RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 ATRNO75882 1429 aa17.65■□□□□ 0.42
SMARCD2-209ENST00000581832 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
SMARCD2-209ENST00000581832 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
SMARCD2-209ENST00000581832 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
SMARCD2-209ENST00000581832 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
SMARCD2-209ENST00000581832 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.64■□□□□ 0.41
SMARCD2-209ENST00000581832 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
SMARCD2-209ENST00000581832 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
SMARCD2-209ENST00000581832 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
SMARCD2-209ENST00000581832 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
SMARCD2-209ENST00000581832 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
SMARCD2-209ENST00000581832 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
SMARCD2-209ENST00000581832 TESK2Q96S53 571 aa17.6■□□□□ 0.41
SMARCD2-209ENST00000581832 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
SMARCD2-209ENST00000581832 PLCH1Q4KWH8 1693 aa17.6■□□□□ 0.41
SMARCD2-209ENST00000581832 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
SMARCD2-209ENST00000581832 RGS12O14924 1447 aa17.59■□□□□ 0.41
SMARCD2-209ENST00000581832 USP6P35125 1406 aa17.59■□□□□ 0.41
SMARCD2-209ENST00000581832 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-209ENST00000581832 AKAP12Q02952 1782 aa17.58■□□□□ 0.4
SMARCD2-209ENST00000581832 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.4
SMARCD2-209ENST00000581832 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
SMARCD2-209ENST00000581832 ST20-MTHFSA0A0A6YYL1 179 aa17.57■□□□□ 0.4
SMARCD2-209ENST00000581832 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-209ENST00000581832 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
SMARCD2-209ENST00000581832 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
SMARCD2-209ENST00000581832 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
SMARCD2-209ENST00000581832 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
SMARCD2-209ENST00000581832 EP400Q96L91 3159 aa17.56■□□□□ 0.4
SMARCD2-209ENST00000581832 USP19O94966 1318 aa17.55■□□□□ 0.4
SMARCD2-209ENST00000581832 GLI3P10071 1580 aa17.55■□□□□ 0.4
SMARCD2-209ENST00000581832 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
SMARCD2-209ENST00000581832 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
SMARCD2-209ENST00000581832 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
SMARCD2-209ENST00000581832 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
SMARCD2-209ENST00000581832 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
SMARCD2-209ENST00000581832 VPS72Q15906 364 aa17.53■□□□□ 0.4
SMARCD2-209ENST00000581832 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.39
SMARCD2-209ENST00000581832 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
SMARCD2-209ENST00000581832 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
SMARCD2-209ENST00000581832 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 USP47Q96K76 1375 aa17.51■□□□□ 0.39
SMARCD2-209ENST00000581832 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
SMARCD2-209ENST00000581832 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
SMARCD2-209ENST00000581832 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
SMARCD2-209ENST00000581832 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
SMARCD2-209ENST00000581832 CPDO75976 1380 aa17.5■□□□□ 0.39
SMARCD2-209ENST00000581832 SLIT3O75094 1523 aa17.49■□□□□ 0.39
SMARCD2-209ENST00000581832 GCP02774 474 aa17.49■□□□□ 0.39
SMARCD2-209ENST00000581832 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
SMARCD2-209ENST00000581832 NLRP6P59044 892 aa17.48■□□□□ 0.39
SMARCD2-209ENST00000581832 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
SMARCD2-209ENST00000581832 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
SMARCD2-209ENST00000581832 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
SMARCD2-209ENST00000581832 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
SMARCD2-209ENST00000581832 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
SMARCD2-209ENST00000581832 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
SMARCD2-209ENST00000581832 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
SMARCD2-209ENST00000581832 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
SMARCD2-209ENST00000581832 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
SMARCD2-209ENST00000581832 COL18A1P39060 1754 aa17.44■□□□□ 0.38
SMARCD2-209ENST00000581832 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
SMARCD2-209ENST00000581832 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
SMARCD2-209ENST00000581832 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
SMARCD2-209ENST00000581832 USP31Q70CQ4 1352 aa17.43■□□□□ 0.38
SMARCD2-209ENST00000581832 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
SMARCD2-209ENST00000581832 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
SMARCD2-209ENST00000581832 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
SMARCD2-209ENST00000581832 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
SMARCD2-209ENST00000581832 TMF1P82094 1093 aa17.41■□□□□ 0.38
SMARCD2-209ENST00000581832 SPATA31A1Q5TZJ5 1347 aa17.41■□□□□ 0.38
SMARCD2-209ENST00000581832 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 NME9Q86XW9 330 aa17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 CCDC9Q9Y3X0 531 aaKnown RBP17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 NFAT5O94916 1531 aa17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
SMARCD2-209ENST00000581832 FAM98CQ17RN3 349 aaKnown RBP17.39■□□□□ 0.37
SMARCD2-209ENST00000581832 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
SMARCD2-209ENST00000581832 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
SMARCD2-209ENST00000581832 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
SMARCD2-209ENST00000581832 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
SMARCD2-209ENST00000581832 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SMARCD2-209ENST00000581832 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
SMARCD2-209ENST00000581832 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SMARCD2-209ENST00000581832 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
SMARCD2-209ENST00000581832 EVA1CP58658 441 aa17.35■□□□□ 0.37
SMARCD2-209ENST00000581832 OVOS2A0A0J9YW53 1432 aa17.35■□□□□ 0.37
SMARCD2-209ENST00000581832 OVOS2Q6IE36 1432 aa17.35■□□□□ 0.37
SMARCD2-209ENST00000581832 MYOM1P52179 1685 aa17.35■□□□□ 0.37
SMARCD2-209ENST00000581832 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
SMARCD2-209ENST00000581832 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
SMARCD2-209ENST00000581832 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
SMARCD2-209ENST00000581832 SOX12O15370 315 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms