RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
CCDC57-212ENST00000578910 BTG4Q9NY30 223 aa20.81■□□□□ 0.92
CCDC57-212ENST00000578910 CABP1Q9NZU7 370 aa20.81■□□□□ 0.92
CCDC57-212ENST00000578910 CCDC9Q9Y3X0 531 aaKnown RBP20.81■□□□□ 0.92
CCDC57-212ENST00000578910 TRPM1Q7Z4N2 1603 aa20.8■□□□□ 0.92
CCDC57-212ENST00000578910 ITSN1Q15811 1721 aa20.79■□□□□ 0.92
CCDC57-212ENST00000578910 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
CCDC57-212ENST00000578910 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
CCDC57-212ENST00000578910 ABTB2Q8N961 1025 aa20.78■□□□□ 0.92
CCDC57-212ENST00000578910 PPIP5K1Q6PFW1 1433 aa20.78■□□□□ 0.92
CCDC57-212ENST00000578910 ONECUT3O60422 494 aaPredicted RBP20.77■□□□□ 0.92
CCDC57-212ENST00000578910 ABCA3Q99758 1704 aa20.77■□□□□ 0.92
CCDC57-212ENST00000578910 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.77■□□□□ 0.92
CCDC57-212ENST00000578910 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
CCDC57-212ENST00000578910 ZC3H6P61129 1189 aaKnown RBP20.76■□□□□ 0.91
CCDC57-212ENST00000578910 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
CCDC57-212ENST00000578910 CARD11Q9BXL7 1154 aa20.76■□□□□ 0.91
CCDC57-212ENST00000578910 GLI3P10071 1580 aa20.76■□□□□ 0.91
CCDC57-212ENST00000578910 ATAD2Q6PL18 1390 aa20.75■□□□□ 0.91
CCDC57-212ENST00000578910 QRICH2Q9H0J4 1663 aa20.75■□□□□ 0.91
CCDC57-212ENST00000578910 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
CCDC57-212ENST00000578910 TOPAZ1Q8N9V7 1692 aa20.74■□□□□ 0.91
CCDC57-212ENST00000578910 CHRNA2Q15822 529 aa20.74■□□□□ 0.91
CCDC57-212ENST00000578910 NLRP13Q86W25 1043 aa20.73■□□□□ 0.91
CCDC57-212ENST00000578910 PLCH1Q4KWH8 1693 aa20.73■□□□□ 0.91
CCDC57-212ENST00000578910 NWD2Q9ULI1 1742 aa20.72■□□□□ 0.91
CCDC57-212ENST00000578910 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
CCDC57-212ENST00000578910 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
CCDC57-212ENST00000578910 GCP02774 474 aa20.69■□□□□ 0.9
CCDC57-212ENST00000578910 FAM98CQ17RN3 349 aaKnown RBP20.69■□□□□ 0.9
CCDC57-212ENST00000578910 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
CCDC57-212ENST00000578910 COL14A1Q05707 1796 aaKnown RBP20.69■□□□□ 0.9
CCDC57-212ENST00000578910 NLRP6P59044 892 aa20.68■□□□□ 0.9
CCDC57-212ENST00000578910 CCDC125Q86Z20 511 aa20.68■□□□□ 0.9
CCDC57-212ENST00000578910 SPATA31A5Q5VU36 1347 aa20.68■□□□□ 0.9
CCDC57-212ENST00000578910 SPATA31A7Q8IWB4 1347 aa20.68■□□□□ 0.9
CCDC57-212ENST00000578910 A0A0G2JS52 829 aa20.67■□□□□ 0.9
CCDC57-212ENST00000578910 MYT1Q01538 1121 aa20.67■□□□□ 0.9
CCDC57-212ENST00000578910 STRN4Q9NRL3 753 aa20.67■□□□□ 0.9
CCDC57-212ENST00000578910 USP19O94966 1318 aa20.67■□□□□ 0.9
CCDC57-212ENST00000578910 BRD4O60885 1362 aaPredicted RBP20.67■□□□□ 0.9
CCDC57-212ENST00000578910 KRT27Q7Z3Y8 459 aa20.66■□□□□ 0.9
CCDC57-212ENST00000578910 USP6P35125 1406 aa20.66■□□□□ 0.9
CCDC57-212ENST00000578910 EVA1CP58658 441 aa20.65■□□□□ 0.9
CCDC57-212ENST00000578910 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
CCDC57-212ENST00000578910 NRAPQ86VF7 1730 aa20.64■□□□□ 0.9
CCDC57-212ENST00000578910 SSH2Q76I76 1423 aa20.64■□□□□ 0.89
CCDC57-212ENST00000578910 TTC21BQ7Z4L5 1316 aa20.64■□□□□ 0.89
CCDC57-212ENST00000578910 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
CCDC57-212ENST00000578910 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
CCDC57-212ENST00000578910 CPDO75976 1380 aa20.61■□□□□ 0.89
CCDC57-212ENST00000578910 SBNO2Q9Y2G9 1366 aa20.61■□□□□ 0.89
CCDC57-212ENST00000578910 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
CCDC57-212ENST00000578910 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
CCDC57-212ENST00000578910 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
CCDC57-212ENST00000578910 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
CCDC57-212ENST00000578910 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
CCDC57-212ENST00000578910 FAM182BQ5T319 152 aa20.59■□□□□ 0.89
CCDC57-212ENST00000578910 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
CCDC57-212ENST00000578910 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
CCDC57-212ENST00000578910 CPSF1Q10570 1443 aaKnown RBP20.59■□□□□ 0.89
CCDC57-212ENST00000578910 EP400Q96L91 3159 aa20.58■□□□□ 0.89
CCDC57-212ENST00000578910 CAMTA1Q9Y6Y1 1673 aa20.58■□□□□ 0.89
CCDC57-212ENST00000578910 KTN1Q86UP2 1357 aaKnown RBP20.58■□□□□ 0.88
CCDC57-212ENST00000578910 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
CCDC57-212ENST00000578910 TESK2Q96S53 571 aa20.57■□□□□ 0.88
CCDC57-212ENST00000578910 TTC21AQ8NDW8 1320 aa20.56■□□□□ 0.88
CCDC57-212ENST00000578910 DEFB132Q7Z7B7 95 aa20.56■□□□□ 0.88
CCDC57-212ENST00000578910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC57-212ENST00000578910 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
CCDC57-212ENST00000578910 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
CCDC57-212ENST00000578910 BLMP54132 1417 aaPredicted RBP20.55■□□□□ 0.88
CCDC57-212ENST00000578910 SF3B2Q13435 895 aaKnown RBP20.55■□□□□ 0.88
CCDC57-212ENST00000578910 SOX12O15370 315 aa20.54■□□□□ 0.88
CCDC57-212ENST00000578910 BARGINQ6ZT62 677 aa20.54■□□□□ 0.88
CCDC57-212ENST00000578910 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
CCDC57-212ENST00000578910 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
CCDC57-212ENST00000578910 ARHGEF25Q86VW2 580 aa20.53■□□□□ 0.88
CCDC57-212ENST00000578910 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
CCDC57-212ENST00000578910 KCNH5Q8NCM2 988 aa20.53■□□□□ 0.88
CCDC57-212ENST00000578910 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
CCDC57-212ENST00000578910 AKAP12Q02952 1782 aa20.52■□□□□ 0.88
CCDC57-212ENST00000578910 PIK3C2AO00443 1686 aa20.51■□□□□ 0.87
CCDC57-212ENST00000578910 SLIT3O75094 1523 aa20.51■□□□□ 0.87
CCDC57-212ENST00000578910 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
CCDC57-212ENST00000578910 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
CCDC57-212ENST00000578910 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
CCDC57-212ENST00000578910 NME9Q86XW9 330 aa20.5■□□□□ 0.87
CCDC57-212ENST00000578910 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
CCDC57-212ENST00000578910 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
CCDC57-212ENST00000578910 THRAP3Q9Y2W1 955 aaKnown RBP20.5■□□□□ 0.87
CCDC57-212ENST00000578910 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
CCDC57-212ENST00000578910 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
CCDC57-212ENST00000578910 COL5A2P05997 1499 aaPredicted RBP20.48■□□□□ 0.87
CCDC57-212ENST00000578910 FAM196AQ6ZSG2 479 aa20.47■□□□□ 0.87
CCDC57-212ENST00000578910 TOM1L2Q6ZVM7 507 aa20.47■□□□□ 0.87
CCDC57-212ENST00000578910 CLSPNQ9HAW4 1339 aa20.47■□□□□ 0.87
CCDC57-212ENST00000578910 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
CCDC57-212ENST00000578910 BAG6P46379 1132 aa20.46■□□□□ 0.87
CCDC57-212ENST00000578910 A0A1W2PP64 1363 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms