RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
TOP2A-203ENST00000577706 NDUFV2P19404 249 aa8.71□□□□□ -1.02
TOP2A-203ENST00000577706 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
TOP2A-203ENST00000577706 PDE4DQ08499 809 aa8.71□□□□□ -1.02
TOP2A-203ENST00000577706 PRR7Q8TB68 274 aa8.71□□□□□ -1.02
TOP2A-203ENST00000577706 TLL2Q9Y6L7 1015 aa8.71□□□□□ -1.02
TOP2A-203ENST00000577706 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
TOP2A-203ENST00000577706 H3BM21 787 aa8.7□□□□□ -1.02
TOP2A-203ENST00000577706 MPNDQ8N594 471 aa8.7□□□□□ -1.02
TOP2A-203ENST00000577706 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
TOP2A-203ENST00000577706 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
TOP2A-203ENST00000577706 NNTQ13423 1086 aa8.69□□□□□ -1.02
TOP2A-203ENST00000577706 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
TOP2A-203ENST00000577706 MTMR2Q13614 643 aa8.68□□□□□ -1.02
TOP2A-203ENST00000577706 SCARF1Q14162 830 aa8.68□□□□□ -1.02
TOP2A-203ENST00000577706 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
TOP2A-203ENST00000577706 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
TOP2A-203ENST00000577706 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
TOP2A-203ENST00000577706 WDR4P57081 412 aaKnown RBP8.66□□□□□ -1.02
TOP2A-203ENST00000577706 BEGAINQ9BUH8 593 aa8.66□□□□□ -1.02
TOP2A-203ENST00000577706 ADH1CP00326 375 aa8.65□□□□□ -1.02
TOP2A-203ENST00000577706 TIMP2P16035 220 aa8.65□□□□□ -1.02
TOP2A-203ENST00000577706 PURBQ96QR8 312 aaKnown RBP8.65□□□□□ -1.02
TOP2A-203ENST00000577706 CTHP32929 405 aa8.64□□□□□ -1.03
TOP2A-203ENST00000577706 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
TOP2A-203ENST00000577706 TPRNQ4KMQ1 711 aa8.63□□□□□ -1.03
TOP2A-203ENST00000577706 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
TOP2A-203ENST00000577706 KLF16Q9BXK1 252 aaPredicted RBP8.62□□□□□ -1.03
TOP2A-203ENST00000577706 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
TOP2A-203ENST00000577706 GJA5P36382 358 aa8.61□□□□□ -1.03
TOP2A-203ENST00000577706 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
TOP2A-203ENST00000577706 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
TOP2A-203ENST00000577706 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
TOP2A-203ENST00000577706 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
TOP2A-203ENST00000577706 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
TOP2A-203ENST00000577706 RSBN1LQ6PCB5 846 aaPredicted RBP8.59□□□□□ -1.03
TOP2A-203ENST00000577706 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
TOP2A-203ENST00000577706 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
TOP2A-203ENST00000577706 ZIC2O95409 532 aaPredicted RBP8.58□□□□□ -1.04
TOP2A-203ENST00000577706 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
TOP2A-203ENST00000577706 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
TOP2A-203ENST00000577706 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
TOP2A-203ENST00000577706 MAN1A2O60476 641 aa8.57□□□□□ -1.04
TOP2A-203ENST00000577706 NR5A1Q13285 461 aa8.57□□□□□ -1.04
TOP2A-203ENST00000577706 AGERQ15109 404 aa8.57□□□□□ -1.04
TOP2A-203ENST00000577706 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
TOP2A-203ENST00000577706 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
TOP2A-203ENST00000577706 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
TOP2A-203ENST00000577706 HRCP23327 699 aa8.56□□□□□ -1.04
TOP2A-203ENST00000577706 C6orf118Q5T5N4 469 aa8.56□□□□□ -1.04
TOP2A-203ENST00000577706 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
TOP2A-203ENST00000577706 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
TOP2A-203ENST00000577706 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
TOP2A-203ENST00000577706 SPTLC1O15269 473 aa8.55□□□□□ -1.04
TOP2A-203ENST00000577706 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
TOP2A-203ENST00000577706 UPP2O95045 317 aa8.54□□□□□ -1.04
TOP2A-203ENST00000577706 NR3C2P08235 984 aa8.54□□□□□ -1.04
TOP2A-203ENST00000577706 PRKCSHP14314 528 aaPredicted RBP8.54□□□□□ -1.04
TOP2A-203ENST00000577706 GRM5P41594 1212 aa8.54□□□□□ -1.04
TOP2A-203ENST00000577706 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
TOP2A-203ENST00000577706 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
TOP2A-203ENST00000577706 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
TOP2A-203ENST00000577706 BMP2P12643 396 aa8.53□□□□□ -1.04
TOP2A-203ENST00000577706 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
TOP2A-203ENST00000577706 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
TOP2A-203ENST00000577706 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
TOP2A-203ENST00000577706 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
TOP2A-203ENST00000577706 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
TOP2A-203ENST00000577706 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
TOP2A-203ENST00000577706 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
TOP2A-203ENST00000577706 LIMD1Q9UGP4 676 aa8.51□□□□□ -1.05
TOP2A-203ENST00000577706 NEUROD2Q15784 382 aa8.5□□□□□ -1.05
TOP2A-203ENST00000577706 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
TOP2A-203ENST00000577706 MEIOBQ8N635 442 aa8.5□□□□□ -1.05
TOP2A-203ENST00000577706 TSC1Q92574 1164 aa8.5□□□□□ -1.05
TOP2A-203ENST00000577706 POLR3EQ9NVU0 708 aa8.5□□□□□ -1.05
TOP2A-203ENST00000577706 KCNMA1Q12791 1236 aa8.49□□□□□ -1.05
TOP2A-203ENST00000577706 ARMC2Q8NEN0 867 aa8.49□□□□□ -1.05
TOP2A-203ENST00000577706 SOS2Q07890 1332 aaPredicted RBP8.49□□□□□ -1.05
TOP2A-203ENST00000577706 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 DDRGK1Q96HY6 314 aa8.47□□□□□ -1.05
TOP2A-203ENST00000577706 TSEN34Q9BSV6 310 aaKnown RBP8.47□□□□□ -1.05
TOP2A-203ENST00000577706 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
TOP2A-203ENST00000577706 DNMT3LQ9UJW3 386 aa8.47□□□□□ -1.05
TOP2A-203ENST00000577706 FSHRP23945 695 aa8.46□□□□□ -1.06
TOP2A-203ENST00000577706 QPCTQ16769 361 aa8.46□□□□□ -1.06
TOP2A-203ENST00000577706 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
TOP2A-203ENST00000577706 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
TOP2A-203ENST00000577706 C1QTNF2Q9BXJ5 285 aa8.46□□□□□ -1.06
TOP2A-203ENST00000577706 MAP4K5Q9Y4K4 846 aa8.46□□□□□ -1.06
TOP2A-203ENST00000577706 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
TOP2A-203ENST00000577706 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
TOP2A-203ENST00000577706 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
TOP2A-203ENST00000577706 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
TOP2A-203ENST00000577706 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
TOP2A-203ENST00000577706 RNF225M0QZC1 329 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms