RNA–Protein interactions for RNA: ENST00000576585.1

PRPF8-214, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 2,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-214ENST00000576585 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
PRPF8-214ENST00000576585 MED14O60244 1454 aa17.27■□□□□ 0.36
PRPF8-214ENST00000576585 ALKQ9UM73 1620 aa17.27■□□□□ 0.35
PRPF8-214ENST00000576585 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
PRPF8-214ENST00000576585 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
PRPF8-214ENST00000576585 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
PRPF8-214ENST00000576585 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
PRPF8-214ENST00000576585 HSPA2P54652 639 aa17.25■□□□□ 0.35
PRPF8-214ENST00000576585 ADGRB1O14514 1584 aa17.24■□□□□ 0.35
PRPF8-214ENST00000576585 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
PRPF8-214ENST00000576585 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
PRPF8-214ENST00000576585 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
PRPF8-214ENST00000576585 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
PRPF8-214ENST00000576585 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
PRPF8-214ENST00000576585 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
PRPF8-214ENST00000576585 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
PRPF8-214ENST00000576585 DIP2AQ14689 1571 aa17.21■□□□□ 0.35
PRPF8-214ENST00000576585 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
PRPF8-214ENST00000576585 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.34
PRPF8-214ENST00000576585 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.34
PRPF8-214ENST00000576585 TMF1P82094 1093 aa17.2■□□□□ 0.34
PRPF8-214ENST00000576585 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
PRPF8-214ENST00000576585 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
PRPF8-214ENST00000576585 EXOC8Q8IYI6 725 aa17.19■□□□□ 0.34
PRPF8-214ENST00000576585 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
PRPF8-214ENST00000576585 METP08581 1390 aa17.18■□□□□ 0.34
PRPF8-214ENST00000576585 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
PRPF8-214ENST00000576585 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
PRPF8-214ENST00000576585 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
PRPF8-214ENST00000576585 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
PRPF8-214ENST00000576585 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
PRPF8-214ENST00000576585 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
PRPF8-214ENST00000576585 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
PRPF8-214ENST00000576585 YTHDC2Q9H6S0 1430 aaKnown RBP17.15■□□□□ 0.34
PRPF8-214ENST00000576585 LRPPRCP42704 1394 aaKnown RBP17.14■□□□□ 0.34
PRPF8-214ENST00000576585 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.33
PRPF8-214ENST00000576585 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.33
PRPF8-214ENST00000576585 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
PRPF8-214ENST00000576585 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
PRPF8-214ENST00000576585 PHF14O94880 888 aa17.13■□□□□ 0.33
PRPF8-214ENST00000576585 TMTC2Q8N394 836 aa17.13■□□□□ 0.33
PRPF8-214ENST00000576585 ABCC11Q96J66 1382 aa17.13■□□□□ 0.33
PRPF8-214ENST00000576585 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
PRPF8-214ENST00000576585 KNDC1Q76NI1 1749 aa17.12■□□□□ 0.33
PRPF8-214ENST00000576585 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
PRPF8-214ENST00000576585 CLGNO14967 610 aa17.12■□□□□ 0.33
PRPF8-214ENST00000576585 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
PRPF8-214ENST00000576585 TECPR2O15040 1411 aa17.11■□□□□ 0.33
PRPF8-214ENST00000576585 STK26Q9P289 416 aa17.11■□□□□ 0.33
PRPF8-214ENST00000576585 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
PRPF8-214ENST00000576585 XRN1Q8IZH2 1706 aaKnown RBP17.1■□□□□ 0.33
PRPF8-214ENST00000576585 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
PRPF8-214ENST00000576585 SIRT1Q96EB6 747 aa17.1■□□□□ 0.33
PRPF8-214ENST00000576585 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
PRPF8-214ENST00000576585 PANK3Q9H999 370 aa17.09■□□□□ 0.33
PRPF8-214ENST00000576585 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.33
PRPF8-214ENST00000576585 CPS1P31327 1500 aa17.08■□□□□ 0.32
PRPF8-214ENST00000576585 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
PRPF8-214ENST00000576585 CDCA8Q53HL2 280 aa17.08■□□□□ 0.32
PRPF8-214ENST00000576585 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
PRPF8-214ENST00000576585 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
PRPF8-214ENST00000576585 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
PRPF8-214ENST00000576585 GZF1Q9H116 711 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-214ENST00000576585 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
PRPF8-214ENST00000576585 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
PRPF8-214ENST00000576585 MYOM1P52179 1685 aa17.06■□□□□ 0.32
PRPF8-214ENST00000576585 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRPF8-214ENST00000576585 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.321e-15■□□□□ 8.8
PRPF8-214ENST00000576585 KCNA6P17658 529 aa17.05■□□□□ 0.32
PRPF8-214ENST00000576585 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
PRPF8-214ENST00000576585 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
PRPF8-214ENST00000576585 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
PRPF8-214ENST00000576585 SGSM3Q96HU1 749 aa17.04■□□□□ 0.32
PRPF8-214ENST00000576585 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
PRPF8-214ENST00000576585 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
PRPF8-214ENST00000576585 PRAM1Q96QH2 718 aa17.02■□□□□ 0.31
PRPF8-214ENST00000576585 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
PRPF8-214ENST00000576585 WAPLQ7Z5K2 1190 aa17.01■□□□□ 0.31
PRPF8-214ENST00000576585 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
PRPF8-214ENST00000576585 MRS2Q9HD23 443 aa17■□□□□ 0.31
PRPF8-214ENST00000576585 NKTRP30414 1462 aaKnown RBP17■□□□□ 0.31
PRPF8-214ENST00000576585 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
PRPF8-214ENST00000576585 POGKQ9P215 609 aa16.99■□□□□ 0.31
PRPF8-214ENST00000576585 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
PRPF8-214ENST00000576585 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
PRPF8-214ENST00000576585 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
PRPF8-214ENST00000576585 BRD1O95696 1058 aa16.98■□□□□ 0.31
PRPF8-214ENST00000576585 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
PRPF8-214ENST00000576585 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
PRPF8-214ENST00000576585 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
PRPF8-214ENST00000576585 RALBP1Q15311 655 aa16.96■□□□□ 0.31
PRPF8-214ENST00000576585 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
PRPF8-214ENST00000576585 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
PRPF8-214ENST00000576585 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-214ENST00000576585 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
PRPF8-214ENST00000576585 NOL8Q76FK4 1167 aaKnown RBP16.95■□□□□ 0.3
PRPF8-214ENST00000576585 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
PRPF8-214ENST00000576585 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
PRPF8-214ENST00000576585 ADGRB2O60241 1585 aa16.95■□□□□ 0.3
PRPF8-214ENST00000576585 CARD14Q9BXL6 1004 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms