RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 TONSLQ96HA7 1378 aa30.68■■■□□ 2.5
PPP4R1-228ENST00000584074 ABCA3Q99758 1704 aa30.68■■■□□ 2.5
PPP4R1-228ENST00000584074 UPF1Q92900 1129 aaKnown RBP eCLIP30.67■■■□□ 2.5
PPP4R1-228ENST00000584074 GJD4Q96KN9 370 aaPredicted RBP30.65■■■□□ 2.5
PPP4R1-228ENST00000584074 FAM83GA6ND36 823 aa30.64■■■□□ 2.5
PPP4R1-228ENST00000584074 PPIP5K1Q6PFW1 1433 aa30.64■■■□□ 2.49
PPP4R1-228ENST00000584074 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.61■■■□□ 2.49
PPP4R1-228ENST00000584074 EVC2Q86UK5 1308 aa30.6■■■□□ 2.49
PPP4R1-228ENST00000584074 NUTM2GQ5VZR2 741 aa30.59■■■□□ 2.49
PPP4R1-228ENST00000584074 RALGAPBQ86X10 1494 aa30.58■■■□□ 2.49
PPP4R1-228ENST00000584074 CARD11Q9BXL7 1154 aa30.58■■■□□ 2.49
PPP4R1-228ENST00000584074 CABP1Q9NZU7 370 aa30.58■■■□□ 2.49
PPP4R1-228ENST00000584074 PLCH1Q4KWH8 1693 aa30.57■■■□□ 2.48
PPP4R1-228ENST00000584074 GLI3P10071 1580 aa30.55■■■□□ 2.48
PPP4R1-228ENST00000584074 VPS72Q15906 364 aa30.55■■■□□ 2.48
PPP4R1-228ENST00000584074 CRYBG1Q9Y4K1 1723 aa30.55■■■□□ 2.48
PPP4R1-228ENST00000584074 BTG4Q9NY30 223 aa30.54■■■□□ 2.48
PPP4R1-228ENST00000584074 NWD2Q9ULI1 1742 aa30.53■■■□□ 2.48
PPP4R1-228ENST00000584074 ABTB2Q8N961 1025 aa30.53■■■□□ 2.48
PPP4R1-228ENST00000584074 CCDC9Q9Y3X0 531 aaKnown RBP30.52■■■□□ 2.48
PPP4R1-228ENST00000584074 PRDM11Q9NQV5 511 aa30.5■■■□□ 2.47
PPP4R1-228ENST00000584074 ATAD2Q6PL18 1390 aa30.5■■■□□ 2.47
PPP4R1-228ENST00000584074 COL14A1Q05707 1796 aaKnown RBP30.49■■■□□ 2.47
PPP4R1-228ENST00000584074 KIAA0232Q92628 1395 aa30.49■■■□□ 2.47
PPP4R1-228ENST00000584074 ZC3H6P61129 1189 aaKnown RBP30.47■■■□□ 2.47
PPP4R1-228ENST00000584074 PHRF1Q9P1Y6 1649 aaKnown RBP30.47■■■□□ 2.47
PPP4R1-228ENST00000584074 USP6P35125 1406 aa30.47■■■□□ 2.47
PPP4R1-228ENST00000584074 NRAPQ86VF7 1730 aa30.45■■■□□ 2.47
PPP4R1-228ENST00000584074 BRD4O60885 1362 aaPredicted RBP30.45■■■□□ 2.47
PPP4R1-228ENST00000584074 SBNO2Q9Y2G9 1366 aa30.45■■■□□ 2.47
PPP4R1-228ENST00000584074 CHRNA2Q15822 529 aa30.45■■■□□ 2.47
PPP4R1-228ENST00000584074 EP400Q96L91 3159 aa30.44■■■□□ 2.46
PPP4R1-228ENST00000584074 USP19O94966 1318 aa30.44■■■□□ 2.46
PPP4R1-228ENST00000584074 NLRP13Q86W25 1043 aa30.43■■■□□ 2.46
PPP4R1-228ENST00000584074 SEPT12Q8IYM1 358 aa30.43■■■□□ 2.46
PPP4R1-228ENST00000584074 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
PPP4R1-228ENST00000584074 ONECUT3O60422 494 aaPredicted RBP30.41■■■□□ 2.46
PPP4R1-228ENST00000584074 SSH2Q76I76 1423 aa30.4■■■□□ 2.46
PPP4R1-228ENST00000584074 NRKQ7Z2Y5 1582 aa30.39■■■□□ 2.46
PPP4R1-228ENST00000584074 GCP02774 474 aa30.38■■■□□ 2.45
PPP4R1-228ENST00000584074 NLRP6P59044 892 aa30.38■■■□□ 2.45
PPP4R1-228ENST00000584074 ZNF692Q9BU19 519 aaPredicted RBP30.38■■■□□ 2.45
PPP4R1-228ENST00000584074 FAM98CQ17RN3 349 aaKnown RBP30.37■■■□□ 2.45
PPP4R1-228ENST00000584074 SPATA31A5Q5VU36 1347 aa30.36■■■□□ 2.45
PPP4R1-228ENST00000584074 SPATA31A7Q8IWB4 1347 aa30.36■■■□□ 2.45
PPP4R1-228ENST00000584074 STRN4Q9NRL3 753 aa30.35■■■□□ 2.45
PPP4R1-228ENST00000584074 CPDO75976 1380 aa30.35■■■□□ 2.45
PPP4R1-228ENST00000584074 CPSF1Q10570 1443 aaKnown RBP30.35■■■□□ 2.45
PPP4R1-228ENST00000584074 TTC21BQ7Z4L5 1316 aa30.34■■■□□ 2.45
PPP4R1-228ENST00000584074 A0A0G2JS52 829 aa30.34■■■□□ 2.45
PPP4R1-228ENST00000584074 MYT1Q01538 1121 aa30.34■■■□□ 2.45
PPP4R1-228ENST00000584074 ST20-MTHFSA0A0A6YYL1 179 aa30.32■■■□□ 2.44
PPP4R1-228ENST00000584074 BRWD3Q6RI45 1802 aa30.31■■■□□ 2.44
PPP4R1-228ENST00000584074 KTN1Q86UP2 1357 aaKnown RBP30.31■■■□□ 2.44
PPP4R1-228ENST00000584074 PIK3C2AO00443 1686 aa30.31■■■□□ 2.44
PPP4R1-228ENST00000584074 KRT27Q7Z3Y8 459 aa30.3■■■□□ 2.44
PPP4R1-228ENST00000584074 TMC1Q8TDI8 760 aa30.3■■■□□ 2.44
PPP4R1-228ENST00000584074 TESK2Q96S53 571 aa30.3■■■□□ 2.44
PPP4R1-228ENST00000584074 AKAP12Q02952 1782 aa30.29■■■□□ 2.44
PPP4R1-228ENST00000584074 EVA1CP58658 441 aa30.29■■■□□ 2.44
PPP4R1-228ENST00000584074 CAMTA1Q9Y6Y1 1673 aa30.29■■■□□ 2.44
PPP4R1-228ENST00000584074 SPATA31A1Q5TZJ5 1347 aa30.28■■■□□ 2.44
PPP4R1-228ENST00000584074 SLIT3O75094 1523 aa30.28■■■□□ 2.44
PPP4R1-228ENST00000584074 TTC21AQ8NDW8 1320 aa30.27■■■□□ 2.44
PPP4R1-228ENST00000584074 CLSPNQ9HAW4 1339 aa30.27■■■□□ 2.44
PPP4R1-228ENST00000584074 ZBTB7CA1YPR0 619 aa30.27■■■□□ 2.44
PPP4R1-228ENST00000584074 SLC12A5Q9H2X9 1139 aa30.27■■■□□ 2.44
PPP4R1-228ENST00000584074 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
PPP4R1-228ENST00000584074 LMO7Q8WWI1 1683 aa30.26■■■□□ 2.43
PPP4R1-228ENST00000584074 CD163L1Q9NR16 1453 aa30.25■■■□□ 2.43
PPP4R1-228ENST00000584074 LARP1Q6PKG0 1096 aaKnown RBP30.24■■■□□ 2.43
PPP4R1-228ENST00000584074 PUS7Q96PZ0 661 aaKnown RBP30.24■■■□□ 2.43
PPP4R1-228ENST00000584074 USP35Q9P2H5 1018 aa30.24■■■□□ 2.43
PPP4R1-228ENST00000584074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.23■■■□□ 2.431e-7■■□□□ 14.3
PPP4R1-228ENST00000584074 TIMELESSQ9UNS1 1208 aa30.23■■■□□ 2.43
PPP4R1-228ENST00000584074 USP47Q96K76 1375 aa30.21■■■□□ 2.43
PPP4R1-228ENST00000584074 HDGFL2Q7Z4V5 671 aaPredicted RBP30.21■■■□□ 2.43
PPP4R1-228ENST00000584074 AATKQ6ZMQ8 1374 aa30.2■■■□□ 2.43
PPP4R1-228ENST00000584074 MON2Q7Z3U7 1717 aa30.2■■■□□ 2.43
PPP4R1-228ENST00000584074 SOX12O15370 315 aa30.2■■■□□ 2.43
PPP4R1-228ENST00000584074 ZRANB1Q9UGI0 708 aa30.2■■■□□ 2.43
PPP4R1-228ENST00000584074 BLMP54132 1417 aaPredicted RBP30.2■■■□□ 2.42
PPP4R1-228ENST00000584074 THSD7AQ9UPZ6 1657 aa30.2■■■□□ 2.42
PPP4R1-228ENST00000584074 COL5A2P05997 1499 aaPredicted RBP30.19■■■□□ 2.42
PPP4R1-228ENST00000584074 FAM182BQ5T319 152 aa30.18■■■□□ 2.42
PPP4R1-228ENST00000584074 KCNH5Q8NCM2 988 aa30.18■■■□□ 2.42
PPP4R1-228ENST00000584074 TERF2IPQ9NYB0 399 aa30.18■■■□□ 2.42
PPP4R1-228ENST00000584074 SLC24A1O60721 1099 aa30.17■■■□□ 2.42
PPP4R1-228ENST00000584074 NME9Q86XW9 330 aa30.17■■■□□ 2.42
PPP4R1-228ENST00000584074 A0A1W2PP64 1363 aa30.16■■■□□ 2.42
PPP4R1-228ENST00000584074 ARHGEF25Q86VW2 580 aa30.16■■■□□ 2.42
PPP4R1-228ENST00000584074 BARGINQ6ZT62 677 aa30.15■■■□□ 2.42
PPP4R1-228ENST00000584074 AXIN2Q9Y2T1 843 aa30.15■■■□□ 2.42
PPP4R1-228ENST00000584074 TCP11L2Q8N4U5 519 aa30.14■■■□□ 2.42
PPP4R1-228ENST00000584074 CCER1Q8TC90 406 aaPredicted RBP30.14■■■□□ 2.42
PPP4R1-228ENST00000584074 EDC4Q6P2E9 1401 aaKnown RBP30.13■■■□□ 2.41
PPP4R1-228ENST00000584074 USP31Q70CQ4 1352 aa30.13■■■□□ 2.41
PPP4R1-228ENST00000584074 NFAT5O94916 1531 aa30.12■■■□□ 2.41
PPP4R1-228ENST00000584074 TMF1P82094 1093 aa30.11■■■□□ 2.41
PPP4R1-228ENST00000584074 SF3B2Q13435 895 aaKnown RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms