RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 GGNBP2Q9H3C7 697 aa18.73■□□□□ 0.59
TRAP1-210ENST00000574494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRAP1-210ENST00000574494 NGDNQ8NEJ9 315 aaKnown RBP18.72■□□□□ 0.59
TRAP1-210ENST00000574494 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
TRAP1-210ENST00000574494 COG3Q96JB2 828 aa18.71■□□□□ 0.59
TRAP1-210ENST00000574494 NUTM2FA1L443 756 aa18.7■□□□□ 0.58
TRAP1-210ENST00000574494 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
TRAP1-210ENST00000574494 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
TRAP1-210ENST00000574494 AATKQ6ZMQ8 1374 aa18.69■□□□□ 0.58
TRAP1-210ENST00000574494 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
TRAP1-210ENST00000574494 OVOS2A0A0J9YW53 1432 aa18.68■□□□□ 0.58
TRAP1-210ENST00000574494 OVOS2Q6IE36 1432 aa18.68■□□□□ 0.58
TRAP1-210ENST00000574494 SSH2Q76I76 1423 aa18.68■□□□□ 0.58
TRAP1-210ENST00000574494 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
TRAP1-210ENST00000574494 CDK12Q9NYV4 1490 aaPredicted RBP18.68■□□□□ 0.58
TRAP1-210ENST00000574494 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
TRAP1-210ENST00000574494 MTHFSP49914 203 aa18.67■□□□□ 0.58
TRAP1-210ENST00000574494 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
TRAP1-210ENST00000574494 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
TRAP1-210ENST00000574494 TMEM94Q12767 1356 aa18.67■□□□□ 0.58
TRAP1-210ENST00000574494 MSH6P52701 1360 aa18.66■□□□□ 0.58
TRAP1-210ENST00000574494 XIRP1Q702N8 1843 aaKnown RBP18.65■□□□□ 0.58
TRAP1-210ENST00000574494 NME9Q86XW9 330 aa18.65■□□□□ 0.58
TRAP1-210ENST00000574494 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
TRAP1-210ENST00000574494 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
TRAP1-210ENST00000574494 ATF3P18847 181 aa18.64■□□□□ 0.57
TRAP1-210ENST00000574494 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
TRAP1-210ENST00000574494 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
TRAP1-210ENST00000574494 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
TRAP1-210ENST00000574494 C1orf167Q5SNV9 1468 aa18.63■□□□□ 0.57
TRAP1-210ENST00000574494 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
TRAP1-210ENST00000574494 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
TRAP1-210ENST00000574494 MST1RQ04912 1400 aa18.6■□□□□ 0.57
TRAP1-210ENST00000574494 PNPLA6Q8IY17 1366 aa18.6■□□□□ 0.57
TRAP1-210ENST00000574494 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
TRAP1-210ENST00000574494 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
TRAP1-210ENST00000574494 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
TRAP1-210ENST00000574494 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
TRAP1-210ENST00000574494 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
TRAP1-210ENST00000574494 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
TRAP1-210ENST00000574494 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
TRAP1-210ENST00000574494 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
TRAP1-210ENST00000574494 PSME1Q06323 249 aa18.55■□□□□ 0.56
TRAP1-210ENST00000574494 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
TRAP1-210ENST00000574494 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
TRAP1-210ENST00000574494 U2AF1L5P0DN76 240 aaPredicted RBP18.54■□□□□ 0.56
TRAP1-210ENST00000574494 U2AF1Q01081 240 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRAP1-210ENST00000574494 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
TRAP1-210ENST00000574494 LTN1O94822 1766 aa18.53■□□□□ 0.56
TRAP1-210ENST00000574494 PAK3O75914 559 aaPredicted RBP18.53■□□□□ 0.56
TRAP1-210ENST00000574494 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
TRAP1-210ENST00000574494 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
TRAP1-210ENST00000574494 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
TRAP1-210ENST00000574494 NEFLP07196 543 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 NEFMP07197 916 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 NLRP6P59044 892 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 ALS2Q96Q42 1657 aa18.52■□□□□ 0.56
TRAP1-210ENST00000574494 SBNO1A3KN83 1393 aa18.52■□□□□ 0.55
TRAP1-210ENST00000574494 RTL1A6NKG5 1358 aa18.52■□□□□ 0.55
TRAP1-210ENST00000574494 FLT4P35916 1363 aa18.52■□□□□ 0.55
TRAP1-210ENST00000574494 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
TRAP1-210ENST00000574494 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
TRAP1-210ENST00000574494 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
TRAP1-210ENST00000574494 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
TRAP1-210ENST00000574494 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
TRAP1-210ENST00000574494 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
TRAP1-210ENST00000574494 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
TRAP1-210ENST00000574494 SLIT3O75094 1523 aa18.49■□□□□ 0.55
TRAP1-210ENST00000574494 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
TRAP1-210ENST00000574494 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
TRAP1-210ENST00000574494 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
TRAP1-210ENST00000574494 NFAT5O94916 1531 aa18.48■□□□□ 0.55
TRAP1-210ENST00000574494 RGPD1P0DJD0 1748 aa18.47■□□□□ 0.55
TRAP1-210ENST00000574494 RRS1Q15050 365 aaKnown RBP18.47■□□□□ 0.55
TRAP1-210ENST00000574494 APAF1O14727 1248 aa18.46■□□□□ 0.55
TRAP1-210ENST00000574494 FOXO3O43524 673 aa18.45■□□□□ 0.54
TRAP1-210ENST00000574494 FCHSD2O94868 740 aa18.45■□□□□ 0.54
TRAP1-210ENST00000574494 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
TRAP1-210ENST00000574494 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
TRAP1-210ENST00000574494 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
TRAP1-210ENST00000574494 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
TRAP1-210ENST00000574494 AMPHP49418 695 aa18.44■□□□□ 0.54
TRAP1-210ENST00000574494 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
TRAP1-210ENST00000574494 ARHGEF10O15013 1369 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 NHSL1Q5SYE7 1610 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 IL13P35225 146 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 PXDNQ92626 1479 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 ZNF521Q96K83 1311 aa18.43■□□□□ 0.54
TRAP1-210ENST00000574494 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
TRAP1-210ENST00000574494 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
TRAP1-210ENST00000574494 ABCC6O95255 1503 aa18.42■□□□□ 0.54
TRAP1-210ENST00000574494 USP19O94966 1318 aa18.42■□□□□ 0.54
TRAP1-210ENST00000574494 SOX12O15370 315 aa18.41■□□□□ 0.54
TRAP1-210ENST00000574494 E9PSI1 815 aa18.39■□□□□ 0.53
TRAP1-210ENST00000574494 FBLN1P23142 703 aa18.39■□□□□ 0.53
TRAP1-210ENST00000574494 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
TRAP1-210ENST00000574494 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms