RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 BRINP3Q76B58 766 aa14.43□□□□□ -0.1
CCDC47-203ENST00000580986 ANKRD36BQ8N2N9 1353 aa14.43□□□□□ -0.1
CCDC47-203ENST00000580986 CD163L1Q9NR16 1453 aa14.43□□□□□ -0.1
CCDC47-203ENST00000580986 ZNF316A6NFI3 1004 aaPredicted RBP14.42□□□□□ -0.1
CCDC47-203ENST00000580986 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
CCDC47-203ENST00000580986 NRKQ7Z2Y5 1582 aa14.42□□□□□ -0.1
CCDC47-203ENST00000580986 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
CCDC47-203ENST00000580986 UBAP1LF5GYI3 381 aa14.41□□□□□ -0.1
CCDC47-203ENST00000580986 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
CCDC47-203ENST00000580986 ESCO1Q5FWF5 840 aa14.41□□□□□ -0.1
CCDC47-203ENST00000580986 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
CCDC47-203ENST00000580986 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
CCDC47-203ENST00000580986 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
CCDC47-203ENST00000580986 TERF2IPQ9NYB0 399 aa14.4□□□□□ -0.1
CCDC47-203ENST00000580986 CABP1Q9NZU7 370 aa14.4□□□□□ -0.1
CCDC47-203ENST00000580986 USP6P35125 1406 aa14.4□□□□□ -0.1
CCDC47-203ENST00000580986 PXDNQ92626 1479 aa14.39□□□□□ -0.11
CCDC47-203ENST00000580986 A0A1W2PP64 1363 aa14.39□□□□□ -0.11
CCDC47-203ENST00000580986 TRPM3Q9HCF6 1732 aaPredicted RBP14.39□□□□□ -0.11
CCDC47-203ENST00000580986 NUTM2FA1L443 756 aa14.39□□□□□ -0.11
CCDC47-203ENST00000580986 EDC4Q6P2E9 1401 aaKnown RBP14.39□□□□□ -0.11
CCDC47-203ENST00000580986 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
CCDC47-203ENST00000580986 ACEP12821 1306 aa14.39□□□□□ -0.11
CCDC47-203ENST00000580986 SLC12A5Q9H2X9 1139 aa14.38□□□□□ -0.11
CCDC47-203ENST00000580986 SOS2Q07890 1332 aaPredicted RBP14.38□□□□□ -0.11
CCDC47-203ENST00000580986 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
CCDC47-203ENST00000580986 HDGFL2Q7Z4V5 671 aaPredicted RBP14.37□□□□□ -0.11
CCDC47-203ENST00000580986 COL16A1Q07092 1604 aaPredicted RBP14.37□□□□□ -0.11
CCDC47-203ENST00000580986 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
CCDC47-203ENST00000580986 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
CCDC47-203ENST00000580986 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
CCDC47-203ENST00000580986 ALS2Q96Q42 1657 aa14.36□□□□□ -0.11
CCDC47-203ENST00000580986 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
CCDC47-203ENST00000580986 FOXO3O43524 673 aa14.35□□□□□ -0.11
CCDC47-203ENST00000580986 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
CCDC47-203ENST00000580986 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
CCDC47-203ENST00000580986 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
CCDC47-203ENST00000580986 PSME1Q06323 249 aa14.34□□□□□ -0.11
CCDC47-203ENST00000580986 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
CCDC47-203ENST00000580986 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.12
CCDC47-203ENST00000580986 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
CCDC47-203ENST00000580986 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
CCDC47-203ENST00000580986 COL22A1Q8NFW1 1626 aaPredicted RBP14.32□□□□□ -0.12
CCDC47-203ENST00000580986 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
CCDC47-203ENST00000580986 NSD2O96028 1365 aa14.32□□□□□ -0.12
CCDC47-203ENST00000580986 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
CCDC47-203ENST00000580986 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCDC47-203ENST00000580986 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 KRT28Q7Z3Y7 464 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 PANK3Q9H999 370 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
CCDC47-203ENST00000580986 SHPRHQ149N8 1683 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 ANKRD26Q9UPS8 1709 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 CARD14Q9BXL6 1004 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 SPATA31A3Q5VYP0 1347 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
CCDC47-203ENST00000580986 HAX1O00165 279 aa14.29□□□□□ -0.12
CCDC47-203ENST00000580986 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
CCDC47-203ENST00000580986 CGNL1Q0VF96 1302 aa14.29□□□□□ -0.12
CCDC47-203ENST00000580986 CRYBG1Q9Y4K1 1723 aa14.29□□□□□ -0.12
CCDC47-203ENST00000580986 OVOS2A0A0J9YW53 1432 aa14.28□□□□□ -0.12
CCDC47-203ENST00000580986 OVOS2Q6IE36 1432 aa14.28□□□□□ -0.12
CCDC47-203ENST00000580986 MARF1Q9Y4F3 1742 aaKnown RBP14.27□□□□□ -0.12
CCDC47-203ENST00000580986 KNSTRNQ9Y448 316 aa14.27□□□□□ -0.13
CCDC47-203ENST00000580986 SLIT3O75094 1523 aa14.26□□□□□ -0.13
CCDC47-203ENST00000580986 DDX17Q92841 729 aaKnown RBP14.26□□□□□ -0.13
CCDC47-203ENST00000580986 JCADQ9P266 1359 aa14.25□□□□□ -0.13
CCDC47-203ENST00000580986 USP19O94966 1318 aa14.25□□□□□ -0.13
CCDC47-203ENST00000580986 ABCA3Q99758 1704 aa14.25□□□□□ -0.13
CCDC47-203ENST00000580986 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
CCDC47-203ENST00000580986 AMER1Q5JTC6 1135 aaPredicted RBP14.25□□□□□ -0.13
CCDC47-203ENST00000580986 PHRF1Q9P1Y6 1649 aaKnown RBP14.25□□□□□ -0.13
CCDC47-203ENST00000580986 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
CCDC47-203ENST00000580986 FYB1O15117 783 aa14.24□□□□□ -0.13
CCDC47-203ENST00000580986 XPCQ01831 940 aaPredicted RBP14.24□□□□□ -0.13
CCDC47-203ENST00000580986 NLRP13Q86W25 1043 aa14.24□□□□□ -0.13
CCDC47-203ENST00000580986 ABTB2Q8N961 1025 aa14.23□□□□□ -0.13
CCDC47-203ENST00000580986 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
CCDC47-203ENST00000580986 HSPA1LP34931 641 aa14.22□□□□□ -0.13
CCDC47-203ENST00000580986 ABCC6O95255 1503 aa14.21□□□□□ -0.13
CCDC47-203ENST00000580986 SPATA31A6Q5VVP1 1343 aa14.21□□□□□ -0.13
CCDC47-203ENST00000580986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC47-203ENST00000580986 NFAT5O94916 1531 aa14.2□□□□□ -0.14
CCDC47-203ENST00000580986 NME9Q86XW9 330 aa14.2□□□□□ -0.14
CCDC47-203ENST00000580986 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
CCDC47-203ENST00000580986 COG3Q96JB2 828 aa14.2□□□□□ -0.14
CCDC47-203ENST00000580986 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
CCDC47-203ENST00000580986 NLRP6P59044 892 aa14.19□□□□□ -0.14
CCDC47-203ENST00000580986 KIF24Q5T7B8 1368 aa14.19□□□□□ -0.14
CCDC47-203ENST00000580986 CPDO75976 1380 aa14.18□□□□□ -0.14
CCDC47-203ENST00000580986 PARD3Q8TEW0 1356 aa14.18□□□□□ -0.14
CCDC47-203ENST00000580986 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
CCDC47-203ENST00000580986 SMG6Q86US8 1419 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms