RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 ONECUT3O60422 494 aaPredicted RBP21.05■□□□□ 0.96
ITGB4-208ENST00000582629 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
ITGB4-208ENST00000582629 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
ITGB4-208ENST00000582629 PAK3O75914 559 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-208ENST00000582629 BTG4Q9NY30 223 aa21.02■□□□□ 0.96
ITGB4-208ENST00000582629 TOPAZ1Q8N9V7 1692 aa21.02■□□□□ 0.95
ITGB4-208ENST00000582629 KRT27Q7Z3Y8 459 aa21■□□□□ 0.95
ITGB4-208ENST00000582629 CDK19Q9BWU1 502 aa21■□□□□ 0.95
ITGB4-208ENST00000582629 PHRF1Q9P1Y6 1649 aaKnown RBP20.98■□□□□ 0.95
ITGB4-208ENST00000582629 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
ITGB4-208ENST00000582629 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
ITGB4-208ENST00000582629 A0A0G2JS52 829 aa20.97■□□□□ 0.95
ITGB4-208ENST00000582629 MYT1Q01538 1121 aa20.97■□□□□ 0.95
ITGB4-208ENST00000582629 FAM98CQ17RN3 349 aaKnown RBP20.97■□□□□ 0.95
ITGB4-208ENST00000582629 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
ITGB4-208ENST00000582629 CCDC61Q9Y6R9 512 aa20.96■□□□□ 0.95
ITGB4-208ENST00000582629 NBPF1Q3BBV0 1214 aa20.94■□□□□ 0.94
ITGB4-208ENST00000582629 DEFB132Q7Z7B7 95 aa20.94■□□□□ 0.94
ITGB4-208ENST00000582629 ACEP12821 1306 aa20.94■□□□□ 0.94
ITGB4-208ENST00000582629 SPATA31A5Q5VU36 1347 aa20.94■□□□□ 0.94
ITGB4-208ENST00000582629 SPATA31A7Q8IWB4 1347 aa20.94■□□□□ 0.94
ITGB4-208ENST00000582629 PLEKHG3A1L390 1219 aa20.93■□□□□ 0.94
ITGB4-208ENST00000582629 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
ITGB4-208ENST00000582629 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
ITGB4-208ENST00000582629 NBPF8Q3BBV2 869 aa20.92■□□□□ 0.94
ITGB4-208ENST00000582629 CENPJQ9HC77 1338 aaPredicted RBP20.91■□□□□ 0.94
ITGB4-208ENST00000582629 SRCAPQ6ZRS2 3230 aa20.9■□□□□ 0.94
ITGB4-208ENST00000582629 RGPD1P0DJD0 1748 aa20.9■□□□□ 0.94
ITGB4-208ENST00000582629 QRICH2Q9H0J4 1663 aa20.89■□□□□ 0.94
ITGB4-208ENST00000582629 NUTM2GQ5VZR2 741 aa20.89■□□□□ 0.93
ITGB4-208ENST00000582629 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.93
ITGB4-208ENST00000582629 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
ITGB4-208ENST00000582629 CHRNA2Q15822 529 aa20.88■□□□□ 0.93
ITGB4-208ENST00000582629 PPIP5K1Q6PFW1 1433 aa20.87■□□□□ 0.93
ITGB4-208ENST00000582629 SPATA31A1Q5TZJ5 1347 aa20.87■□□□□ 0.93
ITGB4-208ENST00000582629 BAG6P46379 1132 aa20.87■□□□□ 0.93
ITGB4-208ENST00000582629 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
ITGB4-208ENST00000582629 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
ITGB4-208ENST00000582629 CABP2Q9NPB3 220 aa20.85■□□□□ 0.93
ITGB4-208ENST00000582629 STRN4Q9NRL3 753 aa20.85■□□□□ 0.93
ITGB4-208ENST00000582629 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
ITGB4-208ENST00000582629 USP19O94966 1318 aa20.84■□□□□ 0.93
ITGB4-208ENST00000582629 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
ITGB4-208ENST00000582629 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
ITGB4-208ENST00000582629 SSH2Q76I76 1423 aa20.83■□□□□ 0.93
ITGB4-208ENST00000582629 CPDO75976 1380 aa20.83■□□□□ 0.92
ITGB4-208ENST00000582629 LMO7Q8WWI1 1683 aa20.83■□□□□ 0.92
ITGB4-208ENST00000582629 NLRP13Q86W25 1043 aa20.82■□□□□ 0.92
ITGB4-208ENST00000582629 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
ITGB4-208ENST00000582629 CAMTA1Q9Y6Y1 1673 aa20.81■□□□□ 0.92
ITGB4-208ENST00000582629 EVA1CP58658 441 aa20.81■□□□□ 0.92
ITGB4-208ENST00000582629 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
ITGB4-208ENST00000582629 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
ITGB4-208ENST00000582629 BARGINQ6ZT62 677 aa20.79■□□□□ 0.92
ITGB4-208ENST00000582629 USP6P35125 1406 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 GCP02774 474 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 EN1Q05925 392 aaPredicted RBP20.78■□□□□ 0.92
ITGB4-208ENST00000582629 SIN3AQ96ST3 1273 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 LRP5O75197 1615 aa20.78■□□□□ 0.92
ITGB4-208ENST00000582629 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
ITGB4-208ENST00000582629 EVC2Q86UK5 1308 aa20.77■□□□□ 0.91
ITGB4-208ENST00000582629 LARP1Q6PKG0 1096 aaKnown RBP20.76■□□□□ 0.91
ITGB4-208ENST00000582629 ROCK2O75116 1388 aaKnown RBP20.75■□□□□ 0.91
ITGB4-208ENST00000582629 SLIT3O75094 1523 aa20.75■□□□□ 0.91
ITGB4-208ENST00000582629 TCP11L2Q8N4U5 519 aa20.75■□□□□ 0.91
ITGB4-208ENST00000582629 COL5A2P05997 1499 aaPredicted RBP20.75■□□□□ 0.91
ITGB4-208ENST00000582629 PDE3BQ13370 1112 aa20.74■□□□□ 0.91
ITGB4-208ENST00000582629 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
ITGB4-208ENST00000582629 PSDA5PKW4 1024 aaPredicted RBP20.73■□□□□ 0.91
ITGB4-208ENST00000582629 NLRP6P59044 892 aa20.73■□□□□ 0.91
ITGB4-208ENST00000582629 NEUROD1Q13562 356 aa20.73■□□□□ 0.91
ITGB4-208ENST00000582629 THRAP3Q9Y2W1 955 aaKnown RBP20.73■□□□□ 0.91
ITGB4-208ENST00000582629 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
ITGB4-208ENST00000582629 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
ITGB4-208ENST00000582629 TRIM37O94972 964 aa20.72■□□□□ 0.91
ITGB4-208ENST00000582629 CRB1P82279 1406 aa20.7■□□□□ 0.9
ITGB4-208ENST00000582629 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.9
ITGB4-208ENST00000582629 AATKQ6ZMQ8 1374 aa20.7■□□□□ 0.9
ITGB4-208ENST00000582629 ZBTB7CA1YPR0 619 aa20.69■□□□□ 0.9
ITGB4-208ENST00000582629 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
ITGB4-208ENST00000582629 PARD3Q8TEW0 1356 aa20.69■□□□□ 0.9
ITGB4-208ENST00000582629 COL18A1P39060 1754 aa20.68■□□□□ 0.9
ITGB4-208ENST00000582629 CAMKK2Q96RR4 588 aa20.68■□□□□ 0.9
ITGB4-208ENST00000582629 APBA3O96018 575 aa20.67■□□□□ 0.9
ITGB4-208ENST00000582629 RREB1Q92766 1687 aa20.67■□□□□ 0.9
ITGB4-208ENST00000582629 R3HDM1Q15032 1099 aaKnown RBP20.66■□□□□ 0.9
ITGB4-208ENST00000582629 TTC21BQ7Z4L5 1316 aa20.66■□□□□ 0.9
ITGB4-208ENST00000582629 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
ITGB4-208ENST00000582629 CPSF1Q10570 1443 aaKnown RBP20.64■□□□□ 0.89
ITGB4-208ENST00000582629 TTC21AQ8NDW8 1320 aa20.64■□□□□ 0.89
ITGB4-208ENST00000582629 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.89
ITGB4-208ENST00000582629 LRRC37A3O60309 1634 aa20.64■□□□□ 0.89
ITGB4-208ENST00000582629 SBNO2Q9Y2G9 1366 aa20.63■□□□□ 0.89
ITGB4-208ENST00000582629 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
ITGB4-208ENST00000582629 MON2Q7Z3U7 1717 aa20.63■□□□□ 0.89
ITGB4-208ENST00000582629 NUP188Q5SRE5 1749 aa20.62■□□□□ 0.89
ITGB4-208ENST00000582629 TOM1L2Q6ZVM7 507 aa20.62■□□□□ 0.89
ITGB4-208ENST00000582629 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms