RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
ERBB2-210ENST00000580074 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
ERBB2-210ENST00000580074 POLR3AO14802 1390 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-210ENST00000580074 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
ERBB2-210ENST00000580074 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
ERBB2-210ENST00000580074 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
ERBB2-210ENST00000580074 PPIP5K1Q6PFW1 1433 aa16.66■□□□□ 0.26
ERBB2-210ENST00000580074 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
ERBB2-210ENST00000580074 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
ERBB2-210ENST00000580074 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
ERBB2-210ENST00000580074 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
ERBB2-210ENST00000580074 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
ERBB2-210ENST00000580074 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
ERBB2-210ENST00000580074 VPS72Q15906 364 aa16.65■□□□□ 0.26
ERBB2-210ENST00000580074 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
ERBB2-210ENST00000580074 ACEP12821 1306 aa16.64■□□□□ 0.25
ERBB2-210ENST00000580074 GLI3P10071 1580 aa16.64■□□□□ 0.25
ERBB2-210ENST00000580074 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
ERBB2-210ENST00000580074 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
ERBB2-210ENST00000580074 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
ERBB2-210ENST00000580074 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
ERBB2-210ENST00000580074 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
ERBB2-210ENST00000580074 SBNO2Q9Y2G9 1366 aa16.61■□□□□ 0.25
ERBB2-210ENST00000580074 A0A0G2JS52 829 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 MYT1Q01538 1121 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 ABTB2Q8N961 1025 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 CABP2Q9NPB3 220 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
ERBB2-210ENST00000580074 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
ERBB2-210ENST00000580074 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
ERBB2-210ENST00000580074 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
ERBB2-210ENST00000580074 USP6P35125 1406 aa16.57■□□□□ 0.24
ERBB2-210ENST00000580074 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
ERBB2-210ENST00000580074 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
ERBB2-210ENST00000580074 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
ERBB2-210ENST00000580074 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
ERBB2-210ENST00000580074 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-210ENST00000580074 USP19O94966 1318 aa16.54■□□□□ 0.24
ERBB2-210ENST00000580074 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
ERBB2-210ENST00000580074 CPDO75976 1380 aa16.53■□□□□ 0.24
ERBB2-210ENST00000580074 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
ERBB2-210ENST00000580074 BRWD3Q6RI45 1802 aa16.53■□□□□ 0.24
ERBB2-210ENST00000580074 AKAP12Q02952 1782 aa16.53■□□□□ 0.24
ERBB2-210ENST00000580074 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.24
ERBB2-210ENST00000580074 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.24
ERBB2-210ENST00000580074 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.24
ERBB2-210ENST00000580074 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
ERBB2-210ENST00000580074 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
ERBB2-210ENST00000580074 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
ERBB2-210ENST00000580074 TTC21AQ8NDW8 1320 aa16.51■□□□□ 0.23
ERBB2-210ENST00000580074 EVA1CP58658 441 aa16.51■□□□□ 0.23
ERBB2-210ENST00000580074 ZC3H6P61129 1189 aaKnown RBP16.51■□□□□ 0.23
ERBB2-210ENST00000580074 NLRP6P59044 892 aa16.5■□□□□ 0.23
ERBB2-210ENST00000580074 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
ERBB2-210ENST00000580074 SLIT3O75094 1523 aa16.5■□□□□ 0.23
ERBB2-210ENST00000580074 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
ERBB2-210ENST00000580074 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
ERBB2-210ENST00000580074 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
ERBB2-210ENST00000580074 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
ERBB2-210ENST00000580074 MON2Q7Z3U7 1717 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 GCP02774 474 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 CHRNA2Q15822 529 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 KCNH5Q8NCM2 988 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
ERBB2-210ENST00000580074 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
ERBB2-210ENST00000580074 HDGFL2Q7Z4V5 671 aaPredicted RBP16.47■□□□□ 0.23
ERBB2-210ENST00000580074 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
ERBB2-210ENST00000580074 SPATA31A1Q5TZJ5 1347 aa16.46■□□□□ 0.23
ERBB2-210ENST00000580074 RGPD1P0DJD0 1748 aa16.46■□□□□ 0.23
ERBB2-210ENST00000580074 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
ERBB2-210ENST00000580074 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
ERBB2-210ENST00000580074 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
ERBB2-210ENST00000580074 ABCC6O95255 1503 aa16.45■□□□□ 0.22
ERBB2-210ENST00000580074 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
ERBB2-210ENST00000580074 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
ERBB2-210ENST00000580074 BAG6P46379 1132 aa16.44■□□□□ 0.22
ERBB2-210ENST00000580074 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
ERBB2-210ENST00000580074 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
ERBB2-210ENST00000580074 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-210ENST00000580074 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
ERBB2-210ENST00000580074 C11orf95C9JLR9 678 aaPredicted RBP16.43■□□□□ 0.22
ERBB2-210ENST00000580074 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
ERBB2-210ENST00000580074 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
ERBB2-210ENST00000580074 CRB1P82279 1406 aa16.43■□□□□ 0.22
ERBB2-210ENST00000580074 TCP11L2Q8N4U5 519 aa16.42■□□□□ 0.22
ERBB2-210ENST00000580074 TESK2Q96S53 571 aa16.42■□□□□ 0.22
ERBB2-210ENST00000580074 USP54Q70EL1 1684 aa16.42■□□□□ 0.22
ERBB2-210ENST00000580074 EDC4Q6P2E9 1401 aaKnown RBP16.42■□□□□ 0.22
ERBB2-210ENST00000580074 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
ERBB2-210ENST00000580074 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
ERBB2-210ENST00000580074 CDCA8Q53HL2 280 aa16.39■□□□□ 0.21
ERBB2-210ENST00000580074 FAM196AQ6ZSG2 479 aa16.39■□□□□ 0.21
ERBB2-210ENST00000580074 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
ERBB2-210ENST00000580074 USP47Q96K76 1375 aa16.38■□□□□ 0.21
ERBB2-210ENST00000580074 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
ERBB2-210ENST00000580074 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
ERBB2-210ENST00000580074 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
ERBB2-210ENST00000580074 TMF1P82094 1093 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms