RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 FHDC1Q9C0D6 1143 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
PPP4R1-212ENST00000579415 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-212ENST00000579415 PMFBP1Q8TBY8 1022 aa12.16□□□□□ -0.46
PPP4R1-212ENST00000579415 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-212ENST00000579415 ADGRF5Q8IZF2 1346 aa12.15□□□□□ -0.46
PPP4R1-212ENST00000579415 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
PPP4R1-212ENST00000579415 FMN2Q9NZ56 1722 aa12.15□□□□□ -0.46
PPP4R1-212ENST00000579415 PLSCR1O15162 318 aa12.15□□□□□ -0.46
PPP4R1-212ENST00000579415 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
PPP4R1-212ENST00000579415 NRKQ7Z2Y5 1582 aa12.14□□□□□ -0.47
PPP4R1-212ENST00000579415 C11orf95C9JLR9 678 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-212ENST00000579415 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
PPP4R1-212ENST00000579415 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-212ENST00000579415 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
PPP4R1-212ENST00000579415 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
PPP4R1-212ENST00000579415 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 ITGAEP38570 1179 aa12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 EVA1CP58658 441 aa12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 TCP11L2Q8N4U5 519 aa12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-212ENST00000579415 KIF1BO60333 1816 aa12.1□□□□□ -0.47
PPP4R1-212ENST00000579415 PROM2Q8N271 834 aa12.1□□□□□ -0.47
PPP4R1-212ENST00000579415 SGIP1Q9BQI5 828 aa12.1□□□□□ -0.47
PPP4R1-212ENST00000579415 ANKARQ7Z5J8 1434 aa12.1□□□□□ -0.47
PPP4R1-212ENST00000579415 GPR162Q16538 588 aa12.09□□□□□ -0.47
PPP4R1-212ENST00000579415 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
PPP4R1-212ENST00000579415 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-212ENST00000579415 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 MYOM1P52179 1685 aa12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 SSH2Q76I76 1423 aa12.08□□□□□ -0.48
PPP4R1-212ENST00000579415 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 MAP3K5Q99683 1374 aa12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 PRAM1Q96QH2 718 aa12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 ARXQ96QS3 562 aa12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
PPP4R1-212ENST00000579415 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
PPP4R1-212ENST00000579415 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
PPP4R1-212ENST00000579415 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
PPP4R1-212ENST00000579415 PPLO60437 1756 aa12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 PTF1AQ7RTS3 328 aa12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 NGDNQ8NEJ9 315 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 KNDC1Q76NI1 1749 aa12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 TRPM3Q9HCF6 1732 aaPredicted RBP12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-212ENST00000579415 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 OVOS2A0A0J9YW53 1432 aa12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 OVOS2Q6IE36 1432 aa12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 HSPA6P17066 643 aa12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 C14orf93Q9H972 538 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-212ENST00000579415 POGKQ9P215 609 aa12.03□□□□□ -0.48
PPP4R1-212ENST00000579415 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
PPP4R1-212ENST00000579415 RGPD8O14715 1765 aaPredicted RBP12.02□□□□□ -0.48
PPP4R1-212ENST00000579415 CHD4Q14839 1912 aa12.02□□□□□ -0.49
PPP4R1-212ENST00000579415 TXNRD1Q16881 649 aa12.02□□□□□ -0.49
PPP4R1-212ENST00000579415 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-212ENST00000579415 IFT172Q9UG01 1749 aa12.01□□□□□ -0.49
PPP4R1-212ENST00000579415 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
PPP4R1-212ENST00000579415 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
PPP4R1-212ENST00000579415 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
PPP4R1-212ENST00000579415 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
PPP4R1-212ENST00000579415 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
PPP4R1-212ENST00000579415 DDB1Q16531 1140 aa12□□□□□ -0.49
PPP4R1-212ENST00000579415 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
PPP4R1-212ENST00000579415 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
PPP4R1-212ENST00000579415 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
PPP4R1-212ENST00000579415 CPDO75976 1380 aa11.99□□□□□ -0.49
PPP4R1-212ENST00000579415 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
PPP4R1-212ENST00000579415 ATP7BP35670 1465 aa11.98□□□□□ -0.49
PPP4R1-212ENST00000579415 BCL9O00512 1426 aa11.98□□□□□ -0.49
PPP4R1-212ENST00000579415 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
PPP4R1-212ENST00000579415 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
PPP4R1-212ENST00000579415 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
PPP4R1-212ENST00000579415 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
PPP4R1-212ENST00000579415 GRIN3BO60391 1043 aa11.97□□□□□ -0.49
PPP4R1-212ENST00000579415 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-212ENST00000579415 PEAK1Q9H792 1746 aa11.97□□□□□ -0.49
PPP4R1-212ENST00000579415 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-212ENST00000579415 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.49
PPP4R1-212ENST00000579415 TULP4Q9NRJ4 1543 aa11.96□□□□□ -0.5
PPP4R1-212ENST00000579415 CRB1P82279 1406 aa11.95□□□□□ -0.5
PPP4R1-212ENST00000579415 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-212ENST00000579415 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
PPP4R1-212ENST00000579415 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-212ENST00000579415 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
PPP4R1-212ENST00000579415 USP19O94966 1318 aa11.93□□□□□ -0.5
PPP4R1-212ENST00000579415 GCP02774 474 aa11.93□□□□□ -0.5
PPP4R1-212ENST00000579415 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms