RNA–Protein interactions for RNA: ENST00000579495.1

RPL17-206, Transcript of ribosomal protein L17, humanhuman

TSL 2

Gene RPL17, Length 914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-206ENST00000579495 CDK19Q9BWU1 502 aa28.41■■■□□ 2.14
RPL17-206ENST00000579495 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
RPL17-206ENST00000579495 FAM98CQ17RN3 349 aaKnown RBP28.4■■■□□ 2.14
RPL17-206ENST00000579495 DEFB132Q7Z7B7 95 aa28.39■■■□□ 2.14
RPL17-206ENST00000579495 ALS2Q96Q42 1657 aa28.38■■■□□ 2.13
RPL17-206ENST00000579495 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
RPL17-206ENST00000579495 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
RPL17-206ENST00000579495 NBPF1Q3BBV0 1214 aa28.34■■■□□ 2.13
RPL17-206ENST00000579495 NUTM2GQ5VZR2 741 aa28.34■■■□□ 2.13
RPL17-206ENST00000579495 ATP7BP35670 1465 aa28.34■■■□□ 2.13
RPL17-206ENST00000579495 COL14A1Q05707 1796 aaKnown RBP28.33■■■□□ 2.13
RPL17-206ENST00000579495 CCDC61Q9Y6R9 512 aa28.32■■■□□ 2.12
RPL17-206ENST00000579495 ACEP12821 1306 aa28.31■■■□□ 2.12
RPL17-206ENST00000579495 ITSN1Q15811 1721 aa28.31■■■□□ 2.12
RPL17-206ENST00000579495 NRAPQ86VF7 1730 aa28.3■■■□□ 2.12
RPL17-206ENST00000579495 CHRNA2Q15822 529 aa28.3■■■□□ 2.12
RPL17-206ENST00000579495 NBPF8Q3BBV2 869 aa28.3■■■□□ 2.12
RPL17-206ENST00000579495 SPATA31A5Q5VU36 1347 aa28.29■■■□□ 2.12
RPL17-206ENST00000579495 SPATA31A7Q8IWB4 1347 aa28.29■■■□□ 2.12
RPL17-206ENST00000579495 ZC3H6P61129 1189 aaKnown RBP28.29■■■□□ 2.12
RPL17-206ENST00000579495 KIAA0232Q92628 1395 aa28.27■■■□□ 2.12
RPL17-206ENST00000579495 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
RPL17-206ENST00000579495 STRN4Q9NRL3 753 aa28.27■■■□□ 2.12
RPL17-206ENST00000579495 SRCAPQ6ZRS2 3230 aa28.27■■■□□ 2.12
RPL17-206ENST00000579495 FAM182BQ5T319 152 aa28.26■■■□□ 2.11
RPL17-206ENST00000579495 PLEKHG3A1L390 1219 aa28.25■■■□□ 2.11
RPL17-206ENST00000579495 KIAA1210Q9ULL0 1709 aa28.25■■■□□ 2.11
RPL17-206ENST00000579495 BAG6P46379 1132 aa28.24■■■□□ 2.11
RPL17-206ENST00000579495 ABTB2Q8N961 1025 aa28.24■■■□□ 2.11
RPL17-206ENST00000579495 POLR3AO14802 1390 aaPredicted RBP28.24■■■□□ 2.11
RPL17-206ENST00000579495 CRYBG1Q9Y4K1 1723 aa28.23■■■□□ 2.11
RPL17-206ENST00000579495 CENPJQ9HC77 1338 aaPredicted RBP28.22■■■□□ 2.11
RPL17-206ENST00000579495 EVA1CP58658 441 aa28.22■■■□□ 2.11
RPL17-206ENST00000579495 CABP2Q9NPB3 220 aa28.22■■■□□ 2.11
RPL17-206ENST00000579495 USP35Q9P2H5 1018 aa28.2■■■□□ 2.1
RPL17-206ENST00000579495 SPATA31A1Q5TZJ5 1347 aa28.19■■■□□ 2.1
RPL17-206ENST00000579495 TOPAZ1Q8N9V7 1692 aa28.17■■■□□ 2.1
RPL17-206ENST00000579495 L3MBTL2Q969R5 705 aa28.17■■■□□ 2.1
RPL17-206ENST00000579495 PHRF1Q9P1Y6 1649 aaKnown RBP28.17■■■□□ 2.1
RPL17-206ENST00000579495 PPIP5K1Q6PFW1 1433 aa28.17■■■□□ 2.1
RPL17-206ENST00000579495 EN1Q05925 392 aaPredicted RBP28.15■■■□□ 2.1
RPL17-206ENST00000579495 NLRP13Q86W25 1043 aa28.15■■■□□ 2.1
RPL17-206ENST00000579495 SIN3AQ96ST3 1273 aa28.14■■■□□ 2.1
RPL17-206ENST00000579495 PSDA5PKW4 1024 aaPredicted RBP28.13■■■□□ 2.09
RPL17-206ENST00000579495 NEUROD1Q13562 356 aa28.13■■■□□ 2.09
RPL17-206ENST00000579495 CABP1Q9NZU7 370 aa28.12■■■□□ 2.09
RPL17-206ENST00000579495 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
RPL17-206ENST00000579495 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
RPL17-206ENST00000579495 GCP02774 474 aa28.1■■■□□ 2.09
RPL17-206ENST00000579495 LARP1Q6PKG0 1096 aaKnown RBP28.1■■■□□ 2.09
RPL17-206ENST00000579495 USP19O94966 1318 aa28.09■■■□□ 2.09
RPL17-206ENST00000579495 SSH2Q76I76 1423 aa28.09■■■□□ 2.09
RPL17-206ENST00000579495 TRIM37O94972 964 aa28.08■■■□□ 2.09
RPL17-206ENST00000579495 PDE3BQ13370 1112 aa28.08■■■□□ 2.09
RPL17-206ENST00000579495 FAM196AQ6ZSG2 479 aa28.08■■■□□ 2.09
RPL17-206ENST00000579495 NLRP6P59044 892 aa28.07■■■□□ 2.08
RPL17-206ENST00000579495 QRICH2Q9H0J4 1663 aa28.07■■■□□ 2.08
RPL17-206ENST00000579495 RGPD1P0DJD0 1748 aa28.06■■■□□ 2.08
RPL17-206ENST00000579495 BARGINQ6ZT62 677 aa28.06■■■□□ 2.08
RPL17-206ENST00000579495 CPDO75976 1380 aa28.06■■■□□ 2.08
RPL17-206ENST00000579495 NRKQ7Z2Y5 1582 aa28.06■■■□□ 2.08
RPL17-206ENST00000579495 CAMTA1Q9Y6Y1 1673 aa28.06■■■□□ 2.08
RPL17-206ENST00000579495 EVC2Q86UK5 1308 aa28.05■■■□□ 2.08
RPL17-206ENST00000579495 TCP11L2Q8N4U5 519 aa28.05■■■□□ 2.08
RPL17-206ENST00000579495 EZH2Q15910 746 aaKnown RBP28.04■■■□□ 2.08
RPL17-206ENST00000579495 BRD4O60885 1362 aaPredicted RBP28.02■■■□□ 2.08
RPL17-206ENST00000579495 APBA3O96018 575 aa28.02■■■□□ 2.08
RPL17-206ENST00000579495 R3HDM1Q15032 1099 aaKnown RBP28.01■■■□□ 2.07
RPL17-206ENST00000579495 USP6P35125 1406 aa28.01■■■□□ 2.07
RPL17-206ENST00000579495 ROCK2O75116 1388 aaKnown RBP28■■■□□ 2.07
RPL17-206ENST00000579495 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
RPL17-206ENST00000579495 CAMKK2Q96RR4 588 aa27.97■■■□□ 2.07
RPL17-206ENST00000579495 LMO7Q8WWI1 1683 aa27.97■■■□□ 2.07
RPL17-206ENST00000579495 DISP2A7MBM2 1401 aa27.96■■■□□ 2.07
RPL17-206ENST00000579495 TRPM1Q7Z4N2 1603 aa27.96■■■□□ 2.07
RPL17-206ENST00000579495 TNS1Q9HBL0 1735 aaKnown RBP27.95■■■□□ 2.07
RPL17-206ENST00000579495 ZNF692Q9BU19 519 aaPredicted RBP27.95■■■□□ 2.06
RPL17-206ENST00000579495 COL5A2P05997 1499 aaPredicted RBP27.94■■■□□ 2.06
RPL17-206ENST00000579495 AATKQ6ZMQ8 1374 aa27.92■■■□□ 2.06
RPL17-206ENST00000579495 SOX12O15370 315 aa27.92■■■□□ 2.06
RPL17-206ENST00000579495 TOM1L2Q6ZVM7 507 aa27.92■■■□□ 2.06
RPL17-206ENST00000579495 CRB1P82279 1406 aa27.92■■■□□ 2.06
RPL17-206ENST00000579495 TTC21BQ7Z4L5 1316 aa27.91■■■□□ 2.06
RPL17-206ENST00000579495 LRP5O75197 1615 aa27.9■■■□□ 2.06
RPL17-206ENST00000579495 SLIT3O75094 1523 aa27.88■■■□□ 2.05
RPL17-206ENST00000579495 AXIN2Q9Y2T1 843 aa27.88■■■□□ 2.05
RPL17-206ENST00000579495 KCNH5Q8NCM2 988 aa27.87■■■□□ 2.05
RPL17-206ENST00000579495 PARD3Q8TEW0 1356 aa27.86■■■□□ 2.05
RPL17-206ENST00000579495 PIK3C2AO00443 1686 aa27.86■■■□□ 2.05
RPL17-206ENST00000579495 DDB1Q16531 1140 aa27.85■■■□□ 2.05
RPL17-206ENST00000579495 CSB-PGBD3P0DP91 1061 aa27.84■■■□□ 2.05
RPL17-206ENST00000579495 NBPF14Q5TI25 921 aa27.84■■■□□ 2.05
RPL17-206ENST00000579495 ARHGEF25Q86VW2 580 aa27.84■■■□□ 2.05
RPL17-206ENST00000579495 CARD11Q9BXL7 1154 aa27.84■■■□□ 2.05
RPL17-206ENST00000579495 TTC21AQ8NDW8 1320 aa27.84■■■□□ 2.05
RPL17-206ENST00000579495 KTN1Q86UP2 1357 aaKnown RBP27.84■■■□□ 2.05
RPL17-206ENST00000579495 C11orf95C9JLR9 678 aaPredicted RBP27.83■■■□□ 2.05
RPL17-206ENST00000579495 WDR17Q8IZU2 1322 aa27.82■■■□□ 2.04
RPL17-206ENST00000579495 PARP4Q9UKK3 1724 aaKnown RBP27.81■■■□□ 2.04
RPL17-206ENST00000579495 CPSF1Q10570 1443 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms