RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 SLIT2O94813 1529 aa24.64■■□□□ 1.53
EIF4A1-216ENST00000580888 ARHGEF10O15013 1369 aa24.63■■□□□ 1.53
EIF4A1-216ENST00000580888 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
EIF4A1-216ENST00000580888 NWD2Q9ULI1 1742 aa24.62■■□□□ 1.53
EIF4A1-216ENST00000580888 WASLO00401 505 aaPredicted RBP24.62■■□□□ 1.53
EIF4A1-216ENST00000580888 TESK2Q96S53 571 aa24.62■■□□□ 1.53
EIF4A1-216ENST00000580888 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
EIF4A1-216ENST00000580888 PLCH1Q4KWH8 1693 aa24.59■■□□□ 1.53
EIF4A1-216ENST00000580888 PMFBP1Q8TBY8 1022 aa24.59■■□□□ 1.53
EIF4A1-216ENST00000580888 ATP7BP35670 1465 aa24.58■■□□□ 1.52
EIF4A1-216ENST00000580888 TOPAZ1Q8N9V7 1692 aa24.57■■□□□ 1.52
EIF4A1-216ENST00000580888 CRYBG1Q9Y4K1 1723 aa24.57■■□□□ 1.52
EIF4A1-216ENST00000580888 GLI3P10071 1580 aa24.55■■□□□ 1.52
EIF4A1-216ENST00000580888 CENPBP07199 599 aaPredicted RBP24.55■■□□□ 1.52
EIF4A1-216ENST00000580888 UNC5CLQ8IV45 518 aa24.55■■□□□ 1.52
EIF4A1-216ENST00000580888 GJD4Q96KN9 370 aaPredicted RBP24.54■■□□□ 1.52
EIF4A1-216ENST00000580888 ATAD2Q6PL18 1390 aa24.54■■□□□ 1.52
EIF4A1-216ENST00000580888 CABLES1Q8TDN4 633 aa24.52■■□□□ 1.52
EIF4A1-216ENST00000580888 NRAPQ86VF7 1730 aa24.5■■□□□ 1.51
EIF4A1-216ENST00000580888 EP400Q96L91 3159 aa24.5■■□□□ 1.51
EIF4A1-216ENST00000580888 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
EIF4A1-216ENST00000580888 NUDT16Q96DE0 195 aaKnown RBP24.49■■□□□ 1.51
EIF4A1-216ENST00000580888 COL14A1Q05707 1796 aaKnown RBP24.49■■□□□ 1.51
EIF4A1-216ENST00000580888 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
EIF4A1-216ENST00000580888 BRWD3Q6RI45 1802 aa24.48■■□□□ 1.51
EIF4A1-216ENST00000580888 PRKRIP1Q9H875 184 aaPredicted RBP24.48■■□□□ 1.51
EIF4A1-216ENST00000580888 NGDNQ8NEJ9 315 aaKnown RBP24.47■■□□□ 1.51
EIF4A1-216ENST00000580888 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
EIF4A1-216ENST00000580888 QRICH2Q9H0J4 1663 aa24.46■■□□□ 1.51
EIF4A1-216ENST00000580888 POLR3AO14802 1390 aaPredicted RBP24.46■■□□□ 1.51
EIF4A1-216ENST00000580888 TMF1P82094 1093 aa24.46■■□□□ 1.51
EIF4A1-216ENST00000580888 VPS72Q15906 364 aa24.46■■□□□ 1.51
EIF4A1-216ENST00000580888 SBNO2Q9Y2G9 1366 aa24.45■■□□□ 1.5
EIF4A1-216ENST00000580888 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
EIF4A1-216ENST00000580888 PHRF1Q9P1Y6 1649 aaKnown RBP24.44■■□□□ 1.5
EIF4A1-216ENST00000580888 FAM83GA6ND36 823 aa24.43■■□□□ 1.5
EIF4A1-216ENST00000580888 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
EIF4A1-216ENST00000580888 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
EIF4A1-216ENST00000580888 CCDC61Q9Y6R9 512 aa24.42■■□□□ 1.5
EIF4A1-216ENST00000580888 CENPJQ9HC77 1338 aaPredicted RBP24.41■■□□□ 1.5
EIF4A1-216ENST00000580888 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
EIF4A1-216ENST00000580888 PLEKHG5O94827 1062 aa24.38■■□□□ 1.49
EIF4A1-216ENST00000580888 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
EIF4A1-216ENST00000580888 ACEP12821 1306 aa24.37■■□□□ 1.49
EIF4A1-216ENST00000580888 PER1O15534 1290 aaPredicted RBP24.37■■□□□ 1.49
EIF4A1-216ENST00000580888 PAK3O75914 559 aaPredicted RBP24.37■■□□□ 1.49
EIF4A1-216ENST00000580888 CDCA8Q53HL2 280 aa24.37■■□□□ 1.49
EIF4A1-216ENST00000580888 KTN1Q86UP2 1357 aaKnown RBP24.37■■□□□ 1.49
EIF4A1-216ENST00000580888 POLR3GLQ9BT43 218 aa24.35■■□□□ 1.49
EIF4A1-216ENST00000580888 BTG4Q9NY30 223 aa24.34■■□□□ 1.49
EIF4A1-216ENST00000580888 PPIP5K1Q6PFW1 1433 aa24.34■■□□□ 1.49
EIF4A1-216ENST00000580888 BRD4O60885 1362 aaPredicted RBP24.33■■□□□ 1.49
EIF4A1-216ENST00000580888 SEPT12Q8IYM1 358 aa24.33■■□□□ 1.49
EIF4A1-216ENST00000580888 NRKQ7Z2Y5 1582 aa24.32■■□□□ 1.48
EIF4A1-216ENST00000580888 SRPK2P78362 688 aaKnown RBP24.3■■□□□ 1.48
EIF4A1-216ENST00000580888 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
EIF4A1-216ENST00000580888 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
EIF4A1-216ENST00000580888 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
EIF4A1-216ENST00000580888 THSD7AQ9UPZ6 1657 aa24.29■■□□□ 1.48
EIF4A1-216ENST00000580888 KIAA0232Q92628 1395 aa24.29■■□□□ 1.48
EIF4A1-216ENST00000580888 MYOM1P52179 1685 aa24.28■■□□□ 1.48
EIF4A1-216ENST00000580888 PRDM11Q9NQV5 511 aa24.28■■□□□ 1.48
EIF4A1-216ENST00000580888 USP19O94966 1318 aa24.28■■□□□ 1.48
EIF4A1-216ENST00000580888 SPATA31A5Q5VU36 1347 aa24.28■■□□□ 1.48
EIF4A1-216ENST00000580888 SPATA31A7Q8IWB4 1347 aa24.28■■□□□ 1.48
EIF4A1-216ENST00000580888 PUS7Q96PZ0 661 aaKnown RBP24.27■■□□□ 1.48
EIF4A1-216ENST00000580888 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
EIF4A1-216ENST00000580888 RALBP1Q15311 655 aa24.26■■□□□ 1.47
EIF4A1-216ENST00000580888 AKAP12Q02952 1782 aa24.26■■□□□ 1.47
EIF4A1-216ENST00000580888 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
EIF4A1-216ENST00000580888 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
EIF4A1-216ENST00000580888 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
EIF4A1-216ENST00000580888 CPDO75976 1380 aa24.25■■□□□ 1.47
EIF4A1-216ENST00000580888 ABTB2Q8N961 1025 aa24.24■■□□□ 1.47
EIF4A1-216ENST00000580888 PANK3Q9H999 370 aa24.24■■□□□ 1.47
EIF4A1-216ENST00000580888 PARD3Q8TEW0 1356 aa24.24■■□□□ 1.47
EIF4A1-216ENST00000580888 USP6P35125 1406 aa24.24■■□□□ 1.47
EIF4A1-216ENST00000580888 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
EIF4A1-216ENST00000580888 FAM98CQ17RN3 349 aaKnown RBP24.22■■□□□ 1.47
EIF4A1-216ENST00000580888 NUTM2GQ5VZR2 741 aa24.22■■□□□ 1.47
EIF4A1-216ENST00000580888 CABP1Q9NZU7 370 aa24.21■■□□□ 1.47
EIF4A1-216ENST00000580888 PIK3C2AO00443 1686 aa24.21■■□□□ 1.47
EIF4A1-216ENST00000580888 SLIT3O75094 1523 aa24.2■■□□□ 1.47
EIF4A1-216ENST00000580888 SPATA31A1Q5TZJ5 1347 aa24.2■■□□□ 1.46
EIF4A1-216ENST00000580888 ZC3H6P61129 1189 aaKnown RBP24.2■■□□□ 1.46
EIF4A1-216ENST00000580888 NLRP13Q86W25 1043 aa24.2■■□□□ 1.46
EIF4A1-216ENST00000580888 CAMTA1Q9Y6Y1 1673 aa24.2■■□□□ 1.46
EIF4A1-216ENST00000580888 NPC1L1Q9UHC9 1359 aa24.19■■□□□ 1.46
EIF4A1-216ENST00000580888 RGPD1P0DJD0 1748 aa24.19■■□□□ 1.46
EIF4A1-216ENST00000580888 CHRNA2Q15822 529 aa24.19■■□□□ 1.46
EIF4A1-216ENST00000580888 MYBBP1AQ9BQG0 1328 aaKnown RBP24.17■■□□□ 1.46
EIF4A1-216ENST00000580888 MRS2Q9HD23 443 aa24.17■■□□□ 1.46
EIF4A1-216ENST00000580888 GCP02774 474 aa24.16■■□□□ 1.46
EIF4A1-216ENST00000580888 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
EIF4A1-216ENST00000580888 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
EIF4A1-216ENST00000580888 COL18A1P39060 1754 aa24.14■■□□□ 1.46
EIF4A1-216ENST00000580888 A0A0G2JS52 829 aa24.14■■□□□ 1.45
EIF4A1-216ENST00000580888 MYT1Q01538 1121 aa24.14■■□□□ 1.45
EIF4A1-216ENST00000580888 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
EIF4A1-216ENST00000580888 SF3B2Q13435 895 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms