RNA–Protein interactions for RNA: ENST00000577427.1

SCO1-203, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3 BASIC

Gene SCO1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-203ENST00000577427 CCDC61Q9Y6R9 512 aa25.65■■□□□ 1.7
SCO1-203ENST00000577427 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
SCO1-203ENST00000577427 XRN1Q8IZH2 1706 aaKnown RBP25.64■■□□□ 1.7
SCO1-203ENST00000577427 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.7
SCO1-203ENST00000577427 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.7
SCO1-203ENST00000577427 TCP11L2Q8N4U5 519 aa25.64■■□□□ 1.7
SCO1-203ENST00000577427 PNPLA6Q8IY17 1366 aa25.64■■□□□ 1.69
SCO1-203ENST00000577427 PHF23Q9BUL5 403 aaPredicted RBP25.63■■□□□ 1.69
SCO1-203ENST00000577427 TBX22Q9Y458 520 aa25.63■■□□□ 1.69
SCO1-203ENST00000577427 PTPRUQ92729 1446 aa25.62■■□□□ 1.69
SCO1-203ENST00000577427 WDR63Q8IWG1 891 aa25.61■■□□□ 1.69
SCO1-203ENST00000577427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
SCO1-203ENST00000577427 SPINK5Q9NQ38 1064 aaPredicted RBP25.59■■□□□ 1.69
SCO1-203ENST00000577427 ADAMTSL3P82987 1691 aa25.59■■□□□ 1.69
SCO1-203ENST00000577427 ZNF692Q9BU19 519 aaPredicted RBP25.59■■□□□ 1.69
SCO1-203ENST00000577427 PNNQ9H307 717 aaKnown RBP25.59■■□□□ 1.69
SCO1-203ENST00000577427 PLIN1O60240 522 aa25.58■■□□□ 1.69
SCO1-203ENST00000577427 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.69
SCO1-203ENST00000577427 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.68
SCO1-203ENST00000577427 RBM19Q9Y4C8 960 aaKnown RBP25.57■■□□□ 1.68
SCO1-203ENST00000577427 AATKQ6ZMQ8 1374 aa25.57■■□□□ 1.68
SCO1-203ENST00000577427 PRR36Q9H6K5 1346 aa25.56■■□□□ 1.68
SCO1-203ENST00000577427 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
SCO1-203ENST00000577427 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
SCO1-203ENST00000577427 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
SCO1-203ENST00000577427 CRBNQ96SW2 442 aa25.55■■□□□ 1.68
SCO1-203ENST00000577427 RRP7AQ9Y3A4 280 aaKnown RBP25.55■■□□□ 1.68
SCO1-203ENST00000577427 DMRT2Q9Y5R5 561 aa25.55■■□□□ 1.68
SCO1-203ENST00000577427 MAPK8IP3Q9UPT6 1336 aa25.54■■□□□ 1.68
SCO1-203ENST00000577427 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
SCO1-203ENST00000577427 NEUROD2Q15784 382 aa25.53■■□□□ 1.68
SCO1-203ENST00000577427 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
SCO1-203ENST00000577427 NALCNQ8IZF0 1738 aa25.53■■□□□ 1.68
SCO1-203ENST00000577427 PLEKHF1Q96S99 279 aa25.52■■□□□ 1.68
SCO1-203ENST00000577427 AMOTL2Q9Y2J4 779 aa25.52■■□□□ 1.68
SCO1-203ENST00000577427 NME9Q86XW9 330 aa25.51■■□□□ 1.67
SCO1-203ENST00000577427 COG3Q96JB2 828 aa25.51■■□□□ 1.67
SCO1-203ENST00000577427 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
SCO1-203ENST00000577427 PLEKHG3A1L390 1219 aa25.5■■□□□ 1.67
SCO1-203ENST00000577427 MYH16Q9H6N6 1097 aa25.5■■□□□ 1.67
SCO1-203ENST00000577427 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
SCO1-203ENST00000577427 FMN2Q9NZ56 1722 aa25.47■■□□□ 1.67
SCO1-203ENST00000577427 USP6P35125 1406 aa25.47■■□□□ 1.67
SCO1-203ENST00000577427 RGPD8O14715 1765 aaPredicted RBP25.47■■□□□ 1.67
SCO1-203ENST00000577427 CHD2O14647 1828 aaKnown RBP25.47■■□□□ 1.67
SCO1-203ENST00000577427 SETD1BQ9UPS6 1966 aaKnown RBP25.46■■□□□ 1.67
SCO1-203ENST00000577427 TMPOP42166 694 aaKnown RBP25.46■■□□□ 1.67
SCO1-203ENST00000577427 FCHSD2O94868 740 aa25.45■■□□□ 1.67
SCO1-203ENST00000577427 C20orf194Q5TEA3 1177 aa25.45■■□□□ 1.67
SCO1-203ENST00000577427 ACEP12821 1306 aa25.44■■□□□ 1.66
SCO1-203ENST00000577427 IL16Q14005 1332 aa25.44■■□□□ 1.66
SCO1-203ENST00000577427 TTC21BQ7Z4L5 1316 aa25.44■■□□□ 1.66
SCO1-203ENST00000577427 OVOS2A0A0J9YW53 1432 aa25.43■■□□□ 1.66
SCO1-203ENST00000577427 OVOS2Q6IE36 1432 aa25.43■■□□□ 1.66
SCO1-203ENST00000577427 ANKARQ7Z5J8 1434 aa25.43■■□□□ 1.66
SCO1-203ENST00000577427 NEFMP07197 916 aa25.43■■□□□ 1.66
SCO1-203ENST00000577427 PPM1GO15355 546 aaPredicted RBP25.41■■□□□ 1.66
SCO1-203ENST00000577427 BCAR3O75815 825 aa25.41■■□□□ 1.66
SCO1-203ENST00000577427 CT47B1P0C2W7 299 aaPredicted RBP25.41■■□□□ 1.66
SCO1-203ENST00000577427 PDE3AQ14432 1141 aa25.4■■□□□ 1.66
SCO1-203ENST00000577427 RSPH6AQ9H0K4 717 aa25.4■■□□□ 1.66
SCO1-203ENST00000577427 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
SCO1-203ENST00000577427 EMILIN1Q9Y6C2 1016 aa25.4■■□□□ 1.66
SCO1-203ENST00000577427 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
SCO1-203ENST00000577427 TTC21AQ8NDW8 1320 aa25.39■■□□□ 1.66
SCO1-203ENST00000577427 TRIM35Q9UPQ4 493 aa25.38■■□□□ 1.65
SCO1-203ENST00000577427 ANKLE2Q86XL3 938 aa25.37■■□□□ 1.65
SCO1-203ENST00000577427 USP54Q70EL1 1684 aa25.37■■□□□ 1.65
SCO1-203ENST00000577427 CANXP27824 592 aaKnown RBP25.37■■□□□ 1.65
SCO1-203ENST00000577427 IL13P35225 146 aa25.37■■□□□ 1.65
SCO1-203ENST00000577427 RARSP54136 660 aaKnown RBP25.36■■□□□ 1.65
SCO1-203ENST00000577427 RIPK4P57078 832 aa25.36■■□□□ 1.65
SCO1-203ENST00000577427 FBLN1P23142 703 aa25.35■■□□□ 1.65
SCO1-203ENST00000577427 PRKAR2BP31323 418 aa25.35■■□□□ 1.65
SCO1-203ENST00000577427 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
SCO1-203ENST00000577427 USP31Q70CQ4 1352 aa25.35■■□□□ 1.65
SCO1-203ENST00000577427 FANCIQ9NVI1 1328 aa25.35■■□□□ 1.65
SCO1-203ENST00000577427 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
SCO1-203ENST00000577427 NUTM2FA1L443 756 aa25.34■■□□□ 1.65
SCO1-203ENST00000577427 PIK3C2AO00443 1686 aa25.33■■□□□ 1.65
SCO1-203ENST00000577427 CENPQQ7L2Z9 268 aaPredicted RBP25.33■■□□□ 1.65
SCO1-203ENST00000577427 PEAK1Q9H792 1746 aa25.33■■□□□ 1.64
SCO1-203ENST00000577427 KCNA6P17658 529 aa25.32■■□□□ 1.64
SCO1-203ENST00000577427 RGPD1P0DJD0 1748 aa25.31■■□□□ 1.64
SCO1-203ENST00000577427 NFE2L2Q16236 605 aa25.31■■□□□ 1.64
SCO1-203ENST00000577427 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
SCO1-203ENST00000577427 RRS1Q15050 365 aaKnown RBP25.3■■□□□ 1.64
SCO1-203ENST00000577427 CALD1Q05682 793 aaKnown RBP25.29■■□□□ 1.64
SCO1-203ENST00000577427 AAMPQ13685 434 aa25.29■■□□□ 1.64
SCO1-203ENST00000577427 MS4A1P11836 297 aa25.28■■□□□ 1.64
SCO1-203ENST00000577427 NGDNQ8NEJ9 315 aaKnown RBP25.28■■□□□ 1.64
SCO1-203ENST00000577427 HMOX1P09601 288 aa25.27■■□□□ 1.64
SCO1-203ENST00000577427 MARF1Q9Y4F3 1742 aaKnown RBP25.26■■□□□ 1.63
SCO1-203ENST00000577427 LMOD3Q0VAK6 560 aa25.26■■□□□ 1.63
SCO1-203ENST00000577427 PMFBP1Q8TBY8 1022 aa25.26■■□□□ 1.63
SCO1-203ENST00000577427 TSR2Q969E8 191 aaKnown RBP25.26■■□□□ 1.63
SCO1-203ENST00000577427 NPHP4O75161 1426 aaPredicted RBP25.25■■□□□ 1.63
SCO1-203ENST00000577427 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
SCO1-203ENST00000577427 EXOSC9Q06265 439 aaKnown RBP25.24■■□□□ 1.63
SCO1-203ENST00000577427 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms