENST00000585894 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
RETREG3-203ENST00000585894 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
RETREG3-203ENST00000585894 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
RETREG3-203ENST00000585894 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
RETREG3-203ENST00000585894 USP21Q9UK80 565 aa17.44■□□□□ 0.38
RETREG3-203ENST00000585894 LTN1O94822 1766 aa17.43■□□□□ 0.38
RETREG3-203ENST00000585894 FYB1O15117 783 aa17.43■□□□□ 0.38
RETREG3-203ENST00000585894 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
RETREG3-203ENST00000585894 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
RETREG3-203ENST00000585894 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.42■□□□□ 0.38
RETREG3-203ENST00000585894 FBLN1P23142 703 aa17.41■□□□□ 0.38
RETREG3-203ENST00000585894 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-203ENST00000585894 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
RETREG3-203ENST00000585894 ILDR2Q71H61 639 aa17.41■□□□□ 0.38
RETREG3-203ENST00000585894 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
RETREG3-203ENST00000585894 COL18A1P39060 1754 aa17.4■□□□□ 0.38
RETREG3-203ENST00000585894 CPDO75976 1380 aa17.4■□□□□ 0.38
RETREG3-203ENST00000585894 COG3Q96JB2 828 aa17.4■□□□□ 0.38
RETREG3-203ENST00000585894 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
RETREG3-203ENST00000585894 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
RETREG3-203ENST00000585894 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.37
RETREG3-203ENST00000585894 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
RETREG3-203ENST00000585894 ATRNO75882 1429 aa17.38■□□□□ 0.37
RETREG3-203ENST00000585894 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
RETREG3-203ENST00000585894 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
RETREG3-203ENST00000585894 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
RETREG3-203ENST00000585894 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
RETREG3-203ENST00000585894 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
RETREG3-203ENST00000585894 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
RETREG3-203ENST00000585894 GLI3P10071 1580 aa17.35■□□□□ 0.37
RETREG3-203ENST00000585894 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
RETREG3-203ENST00000585894 AATKQ6ZMQ8 1374 aa17.34■□□□□ 0.37
RETREG3-203ENST00000585894 CCDC9Q9Y3X0 531 aaKnown RBP17.34■□□□□ 0.37
RETREG3-203ENST00000585894 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms