RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
PSMD3-205ENST00000580980 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
PSMD3-205ENST00000580980 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
PSMD3-205ENST00000580980 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
PSMD3-205ENST00000580980 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
PSMD3-205ENST00000580980 ABCA3Q99758 1704 aa17.33■□□□□ 0.37
PSMD3-205ENST00000580980 BRD4O60885 1362 aaPredicted RBP17.33■□□□□ 0.36
PSMD3-205ENST00000580980 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
PSMD3-205ENST00000580980 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
PSMD3-205ENST00000580980 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
PSMD3-205ENST00000580980 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
PSMD3-205ENST00000580980 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
PSMD3-205ENST00000580980 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSMD3-205ENST00000580980 SBNO2Q9Y2G9 1366 aa17.31■□□□□ 0.36
PSMD3-205ENST00000580980 VPS72Q15906 364 aa17.31■□□□□ 0.36
PSMD3-205ENST00000580980 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
PSMD3-205ENST00000580980 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
PSMD3-205ENST00000580980 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
PSMD3-205ENST00000580980 ATAD2Q6PL18 1390 aa17.28■□□□□ 0.36
PSMD3-205ENST00000580980 PLCH1Q4KWH8 1693 aa17.27■□□□□ 0.36
PSMD3-205ENST00000580980 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
PSMD3-205ENST00000580980 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.35
PSMD3-205ENST00000580980 COL14A1Q05707 1796 aaKnown RBP17.26■□□□□ 0.35
PSMD3-205ENST00000580980 NLRP13Q86W25 1043 aa17.26■□□□□ 0.35
PSMD3-205ENST00000580980 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
PSMD3-205ENST00000580980 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
PSMD3-205ENST00000580980 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
PSMD3-205ENST00000580980 GLI3P10071 1580 aa17.25■□□□□ 0.35
PSMD3-205ENST00000580980 USP6P35125 1406 aa17.25■□□□□ 0.35
PSMD3-205ENST00000580980 ONECUT3O60422 494 aaPredicted RBP17.25■□□□□ 0.35
PSMD3-205ENST00000580980 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
PSMD3-205ENST00000580980 USP19O94966 1318 aa17.24■□□□□ 0.35
PSMD3-205ENST00000580980 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
PSMD3-205ENST00000580980 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
PSMD3-205ENST00000580980 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
PSMD3-205ENST00000580980 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
PSMD3-205ENST00000580980 KIAA0232Q92628 1395 aa17.23■□□□□ 0.35
PSMD3-205ENST00000580980 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
PSMD3-205ENST00000580980 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
PSMD3-205ENST00000580980 CPDO75976 1380 aa17.21■□□□□ 0.35
PSMD3-205ENST00000580980 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
PSMD3-205ENST00000580980 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
PSMD3-205ENST00000580980 GCP02774 474 aa17.2■□□□□ 0.34
PSMD3-205ENST00000580980 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
PSMD3-205ENST00000580980 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
PSMD3-205ENST00000580980 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
PSMD3-205ENST00000580980 NLRP6P59044 892 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
PSMD3-205ENST00000580980 CHRNA2Q15822 529 aa17.18■□□□□ 0.34
PSMD3-205ENST00000580980 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
PSMD3-205ENST00000580980 TESK2Q96S53 571 aa17.17■□□□□ 0.34
PSMD3-205ENST00000580980 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
PSMD3-205ENST00000580980 SLIT3O75094 1523 aa17.16■□□□□ 0.34
PSMD3-205ENST00000580980 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
PSMD3-205ENST00000580980 EVA1CP58658 441 aa17.15■□□□□ 0.34
PSMD3-205ENST00000580980 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
PSMD3-205ENST00000580980 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
PSMD3-205ENST00000580980 KRT27Q7Z3Y8 459 aa17.14■□□□□ 0.33
PSMD3-205ENST00000580980 HDGFL2Q7Z4V5 671 aaPredicted RBP17.14■□□□□ 0.33
PSMD3-205ENST00000580980 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
PSMD3-205ENST00000580980 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
PSMD3-205ENST00000580980 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
PSMD3-205ENST00000580980 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
PSMD3-205ENST00000580980 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
PSMD3-205ENST00000580980 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
PSMD3-205ENST00000580980 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
PSMD3-205ENST00000580980 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 A0A0G2JS52 829 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 MYT1Q01538 1121 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 USP47Q96K76 1375 aa17.12■□□□□ 0.33
PSMD3-205ENST00000580980 USP31Q70CQ4 1352 aa17.11■□□□□ 0.33
PSMD3-205ENST00000580980 TMF1P82094 1093 aa17.1■□□□□ 0.33
PSMD3-205ENST00000580980 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
PSMD3-205ENST00000580980 BLMP54132 1417 aaPredicted RBP17.1■□□□□ 0.33
PSMD3-205ENST00000580980 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
PSMD3-205ENST00000580980 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
PSMD3-205ENST00000580980 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
PSMD3-205ENST00000580980 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
PSMD3-205ENST00000580980 THRAP3Q9Y2W1 955 aaKnown RBP17.09■□□□□ 0.33
PSMD3-205ENST00000580980 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
PSMD3-205ENST00000580980 THSD7AQ9UPZ6 1657 aa17.08■□□□□ 0.32
PSMD3-205ENST00000580980 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
PSMD3-205ENST00000580980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.32
PSMD3-205ENST00000580980 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
PSMD3-205ENST00000580980 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
PSMD3-205ENST00000580980 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
PSMD3-205ENST00000580980 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
PSMD3-205ENST00000580980 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
PSMD3-205ENST00000580980 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
PSMD3-205ENST00000580980 CRB1P82279 1406 aa17.05■□□□□ 0.32
PSMD3-205ENST00000580980 NME9Q86XW9 330 aa17.05■□□□□ 0.32
PSMD3-205ENST00000580980 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
PSMD3-205ENST00000580980 NFAT5O94916 1531 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms