RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NUTM2GQ5VZR2 741 aa19.48■□□□□ 0.71
CDK5RAP3-233ENST00000584186 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-233ENST00000584186 QRICH2Q9H0J4 1663 aa19.48■□□□□ 0.71
CDK5RAP3-233ENST00000584186 PLEKHG3A1L390 1219 aa19.47■□□□□ 0.71
CDK5RAP3-233ENST00000584186 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
CDK5RAP3-233ENST00000584186 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
CDK5RAP3-233ENST00000584186 TOPAZ1Q8N9V7 1692 aa19.46■□□□□ 0.71
CDK5RAP3-233ENST00000584186 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP3-233ENST00000584186 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP3-233ENST00000584186 PPIP5K1Q6PFW1 1433 aa19.45■□□□□ 0.7
CDK5RAP3-233ENST00000584186 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
CDK5RAP3-233ENST00000584186 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
CDK5RAP3-233ENST00000584186 VPS72Q15906 364 aa19.44■□□□□ 0.7
CDK5RAP3-233ENST00000584186 BTG4Q9NY30 223 aa19.44■□□□□ 0.7
CDK5RAP3-233ENST00000584186 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
CDK5RAP3-233ENST00000584186 CABP1Q9NZU7 370 aa19.43■□□□□ 0.7
CDK5RAP3-233ENST00000584186 EP400Q96L91 3159 aa19.42■□□□□ 0.7
CDK5RAP3-233ENST00000584186 GLI3P10071 1580 aa19.42■□□□□ 0.7
CDK5RAP3-233ENST00000584186 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
CDK5RAP3-233ENST00000584186 PRDM11Q9NQV5 511 aa19.42■□□□□ 0.7
CDK5RAP3-233ENST00000584186 CARD11Q9BXL7 1154 aa19.41■□□□□ 0.7
CDK5RAP3-233ENST00000584186 NWD2Q9ULI1 1742 aa19.41■□□□□ 0.7
CDK5RAP3-233ENST00000584186 A0A0G2JS52 829 aa19.39■□□□□ 0.69
CDK5RAP3-233ENST00000584186 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-233ENST00000584186 MYT1Q01538 1121 aa19.39■□□□□ 0.69
CDK5RAP3-233ENST00000584186 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-233ENST00000584186 CHRNA2Q15822 529 aa19.38■□□□□ 0.69
CDK5RAP3-233ENST00000584186 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
CDK5RAP3-233ENST00000584186 KIAA0232Q92628 1395 aa19.38■□□□□ 0.69
CDK5RAP3-233ENST00000584186 CRYBG1Q9Y4K1 1723 aa19.38■□□□□ 0.69
CDK5RAP3-233ENST00000584186 FAM98CQ17RN3 349 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-233ENST00000584186 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
CDK5RAP3-233ENST00000584186 PHRF1Q9P1Y6 1649 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-233ENST00000584186 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
CDK5RAP3-233ENST00000584186 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
CDK5RAP3-233ENST00000584186 USP6P35125 1406 aa19.34■□□□□ 0.69
CDK5RAP3-233ENST00000584186 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
CDK5RAP3-233ENST00000584186 ZBTB7CA1YPR0 619 aa19.31■□□□□ 0.68
CDK5RAP3-233ENST00000584186 EVA1CP58658 441 aa19.31■□□□□ 0.68
CDK5RAP3-233ENST00000584186 NLRP6P59044 892 aa19.31■□□□□ 0.68
CDK5RAP3-233ENST00000584186 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
CDK5RAP3-233ENST00000584186 BRD4O60885 1362 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-233ENST00000584186 BRWD3Q6RI45 1802 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 USP19O94966 1318 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 SPATA31A5Q5VU36 1347 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 SPATA31A7Q8IWB4 1347 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 GCP02774 474 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 NRKQ7Z2Y5 1582 aa19.3■□□□□ 0.68
CDK5RAP3-233ENST00000584186 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
CDK5RAP3-233ENST00000584186 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
CDK5RAP3-233ENST00000584186 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
CDK5RAP3-233ENST00000584186 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
CDK5RAP3-233ENST00000584186 SBNO2Q9Y2G9 1366 aa19.28■□□□□ 0.68
CDK5RAP3-233ENST00000584186 TMC1Q8TDI8 760 aa19.27■□□□□ 0.68
CDK5RAP3-233ENST00000584186 CPDO75976 1380 aa19.27■□□□□ 0.68
CDK5RAP3-233ENST00000584186 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
CDK5RAP3-233ENST00000584186 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SOX12O15370 315 aa19.25■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-233ENST00000584186 LARP1Q6PKG0 1096 aaKnown RBP19.24■□□□□ 0.67
CDK5RAP3-233ENST00000584186 BLMP54132 1417 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-233ENST00000584186 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
CDK5RAP3-233ENST00000584186 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
CDK5RAP3-233ENST00000584186 FAM182BQ5T319 152 aa19.23■□□□□ 0.67
CDK5RAP3-233ENST00000584186 PIK3C2AO00443 1686 aa19.23■□□□□ 0.67
CDK5RAP3-233ENST00000584186 AKAP12Q02952 1782 aa19.22■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
CDK5RAP3-233ENST00000584186 CPSF1Q10570 1443 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-233ENST00000584186 TTC21AQ8NDW8 1320 aa19.22■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
CDK5RAP3-233ENST00000584186 SLIT3O75094 1523 aa19.2■□□□□ 0.66
CDK5RAP3-233ENST00000584186 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
CDK5RAP3-233ENST00000584186 DEFB132Q7Z7B7 95 aa19.2■□□□□ 0.66
CDK5RAP3-233ENST00000584186 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
CDK5RAP3-233ENST00000584186 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 TCP11L2Q8N4U5 519 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 TESK2Q96S53 571 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 AATKQ6ZMQ8 1374 aa19.18■□□□□ 0.66
CDK5RAP3-233ENST00000584186 COL5A2P05997 1499 aaPredicted RBP19.17■□□□□ 0.66
CDK5RAP3-233ENST00000584186 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
CDK5RAP3-233ENST00000584186 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
CDK5RAP3-233ENST00000584186 BARGINQ6ZT62 677 aa19.16■□□□□ 0.66
CDK5RAP3-233ENST00000584186 NME9Q86XW9 330 aa19.16■□□□□ 0.66
CDK5RAP3-233ENST00000584186 MON2Q7Z3U7 1717 aa19.16■□□□□ 0.66
CDK5RAP3-233ENST00000584186 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
CDK5RAP3-233ENST00000584186 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
CDK5RAP3-233ENST00000584186 USP47Q96K76 1375 aa19.15■□□□□ 0.66
CDK5RAP3-233ENST00000584186 SRCAPQ6ZRS2 3230 aa19.14■□□□□ 0.66
CDK5RAP3-233ENST00000584186 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
CDK5RAP3-233ENST00000584186 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
CDK5RAP3-233ENST00000584186 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-233ENST00000584186 A0A1W2PP64 1363 aa19.14■□□□□ 0.65
CDK5RAP3-233ENST00000584186 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
CDK5RAP3-233ENST00000584186 THRAP3Q9Y2W1 955 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-233ENST00000584186 CRB1P82279 1406 aa19.13■□□□□ 0.65
CDK5RAP3-233ENST00000584186 CLSPNQ9HAW4 1339 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms