RNA–Protein interactions for RNA: ENST00000576677.5

TBCD-222, Transcript of tubulin folding cofactor D, human

TSL 1 (best)

Gene TBCD, Length 1,926 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBCD-222	ENST00000576677	ITSN1	Q15811	1721 aa		28.97	■■■□□ 2.23
TBCD-222	ENST00000576677	PNPLA6	Q8IY17	1366 aa		28.95	■■■□□ 2.23
TBCD-222	ENST00000576677	ANKLE2	Q86XL3	938 aa		28.95	■■■□□ 2.23
TBCD-222	ENST00000576677	SLFN5	Q08AF3	891 aa		28.94	■■■□□ 2.22
TBCD-222	ENST00000576677	SETD1B	Q9UPS6	1966 aa	Known RBP	28.94	■■■□□ 2.22
TBCD-222	ENST00000576677	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.93	■■■□□ 2.22
TBCD-222	ENST00000576677	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.93	■■■□□ 2.22
TBCD-222	ENST00000576677	PLEKHG3	A1L390	1219 aa		28.92	■■■□□ 2.22
TBCD-222	ENST00000576677	TRMT2A	Q8IZ69	625 aa	Known RBP	28.92	■■■□□ 2.22
TBCD-222	ENST00000576677	NME9	Q86XW9	330 aa		28.92	■■■□□ 2.22
TBCD-222	ENST00000576677	TCP11L2	Q8N4U5	519 aa		28.9	■■■□□ 2.22
TBCD-222	ENST00000576677	NKTR	P30414	1462 aa	Known RBP	28.9	■■■□□ 2.22
TBCD-222	ENST00000576677	KCNA6	P17658	529 aa		28.89	■■■□□ 2.22
TBCD-222	ENST00000576677		E9PSI1	815 aa		28.88	■■■□□ 2.21
TBCD-222	ENST00000576677	WWC1	Q8IX03	1113 aa		28.88	■■■□□ 2.21
TBCD-222	ENST00000576677	ACE	P12821	1306 aa		28.88	■■■□□ 2.21
TBCD-222	ENST00000576677	POLK	Q9UBT6	870 aa		28.88	■■■□□ 2.21
TBCD-222	ENST00000576677	NRK	Q7Z2Y5	1582 aa		28.87	■■■□□ 2.21
TBCD-222	ENST00000576677	NUTM2F	A1L443	756 aa		28.87	■■■□□ 2.21
TBCD-222	ENST00000576677	AATK	Q6ZMQ8	1374 aa		28.87	■■■□□ 2.21
TBCD-222	ENST00000576677	DIAPH1	O60610	1272 aa	Known RBP	28.86	■■■□□ 2.21
TBCD-222	ENST00000576677	NCBP3	Q53F19	620 aa	Known RBP	28.86	■■■□□ 2.21
TBCD-222	ENST00000576677	COG3	Q96JB2	828 aa		28.86	■■■□□ 2.21
TBCD-222	ENST00000576677	PHF23	Q9BUL5	403 aa	Predicted RBP	28.86	■■■□□ 2.21
TBCD-222	ENST00000576677	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.86	■■■□□ 2.21
TBCD-222	ENST00000576677	U2SURP	O15042	1029 aa	Known RBP	28.85	■■■□□ 2.21
TBCD-222	ENST00000576677	USP6	P35125	1406 aa		28.84	■■■□□ 2.21
TBCD-222	ENST00000576677	CCDC27	Q2M243	656 aa		28.84	■■■□□ 2.21
TBCD-222	ENST00000576677	ZRANB1	Q9UGI0	708 aa		28.84	■■■□□ 2.21
TBCD-222	ENST00000576677	B4GALNT3	Q6L9W6	998 aa		28.83	■■■□□ 2.21
TBCD-222	ENST00000576677	DMRT2	Q9Y5R5	561 aa		28.83	■■■□□ 2.21
TBCD-222	ENST00000576677	TTC21B	Q7Z4L5	1316 aa		28.83	■■■□□ 2.21
TBCD-222	ENST00000576677	FBLN1	P23142	703 aa		28.82	■■■□□ 2.2
TBCD-222	ENST00000576677	RRP7A	Q9Y3A4	280 aa	Known RBP	28.82	■■■□□ 2.2
TBCD-222	ENST00000576677	NEUROD2	Q15784	382 aa		28.82	■■■□□ 2.2
TBCD-222	ENST00000576677	PLEKHF1	Q96S99	279 aa		28.81	■■■□□ 2.2
TBCD-222	ENST00000576677	CHD2	O14647	1828 aa	Known RBP	28.8	■■■□□ 2.2
TBCD-222	ENST00000576677	MAP2	P11137	1827 aa	Known RBP	28.8	■■■□□ 2.2
TBCD-222	ENST00000576677	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.8	■■■□□ 2.2
TBCD-222	ENST00000576677	ANKAR	Q7Z5J8	1434 aa		28.8	■■■□□ 2.2
TBCD-222	ENST00000576677	PPM1G	O15355	546 aa	Predicted RBP	28.79	■■■□□ 2.2
TBCD-222	ENST00000576677	WDR63	Q8IWG1	891 aa		28.78	■■■□□ 2.2
TBCD-222	ENST00000576677	EMILIN1	Q9Y6C2	1016 aa		28.78	■■■□□ 2.2
TBCD-222	ENST00000576677	SSH2	Q76I76	1423 aa		28.78	■■■□□ 2.2
TBCD-222	ENST00000576677	NPHP4	O75161	1426 aa	Predicted RBP	28.77	■■■□□ 2.2
TBCD-222	ENST00000576677	OVOS2	A0A0J9YW53	1432 aa		28.76	■■■□□ 2.19
TBCD-222	ENST00000576677	OVOS2	Q6IE36	1432 aa		28.76	■■■□□ 2.19
TBCD-222	ENST00000576677	PNN	Q9H307	717 aa	Known RBP	28.75	■■■□□ 2.19
TBCD-222	ENST00000576677	MAPK8IP3	Q9UPT6	1336 aa		28.74	■■■□□ 2.19
TBCD-222	ENST00000576677	PLIN1	O60240	522 aa		28.74	■■■□□ 2.19
TBCD-222	ENST00000576677	TSHZ2	Q9NRE2	1034 aa		28.74	■■■□□ 2.19
TBCD-222	ENST00000576677	FMN2	Q9NZ56	1722 aa		28.74	■■■□□ 2.19
TBCD-222	ENST00000576677	PMFBP1	Q8TBY8	1022 aa		28.73	■■■□□ 2.19
TBCD-222	ENST00000576677	FCHSD2	O94868	740 aa		28.73	■■■□□ 2.19
TBCD-222	ENST00000576677	EXOC6	Q8TAG9	804 aa		28.73	■■■□□ 2.19
TBCD-222	ENST00000576677	CCDC136	Q96JN2	1154 aa		28.73	■■■□□ 2.19
TBCD-222	ENST00000576677	TTC21A	Q8NDW8	1320 aa		28.73	■■■□□ 2.19
TBCD-222	ENST00000576677	RGPD8	O14715	1765 aa	Predicted RBP	28.72	■■■□□ 2.19
TBCD-222	ENST00000576677	TMPO	P42166	694 aa	Known RBP	28.71	■■■□□ 2.19
TBCD-222	ENST00000576677	RRS1	Q15050	365 aa	Known RBP	28.71	■■■□□ 2.19
TBCD-222	ENST00000576677	NGDN	Q8NEJ9	315 aa	Known RBP	28.71	■■■□□ 2.19
TBCD-222	ENST00000576677	LRRC7	Q96NW7	1537 aa		28.7	■■■□□ 2.19
TBCD-222	ENST00000576677	NALCN	Q8IZF0	1738 aa		28.7	■■■□□ 2.18
TBCD-222	ENST00000576677	IL13	P35225	146 aa		28.69	■■■□□ 2.18
TBCD-222	ENST00000576677	USP31	Q70CQ4	1352 aa		28.68	■■■□□ 2.18
TBCD-222	ENST00000576677	RSPH6A	Q9H0K4	717 aa		28.68	■■■□□ 2.18
TBCD-222	ENST00000576677	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.67	■■■□□ 2.18
TBCD-222	ENST00000576677	ADGRL3	Q9HAR2	1447 aa		28.64	■■■□□ 2.18
TBCD-222	ENST00000576677	PRKAR2B	P31323	418 aa		28.63	■■■□□ 2.17
TBCD-222	ENST00000576677	MYH16	Q9H6N6	1097 aa		28.63	■■■□□ 2.17
TBCD-222	ENST00000576677	TRIM35	Q9UPQ4	493 aa		28.63	■■■□□ 2.17
TBCD-222	ENST00000576677	NEFM	P07197	916 aa		28.61	■■■□□ 2.17
TBCD-222	ENST00000576677	C20orf194	Q5TEA3	1177 aa		28.61	■■■□□ 2.17
TBCD-222	ENST00000576677	CRBN	Q96SW2	442 aa		28.61	■■■□□ 2.17
TBCD-222	ENST00000576677	NWD1	Q149M9	1564 aa		28.61	■■■□□ 2.17
TBCD-222	ENST00000576677	RIPK4	P57078	832 aa		28.6	■■■□□ 2.17
TBCD-222	ENST00000576677	HMOX1	P09601	288 aa		28.59	■■■□□ 2.17
TBCD-222	ENST00000576677	PIK3C2A	O00443	1686 aa		28.58	■■■□□ 2.17
TBCD-222	ENST00000576677	BCAR3	O75815	825 aa		28.58	■■■□□ 2.17
TBCD-222	ENST00000576677	RBM33	Q96EV2	1170 aa	Known RBP	28.58	■■■□□ 2.17
TBCD-222	ENST00000576677	IL16	Q14005	1332 aa		28.57	■■■□□ 2.16
TBCD-222	ENST00000576677	PHF8	Q9UPP1	1060 aa		28.55	■■■□□ 2.16
TBCD-222	ENST00000576677	PEAK1	Q9H792	1746 aa		28.55	■■■□□ 2.16
TBCD-222	ENST00000576677	EIF4A2	Q14240	407 aa	Known RBP	28.53	■■■□□ 2.16
TBCD-222	ENST00000576677	PHACTR3	Q96KR7	559 aa		28.53	■■■□□ 2.16
TBCD-222	ENST00000576677	FANCI	Q9NVI1	1328 aa		28.53	■■■□□ 2.16
TBCD-222	ENST00000576677	NFE2L2	Q16236	605 aa		28.53	■■■□□ 2.16
TBCD-222	ENST00000576677	RARS	P54136	660 aa	Known RBP	28.51	■■■□□ 2.16
TBCD-222	ENST00000576677	MAP3K19	Q56UN5	1328 aa		28.51	■■■□□ 2.15
TBCD-222	ENST00000576677	USP54	Q70EL1	1684 aa		28.51	■■■□□ 2.15
TBCD-222	ENST00000576677	SOX12	O15370	315 aa		28.5	■■■□□ 2.15
TBCD-222	ENST00000576677	CT47B1	P0C2W7	299 aa	Predicted RBP	28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	NLRP6	P59044	892 aa		28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	SBNO1	A3KN83	1393 aa		28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	HSP90AB2P	Q58FF8	381 aa		28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	C14orf37	Q86TY3	774 aa		28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	TSR2	Q969E8	191 aa	Known RBP	28.49	■■■□□ 2.15
TBCD-222	ENST00000576677	FLT4	P35916	1363 aa		28.48	■■■□□ 2.15
TBCD-222	ENST00000576677	MARF1	Q9Y4F3	1742 aa	Known RBP	28.46	■■■□□ 2.15
TBCD-222	ENST00000576677	PDE3A	Q14432	1141 aa		28.45	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms