RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 RPIAP49247 311 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 NBPF14Q5TI25 921 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 EPS8L1Q8TE68 723 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 GPKOWQ92917 476 aaPredicted RBP eCLIP4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 POM121Q96HA1 1249 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 ZMYND15Q9H091 742 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 TBC1D2BQ9UPU7 963 aa4.54□□□□□ -1.68
PTP4A1-204ENST00000578299 PLA2G2CQ5R387 149 aa4.53□□□□□ -1.68
PTP4A1-204ENST00000578299 CLUAP1Q96AJ1 413 aa4.53□□□□□ -1.68
PTP4A1-204ENST00000578299 TIMELESSQ9UNS1 1208 aa4.53□□□□□ -1.68
PTP4A1-204ENST00000578299 GPR37L1O60883 481 aa4.52□□□□□ -1.69
PTP4A1-204ENST00000578299 CD2BP2O95400 341 aaKnown RBP4.52□□□□□ -1.69
PTP4A1-204ENST00000578299 ABL2P42684 1182 aa4.52□□□□□ -1.69
PTP4A1-204ENST00000578299 PROSER2Q86WR7 435 aaPredicted RBP4.52□□□□□ -1.69
PTP4A1-204ENST00000578299 GPSM3Q9Y4H4 160 aa4.52□□□□□ -1.69
PTP4A1-204ENST00000578299 SLC19A1P41440 591 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 PTK2Q05397 1052 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 TRIM32Q13049 653 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 WASHC4Q2M389 1173 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 PDXDC2PQ6P474 469 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 ZNF511Q8NB15 262 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 BAP1Q92560 729 aa4.51□□□□□ -1.69
PTP4A1-204ENST00000578299 ZBBXA8MT70 800 aa4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 TRAK2O60296 914 aa4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 WNT7BP56706 349 aa4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 IRF5Q13568 498 aa4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 LIAT1Q6ZQX7 453 aa4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 BPHLQ86WA6 291 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 FNBP4Q8N3X1 1017 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 V9GY48 417 aaPredicted RBP4.5□□□□□ -1.69
PTP4A1-204ENST00000578299 RGS20O76081 388 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 SH3BP2P78314 561 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 NR1H3Q13133 447 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 AGERQ15109 404 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 LINC01559Q495D7 138 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 SH3BP5LQ7L8J4 393 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 ZNF592Q92610 1267 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 EMID1Q96A84 441 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 ARHGAP9Q9BRR9 750 aa4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 ZNF330Q9Y3S2 320 aaPredicted RBP4.49□□□□□ -1.69
PTP4A1-204ENST00000578299 FBXO45P0C2W1 286 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 SKOR1P84550 965 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 SPRYD7Q5W111 196 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 SH3RF1Q7Z6J0 888 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 ZBTB33Q86T24 672 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 PRKD2Q9BZL6 878 aa4.48□□□□□ -1.69
PTP4A1-204ENST00000578299 MAGEB6P1A0A0J9YX57 407 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 VARSP26640 1264 aaKnown RBP4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 SOX11P35716 441 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 MCCD1P59942 119 aaPredicted RBP4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 EIF4G2P78344 907 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 VAC14Q08AM6 782 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 RC3H1Q5TC82 1133 aaKnown RBP4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 ZNF697Q5TEC3 545 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 ZNF598Q86UK7 904 aaKnown RBP4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 FOXJ1Q92949 421 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 OCSTAMPQ9BR26 566 aa4.47□□□□□ -1.69
PTP4A1-204ENST00000578299 WNT7AO00755 349 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 C4orf48Q5BLP8 95 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 EHBP1Q8NDI1 1231 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 FAM174AQ8TBP5 190 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 ADAM32Q8TC27 787 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 C1QTNF2Q9BXJ5 285 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 CARD14Q9BXL6 1004 aa4.46□□□□□ -1.7
PTP4A1-204ENST00000578299 SEMA3FQ13275 785 aa4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 ERFEQ4G0M1 354 aa4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 DZIP3Q86Y13 1208 aaKnown RBP4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 TRMT44Q8IYL2 757 aaKnown RBP4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 CDV3Q9UKY7 258 aaKnown RBP4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 ZNF777Q9ULD5 760 aaPredicted RBP4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 PCDHB9Q9Y5E1 797 aa4.45□□□□□ -1.7
PTP4A1-204ENST00000578299 POM121CA8CG34 1229 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 MPNDQ8N594 471 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 GLMNQ92990 594 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 SLC10A4Q96EP9 437 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 MRGPRX2Q96LB1 330 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 ALG2Q9H553 416 aa4.44□□□□□ -1.7
PTP4A1-204ENST00000578299 FOXC1Q12948 553 aa4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 NBPF20Q3BBV1 942 aa4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 HDGFL1Q5TGJ6 251 aa4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 CALR3Q96L12 384 aaKnown RBP4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 PKD2L1Q9P0L9 805 aa4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 MAP4K5Q9Y4K4 846 aa4.43□□□□□ -1.7
PTP4A1-204ENST00000578299 ARID3CA6NKF2 412 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 SUPT5HO00267 1087 aaKnown RBP4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 SIAH2O43255 324 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 GDF9O60383 454 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 PRR20EP86478 221 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 PRR20CP86479 221 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 PRR20DP86480 221 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 PRR20BP86481 221 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 PRR20AP86496 221 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 VASH1Q7L8A9 365 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 CCDC125Q86Z20 511 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 ADAMTS19Q8TE59 1207 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 CDK15Q96Q40 435 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 CEP126Q9P2H0 1117 aa4.42□□□□□ -1.7
PTP4A1-204ENST00000578299 ARID5BQ14865 1188 aa4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 RNF20Q5VTR2 975 aa4.41□□□□□ -1.7
PTP4A1-204ENST00000578299 SEPT12Q8IYM1 358 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms