RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 TRIM34Q9BYJ4 488 aa6.84□□□□□ -1.32
BRIP1-202ENST00000577598 TMEM88BA6NKF7 163 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 SPACA7Q96KW9 195 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 MOXD2PA6NHM9 499 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 CNGA1P29973 690 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 CAPN12Q6ZSI9 719 aa6.83□□□□□ -1.32
BRIP1-202ENST00000577598 TCERG1O14776 1098 aaKnown RBP6.82□□□□□ -1.32
BRIP1-202ENST00000577598 SKIP12755 728 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 RTL5Q5HYW3 569 aaPredicted RBP6.82□□□□□ -1.32
BRIP1-202ENST00000577598 NUTM1Q86Y26 1132 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 CHMP4BP1P59074 171 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 ODR4Q5SWX8 454 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 NLGN1Q8N2Q7 840 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 CHMP7Q8WUX9 453 aaPredicted RBP6.82□□□□□ -1.32
BRIP1-202ENST00000577598 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 ZNF394Q53GI3 561 aa6.82□□□□□ -1.32
BRIP1-202ENST00000577598 C10orf62Q5T681 223 aaPredicted RBP6.82□□□□□ -1.32
BRIP1-202ENST00000577598 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
BRIP1-202ENST00000577598 CRTC2Q53ET0 693 aaPredicted RBP6.81□□□□□ -1.32
BRIP1-202ENST00000577598 HSP90AB2PQ58FF8 381 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 JAZF1Q86VZ6 243 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 RPS6KC1Q96S38 1066 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 TERF1P54274 439 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 RAB15P59190 212 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 INPP5FQ9Y2H2 1132 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 COL4A3BPQ9Y5P4 624 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
BRIP1-202ENST00000577598 CTDSPL2Q05D32 466 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 SAFB2Q14151 953 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRIP1-202ENST00000577598 SDE2Q6IQ49 451 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 IFNL1Q8IU54 200 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 ZNF710Q8N1W2 664 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 HINFPQ9BQA5 517 aa6.81□□□□□ -1.32
BRIP1-202ENST00000577598 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRIP1-202ENST00000577598 MAFBQ9Y5Q3 323 aaPredicted RBP6.81□□□□□ -1.32
BRIP1-202ENST00000577598 ATP2B4P23634 1241 aa6.8□□□□□ -1.32
BRIP1-202ENST00000577598 DNAJC14Q6Y2X3 702 aaPredicted RBP6.8□□□□□ -1.32
BRIP1-202ENST00000577598 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
BRIP1-202ENST00000577598 OXER1Q8TDS5 423 aa6.8□□□□□ -1.32
BRIP1-202ENST00000577598 CRISPLD2Q9H0B8 497 aa6.8□□□□□ -1.32
BRIP1-202ENST00000577598 PRIM1P49642 420 aaKnown RBP6.8□□□□□ -1.32
BRIP1-202ENST00000577598 RNF187Q5TA31 235 aaPredicted RBP6.8□□□□□ -1.32
BRIP1-202ENST00000577598 FAN1Q9Y2M0 1017 aa6.8□□□□□ -1.32
BRIP1-202ENST00000577598 IFT57Q9NWB7 429 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 POLD1P28340 1107 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 INTUQ9ULD6 942 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 RNF40O75150 1001 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 SYCP2LQ5T4T6 812 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 RAVER1Q8IY67 606 aaKnown RBP6.79□□□□□ -1.32
BRIP1-202ENST00000577598 FBXO22Q8NEZ5 403 aa6.79□□□□□ -1.32
BRIP1-202ENST00000577598 ISY1Q9ULR0 285 aaKnown RBP6.79□□□□□ -1.32
BRIP1-202ENST00000577598 CCDC181Q5TID7 509 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 GIGYF1O75420 1035 aaPredicted RBP6.78□□□□□ -1.32
BRIP1-202ENST00000577598 CENPOQ9BU64 300 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 CLSPNQ9HAW4 1339 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 U2SURPO15042 1029 aaKnown RBP6.78□□□□□ -1.32
BRIP1-202ENST00000577598 PDIA6Q15084 440 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 EAPPQ56P03 285 aaPredicted RBP6.78□□□□□ -1.32
BRIP1-202ENST00000577598 FERMT3Q86UX7 667 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 PDILTQ8N807 584 aa6.78□□□□□ -1.32
BRIP1-202ENST00000577598 TOMM20Q15388 145 aa6.77□□□□□ -1.32
BRIP1-202ENST00000577598 NPAS4Q8IUM7 802 aa6.77□□□□□ -1.32
BRIP1-202ENST00000577598 TMC2Q8TDI7 906 aa6.77□□□□□ -1.32
BRIP1-202ENST00000577598 PHLDB3Q6NSJ2 640 aa6.77□□□□□ -1.33
BRIP1-202ENST00000577598 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
BRIP1-202ENST00000577598 SYMPKQ92797 1274 aaKnown RBP6.77□□□□□ -1.33
BRIP1-202ENST00000577598 SRPK1Q96SB4 655 aaKnown RBP6.77□□□□□ -1.33
BRIP1-202ENST00000577598 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
BRIP1-202ENST00000577598 MS4A4AQ96JQ5 239 aa6.77□□□□□ -1.33
BRIP1-202ENST00000577598 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
BRIP1-202ENST00000577598 SETQ01105 290 aaPredicted RBP6.76□□□□□ -1.33
BRIP1-202ENST00000577598 KSR2Q6VAB6 950 aa6.76□□□□□ -1.33
BRIP1-202ENST00000577598 GOPCQ9HD26 462 aa6.76□□□□□ -1.33
BRIP1-202ENST00000577598 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
BRIP1-202ENST00000577598 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
BRIP1-202ENST00000577598 DPY19L2Q6NUT2 758 aa6.76□□□□□ -1.33
BRIP1-202ENST00000577598 PLPP6Q8IY26 295 aa6.76□□□□□ -1.33
BRIP1-202ENST00000577598 CCDC194A0A1B0GVG4 234 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
BRIP1-202ENST00000577598 CTDP1Q9Y5B0 961 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-202ENST00000577598 SOWAHDA6NJG2 315 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 STK10O94804 968 aaKnown RBP6.75□□□□□ -1.33
BRIP1-202ENST00000577598 NCOA4Q13772 614 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 LRRC41Q15345 812 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 CT47A1Q5JQC4 288 aaPredicted RBP6.75□□□□□ -1.33
BRIP1-202ENST00000577598 ARMCX6Q7L4S7 300 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 HDAC9Q9UKV0 1011 aa6.75□□□□□ -1.33
BRIP1-202ENST00000577598 MAP3K13O43283 966 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 DEKP35659 375 aaKnown RBP6.74□□□□□ -1.33
BRIP1-202ENST00000577598 FAM160A1Q05DH4 1040 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 OSBPP22059 807 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 CANXP27824 592 aaKnown RBP6.74□□□□□ -1.33
BRIP1-202ENST00000577598 B4GALNT3Q6L9W6 998 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 TSPY2A6NKD2 308 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 TSPY3P0CV98 308 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms