RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ABCA3Q99758 1704 aa19.38■□□□□ 0.69
PRKCSH-202ENST00000585540 CABP1Q9NZU7 370 aa19.36■□□□□ 0.69
PRKCSH-202ENST00000585540 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
PRKCSH-202ENST00000585540 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
PRKCSH-202ENST00000585540 CRYBG1Q9Y4K1 1723 aa19.34■□□□□ 0.69
PRKCSH-202ENST00000585540 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
PRKCSH-202ENST00000585540 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-202ENST00000585540 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
PRKCSH-202ENST00000585540 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.69
PRKCSH-202ENST00000585540 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.68
PRKCSH-202ENST00000585540 LMOD2Q6P5Q4 547 aa19.33■□□□□ 0.68
PRKCSH-202ENST00000585540 SSH2Q76I76 1423 aa19.33■□□□□ 0.68
PRKCSH-202ENST00000585540 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-202ENST00000585540 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
PRKCSH-202ENST00000585540 AFF2P51816 1311 aa19.31■□□□□ 0.68
PRKCSH-202ENST00000585540 FNBP4Q8N3X1 1017 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-202ENST00000585540 TERF2IPQ9NYB0 399 aa19.31■□□□□ 0.68
PRKCSH-202ENST00000585540 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
PRKCSH-202ENST00000585540 PHRF1Q9P1Y6 1649 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 NLRP13Q86W25 1043 aa19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 NGLY1Q96IV0 654 aa19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-202ENST00000585540 SLIT2O94813 1529 aa19.29■□□□□ 0.68
PRKCSH-202ENST00000585540 CDK12Q9NYV4 1490 aaPredicted RBP19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 USP19O94966 1318 aa19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 USP54Q70EL1 1684 aa19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 ABTB2Q8N961 1025 aa19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 CD163L1Q9NR16 1453 aa19.28■□□□□ 0.68
PRKCSH-202ENST00000585540 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
PRKCSH-202ENST00000585540 ANKRD36BQ8N2N9 1353 aa19.27■□□□□ 0.68
PRKCSH-202ENST00000585540 TMC1Q8TDI8 760 aa19.26■□□□□ 0.67
PRKCSH-202ENST00000585540 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
PRKCSH-202ENST00000585540 SLIT3O75094 1523 aa19.25■□□□□ 0.67
PRKCSH-202ENST00000585540 PIK3C2AO00443 1686 aa19.25■□□□□ 0.67
PRKCSH-202ENST00000585540 TRPC5Q9UL62 973 aaPredicted RBP19.25■□□□□ 0.67
PRKCSH-202ENST00000585540 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
PRKCSH-202ENST00000585540 A0A1W2PP64 1363 aa19.24■□□□□ 0.67
PRKCSH-202ENST00000585540 CPDO75976 1380 aa19.24■□□□□ 0.67
PRKCSH-202ENST00000585540 USP21Q9UK80 565 aa19.24■□□□□ 0.67
PRKCSH-202ENST00000585540 USP31Q70CQ4 1352 aa19.23■□□□□ 0.67
PRKCSH-202ENST00000585540 ATRNO75882 1429 aa19.23■□□□□ 0.67
PRKCSH-202ENST00000585540 POTEAQ6S8J7 498 aa19.22■□□□□ 0.67
PRKCSH-202ENST00000585540 KCNH5Q8NCM2 988 aa19.22■□□□□ 0.67
PRKCSH-202ENST00000585540 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
PRKCSH-202ENST00000585540 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
PRKCSH-202ENST00000585540 ABCC6O95255 1503 aa19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 HSPA5P11021 654 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 RXRBP28702 533 aa19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 RBM6P78332 1123 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 UNC5CLQ8IV45 518 aa19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
PRKCSH-202ENST00000585540 NLRP6P59044 892 aa19.2■□□□□ 0.66
PRKCSH-202ENST00000585540 MYOM1P52179 1685 aa19.2■□□□□ 0.66
PRKCSH-202ENST00000585540 PRDM11Q9NQV5 511 aa19.19■□□□□ 0.66
PRKCSH-202ENST00000585540 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
PRKCSH-202ENST00000585540 GCP02774 474 aa19.18■□□□□ 0.66
PRKCSH-202ENST00000585540 QTRT2Q9H974 415 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-202ENST00000585540 KIAA0232Q92628 1395 aa19.17■□□□□ 0.66
PRKCSH-202ENST00000585540 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
PRKCSH-202ENST00000585540 VPS72Q15906 364 aa19.15■□□□□ 0.66
PRKCSH-202ENST00000585540 OVOS2A0A0J9YW53 1432 aa19.15■□□□□ 0.66
PRKCSH-202ENST00000585540 OVOS2Q6IE36 1432 aa19.15■□□□□ 0.66
PRKCSH-202ENST00000585540 LMO7Q8WWI1 1683 aa19.14■□□□□ 0.66
PRKCSH-202ENST00000585540 NUTM2GQ5VZR2 741 aa19.14■□□□□ 0.65
PRKCSH-202ENST00000585540 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
PRKCSH-202ENST00000585540 NFAT5O94916 1531 aa19.13■□□□□ 0.65
PRKCSH-202ENST00000585540 GJD4Q96KN9 370 aaPredicted RBP19.12■□□□□ 0.65
PRKCSH-202ENST00000585540 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
PRKCSH-202ENST00000585540 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
PRKCSH-202ENST00000585540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRKCSH-202ENST00000585540 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
PRKCSH-202ENST00000585540 RGS12O14924 1447 aa19.09■□□□□ 0.65
PRKCSH-202ENST00000585540 PLEKHG5O94827 1062 aa19.09■□□□□ 0.65
PRKCSH-202ENST00000585540 COG3Q96JB2 828 aa19.09■□□□□ 0.65
PRKCSH-202ENST00000585540 GLI3P10071 1580 aa19.09■□□□□ 0.65
PRKCSH-202ENST00000585540 ARHGEF25Q86VW2 580 aa19.08■□□□□ 0.64
PRKCSH-202ENST00000585540 NME9Q86XW9 330 aa19.08■□□□□ 0.64
PRKCSH-202ENST00000585540 COL5A2P05997 1499 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-202ENST00000585540 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
PRKCSH-202ENST00000585540 NSD2O96028 1365 aa19.06■□□□□ 0.64
PRKCSH-202ENST00000585540 COL18A1P39060 1754 aa19.06■□□□□ 0.64
PRKCSH-202ENST00000585540 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
PRKCSH-202ENST00000585540 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
PRKCSH-202ENST00000585540 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
PRKCSH-202ENST00000585540 SPATA31A5Q5VU36 1347 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 SPATA31A7Q8IWB4 1347 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 ONECUT3O60422 494 aaPredicted RBP19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 BLMP54132 1417 aaPredicted RBP19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 EVA1CP58658 441 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 CHRNA2Q15822 529 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 THRAP3Q9Y2W1 955 aaKnown RBP19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 CCDC9Q9Y3X0 531 aaKnown RBP19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 RTL1A6NKG5 1358 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 LTN1O94822 1766 aa19.04■□□□□ 0.64
PRKCSH-202ENST00000585540 FYB1O15117 783 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms